RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 BRINP3Q76B58 766 aa14.32□□□□□ -0.12
SP140-208ENST00000473711 CHADLQ6NUI6 762 aa14.31□□□□□ -0.12
SP140-208ENST00000473711 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
SP140-208ENST00000473711 NUDCQ9Y266 331 aa14.3□□□□□ -0.12
SP140-208ENST00000473711 NPHP3Q7Z494 1330 aa14.3□□□□□ -0.12
SP140-208ENST00000473711 LTBP4Q8N2S1 1624 aa14.3□□□□□ -0.12
SP140-208ENST00000473711 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
SP140-208ENST00000473711 U2SURPO15042 1029 aaKnown RBP14.29□□□□□ -0.12
SP140-208ENST00000473711 DIAPH1O60610 1272 aaKnown RBP14.29□□□□□ -0.12
SP140-208ENST00000473711 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
SP140-208ENST00000473711 U2AF1L5P0DN76 240 aaPredicted RBP14.28□□□□□ -0.12
SP140-208ENST00000473711 U2AF1Q01081 240 aaKnown RBP eCLIP14.28□□□□□ -0.12
SP140-208ENST00000473711 PNPLA6Q8IY17 1366 aa14.28□□□□□ -0.12
SP140-208ENST00000473711 CCDC146Q8IYE0 955 aa14.28□□□□□ -0.12
SP140-208ENST00000473711 SALL2Q9Y467 1007 aaPredicted RBP14.28□□□□□ -0.12
SP140-208ENST00000473711 INSRP06213 1382 aa14.27□□□□□ -0.12
SP140-208ENST00000473711 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.13
SP140-208ENST00000473711 MAP3K19Q56UN5 1328 aa14.26□□□□□ -0.13
SP140-208ENST00000473711 AMPHP49418 695 aa14.26□□□□□ -0.13
SP140-208ENST00000473711 COL3A1P02461 1466 aaPredicted RBP14.25□□□□□ -0.13
SP140-208ENST00000473711 BLMP54132 1417 aaPredicted RBP14.25□□□□□ -0.13
SP140-208ENST00000473711 SMG6Q86US8 1419 aaKnown RBP14.25□□□□□ -0.13
SP140-208ENST00000473711 SBNO1A3KN83 1393 aa14.25□□□□□ -0.13
SP140-208ENST00000473711 ZBED9Q6R2W3 1325 aa14.25□□□□□ -0.13
SP140-208ENST00000473711 IL13P35225 146 aa14.25□□□□□ -0.13
SP140-208ENST00000473711 ZBTB7CA1YPR0 619 aa14.24□□□□□ -0.13
SP140-208ENST00000473711 HSP90AB2PQ58FF8 381 aa14.24□□□□□ -0.13
SP140-208ENST00000473711 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
SP140-208ENST00000473711 TRPM3Q9HCF6 1732 aaPredicted RBP14.24□□□□□ -0.13
SP140-208ENST00000473711 SPATA31A3Q5VYP0 1347 aa14.23□□□□□ -0.13
SP140-208ENST00000473711 GCP02774 474 aa14.23□□□□□ -0.13
SP140-208ENST00000473711 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
SP140-208ENST00000473711 CDK12Q9NYV4 1490 aaPredicted RBP14.23□□□□□ -0.13
SP140-208ENST00000473711 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
SP140-208ENST00000473711 MED1Q15648 1581 aaPredicted RBP14.22□□□□□ -0.13
SP140-208ENST00000473711 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
SP140-208ENST00000473711 APAF1O14727 1248 aa14.22□□□□□ -0.13
SP140-208ENST00000473711 EIF4A2Q14240 407 aaKnown RBP14.22□□□□□ -0.13
SP140-208ENST00000473711 PXDNQ92626 1479 aa14.22□□□□□ -0.13
SP140-208ENST00000473711 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.13
SP140-208ENST00000473711 USP19O94966 1318 aa14.21□□□□□ -0.13
SP140-208ENST00000473711 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.13
SP140-208ENST00000473711 TNS3Q68CZ2 1445 aa14.21□□□□□ -0.13
SP140-208ENST00000473711 USP54Q70EL1 1684 aa14.2□□□□□ -0.14
SP140-208ENST00000473711 HMOX1P09601 288 aa14.2□□□□□ -0.14
SP140-208ENST00000473711 HOXC9P31274 260 aa14.2□□□□□ -0.14
SP140-208ENST00000473711 CABLES1Q8TDN4 633 aa14.2□□□□□ -0.14
SP140-208ENST00000473711 FLT4P35916 1363 aa14.2□□□□□ -0.14
SP140-208ENST00000473711 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
SP140-208ENST00000473711 TOM1O60784 492 aa14.19□□□□□ -0.14
SP140-208ENST00000473711 FCHSD2O94868 740 aa14.19□□□□□ -0.14
SP140-208ENST00000473711 EVX2Q03828 476 aa14.19□□□□□ -0.14
SP140-208ENST00000473711 ARHGEF25Q86VW2 580 aa14.19□□□□□ -0.14
SP140-208ENST00000473711 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
SP140-208ENST00000473711 IP6K1Q92551 441 aa14.19□□□□□ -0.14
SP140-208ENST00000473711 PNNQ9H307 717 aaKnown RBP14.19□□□□□ -0.14
SP140-208ENST00000473711 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
SP140-208ENST00000473711 ZC3H6P61129 1189 aaKnown RBP14.18□□□□□ -0.14
SP140-208ENST00000473711 PIP4K2BP78356 416 aa14.18□□□□□ -0.14
SP140-208ENST00000473711 LTV1Q96GA3 475 aaPredicted RBP14.18□□□□□ -0.14
SP140-208ENST00000473711 PLEKHF1Q96S99 279 aa14.18□□□□□ -0.14
SP140-208ENST00000473711 RRP7AQ9Y3A4 280 aaKnown RBP14.18□□□□□ -0.14
SP140-208ENST00000473711 ARHGEF10O15013 1369 aa14.18□□□□□ -0.14
SP140-208ENST00000473711 ALS2Q96Q42 1657 aa14.17□□□□□ -0.14
SP140-208ENST00000473711 SLIT3O75094 1523 aa14.17□□□□□ -0.14
SP140-208ENST00000473711 NFAT5O94916 1531 aa14.17□□□□□ -0.14
SP140-208ENST00000473711 PRKAR2BP31323 418 aa14.17□□□□□ -0.14
SP140-208ENST00000473711 NEUROD2Q15784 382 aa14.17□□□□□ -0.14
SP140-208ENST00000473711 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
SP140-208ENST00000473711 KIF24Q5T7B8 1368 aa14.17□□□□□ -0.14
SP140-208ENST00000473711 UBAP1LF5GYI3 381 aa14.16□□□□□ -0.14
SP140-208ENST00000473711 SULT6B1Q6IMI4 303 aa14.16□□□□□ -0.14
SP140-208ENST00000473711 MAPK8IP3Q9UPT6 1336 aa14.15□□□□□ -0.14
SP140-208ENST00000473711 NEFMP07197 916 aa14.15□□□□□ -0.14
SP140-208ENST00000473711 AEBP1Q8IUX7 1158 aa14.15□□□□□ -0.14
SP140-208ENST00000473711 EYA1Q99502 592 aa14.15□□□□□ -0.14
SP140-208ENST00000473711 RTL1A6NKG5 1358 aa14.14□□□□□ -0.15
SP140-208ENST00000473711 HAP1P54257 671 aaPredicted RBP14.14□□□□□ -0.15
SP140-208ENST00000473711 NGEFQ8N5V2 710 aa14.14□□□□□ -0.15
SP140-208ENST00000473711 LRRC59Q96AG4 307 aaKnown RBP14.14□□□□□ -0.15
SP140-208ENST00000473711 CDCA7LQ96GN5 454 aa14.14□□□□□ -0.15
SP140-208ENST00000473711 PHACTR3Q96KR7 559 aa14.14□□□□□ -0.15
SP140-208ENST00000473711 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
SP140-208ENST00000473711 TMPOP42166 694 aaKnown RBP14.13□□□□□ -0.15
SP140-208ENST00000473711 PDE3BQ13370 1112 aa14.13□□□□□ -0.15
SP140-208ENST00000473711 AXIN2Q9Y2T1 843 aa14.13□□□□□ -0.15
SP140-208ENST00000473711 ROBO1Q9Y6N7 1651 aa14.13□□□□□ -0.15
SP140-208ENST00000473711 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
SP140-208ENST00000473711 CHRNA2Q15822 529 aa14.12□□□□□ -0.15
SP140-208ENST00000473711 ZNF521Q96K83 1311 aa14.12□□□□□ -0.15
SP140-208ENST00000473711 RIPK4P57078 832 aa14.11□□□□□ -0.15
SP140-208ENST00000473711 GOLGA2Q08379 1002 aa14.11□□□□□ -0.15
SP140-208ENST00000473711 WWC1Q8IX03 1113 aa14.11□□□□□ -0.15
SP140-208ENST00000473711 ANKRD24Q8TF21 1146 aa14.11□□□□□ -0.15
SP140-208ENST00000473711 LTN1O94822 1766 aa14.11□□□□□ -0.15
SP140-208ENST00000473711 PROM2Q8N271 834 aa14.1□□□□□ -0.15
SP140-208ENST00000473711 USHBP1Q8N6Y0 703 aa14.1□□□□□ -0.15
SP140-208ENST00000473711 IGSF1Q8N6C5 1336 aa14.1□□□□□ -0.15
SP140-208ENST00000473711 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
SP140-208ENST00000473711 NFE2L2Q16236 605 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms