RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 ABCC6O95255 1503 aa12.59□□□□□ -0.39
CHEK2-223ENST00000472807 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
CHEK2-223ENST00000472807 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
CHEK2-223ENST00000472807 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
CHEK2-223ENST00000472807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHEK2-223ENST00000472807 CD163L1Q9NR16 1453 aa12.59□□□□□ -0.39
CHEK2-223ENST00000472807 NINLQ9Y2I6 1382 aa12.58□□□□□ -0.4
CHEK2-223ENST00000472807 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
CHEK2-223ENST00000472807 SLC24A1O60721 1099 aa12.58□□□□□ -0.4
CHEK2-223ENST00000472807 TRIM37O94972 964 aa12.58□□□□□ -0.4
CHEK2-223ENST00000472807 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
CHEK2-223ENST00000472807 EDC4Q6P2E9 1401 aaKnown RBP12.58□□□□□ -0.4
CHEK2-223ENST00000472807 PUS7Q96PZ0 661 aaKnown RBP12.58□□□□□ -0.4
CHEK2-223ENST00000472807 TERF2IPQ9NYB0 399 aa12.58□□□□□ -0.4
CHEK2-223ENST00000472807 WDR17Q8IZU2 1322 aa12.58□□□□□ -0.4
CHEK2-223ENST00000472807 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
CHEK2-223ENST00000472807 USP31Q70CQ4 1352 aa12.57□□□□□ -0.4
CHEK2-223ENST00000472807 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
CHEK2-223ENST00000472807 LRRC37A3O60309 1634 aa12.57□□□□□ -0.4
CHEK2-223ENST00000472807 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
CHEK2-223ENST00000472807 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
CHEK2-223ENST00000472807 ST20-MTHFSA0A0A6YYL1 179 aa12.56□□□□□ -0.4
CHEK2-223ENST00000472807 C11orf95C9JLR9 678 aaPredicted RBP12.56□□□□□ -0.4
CHEK2-223ENST00000472807 NME9Q86XW9 330 aa12.56□□□□□ -0.4
CHEK2-223ENST00000472807 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
CHEK2-223ENST00000472807 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
CHEK2-223ENST00000472807 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
CHEK2-223ENST00000472807 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
CHEK2-223ENST00000472807 OVOS2A0A0G2JMS6 1433 aa12.55□□□□□ -0.4
CHEK2-223ENST00000472807 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
CHEK2-223ENST00000472807 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
CHEK2-223ENST00000472807 APBA3O96018 575 aa12.55□□□□□ -0.4
CHEK2-223ENST00000472807 TESK2Q96S53 571 aa12.55□□□□□ -0.4
CHEK2-223ENST00000472807 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
CHEK2-223ENST00000472807 LTN1O94822 1766 aa12.54□□□□□ -0.4
CHEK2-223ENST00000472807 DDB1Q16531 1140 aa12.54□□□□□ -0.4
CHEK2-223ENST00000472807 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
CHEK2-223ENST00000472807 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
CHEK2-223ENST00000472807 USP47Q96K76 1375 aa12.54□□□□□ -0.4
CHEK2-223ENST00000472807 LRP5O75197 1615 aa12.53□□□□□ -0.4
CHEK2-223ENST00000472807 PSDA5PKW4 1024 aaPredicted RBP12.53□□□□□ -0.4
CHEK2-223ENST00000472807 EZH2Q15910 746 aaKnown RBP12.53□□□□□ -0.4
CHEK2-223ENST00000472807 PEAK1Q9H792 1746 aa12.53□□□□□ -0.4
CHEK2-223ENST00000472807 CCDC7Q96M83 1385 aa12.53□□□□□ -0.4
CHEK2-223ENST00000472807 RREB1Q92766 1687 aa12.52□□□□□ -0.4
CHEK2-223ENST00000472807 CAMKK2Q96RR4 588 aa12.52□□□□□ -0.41
CHEK2-223ENST00000472807 TMF1P82094 1093 aa12.51□□□□□ -0.41
CHEK2-223ENST00000472807 R3HDM1Q15032 1099 aaKnown RBP12.5□□□□□ -0.41
CHEK2-223ENST00000472807 TIMELESSQ9UNS1 1208 aa12.5□□□□□ -0.41
CHEK2-223ENST00000472807 ERBB3P21860 1342 aa12.5□□□□□ -0.41
CHEK2-223ENST00000472807 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
CHEK2-223ENST00000472807 ANKRD36BQ8N2N9 1353 aa12.5□□□□□ -0.41
CHEK2-223ENST00000472807 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
CHEK2-223ENST00000472807 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
CHEK2-223ENST00000472807 SBF2Q86WG5 1849 aa12.5□□□□□ -0.41
CHEK2-223ENST00000472807 RGPD3A6NKT7 1758 aaPredicted RBP12.49□□□□□ -0.41
CHEK2-223ENST00000472807 RGPD4Q7Z3J3 1758 aa12.49□□□□□ -0.41
CHEK2-223ENST00000472807 CDCA8Q53HL2 280 aa12.49□□□□□ -0.41
CHEK2-223ENST00000472807 COG3Q96JB2 828 aa12.49□□□□□ -0.41
CHEK2-223ENST00000472807 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
CHEK2-223ENST00000472807 BCL9O00512 1426 aa12.48□□□□□ -0.41
CHEK2-223ENST00000472807 EXOC5O00471 708 aa12.48□□□□□ -0.41
CHEK2-223ENST00000472807 ANKRD24Q8TF21 1146 aa12.48□□□□□ -0.41
CHEK2-223ENST00000472807 PCGF6Q9BYE7 350 aa12.48□□□□□ -0.41
CHEK2-223ENST00000472807 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
CHEK2-223ENST00000472807 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
CHEK2-223ENST00000472807 MARCH10Q8NA82 808 aaPredicted RBP12.47□□□□□ -0.41
CHEK2-223ENST00000472807 BCL11BQ9C0K0 894 aaPredicted RBP12.47□□□□□ -0.41
CHEK2-223ENST00000472807 FAM208AQ9UK61 1670 aaKnown RBP12.47□□□□□ -0.41
CHEK2-223ENST00000472807 IL2RBP14784 551 aa12.45□□□□□ -0.42
CHEK2-223ENST00000472807 IP6K1Q92551 441 aa12.45□□□□□ -0.42
CHEK2-223ENST00000472807 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
CHEK2-223ENST00000472807 PLSCR1O15162 318 aa12.44□□□□□ -0.42
CHEK2-223ENST00000472807 RTL1A6NKG5 1358 aa12.43□□□□□ -0.42
CHEK2-223ENST00000472807 MAP3K19Q56UN5 1328 aa12.43□□□□□ -0.42
CHEK2-223ENST00000472807 MYOM1P52179 1685 aa12.43□□□□□ -0.42
CHEK2-223ENST00000472807 AMPHP49418 695 aa12.43□□□□□ -0.42
CHEK2-223ENST00000472807 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
CHEK2-223ENST00000472807 HOXC9P31274 260 aa12.42□□□□□ -0.42
CHEK2-223ENST00000472807 LTV1Q96GA3 475 aaPredicted RBP12.42□□□□□ -0.42
CHEK2-223ENST00000472807 FYB1O15117 783 aa12.41□□□□□ -0.42
CHEK2-223ENST00000472807 PTF1AQ7RTS3 328 aa12.41□□□□□ -0.42
CHEK2-223ENST00000472807 SMG6Q86US8 1419 aaKnown RBP12.41□□□□□ -0.42
CHEK2-223ENST00000472807 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
CHEK2-223ENST00000472807 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
CHEK2-223ENST00000472807 KAT6BQ8WYB5 2073 aa12.4□□□□□ -0.42
CHEK2-223ENST00000472807 NSD3Q9BZ95 1437 aa12.39□□□□□ -0.43
CHEK2-223ENST00000472807 RRS1Q15050 365 aaKnown RBP12.39□□□□□ -0.43
CHEK2-223ENST00000472807 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
CHEK2-223ENST00000472807 KCNQ2O43526 872 aa12.38□□□□□ -0.43
CHEK2-223ENST00000472807 FBLN1P23142 703 aa12.38□□□□□ -0.43
CHEK2-223ENST00000472807 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
CHEK2-223ENST00000472807 BTAF1O14981 1849 aa12.37□□□□□ -0.43
CHEK2-223ENST00000472807 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
CHEK2-223ENST00000472807 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
CHEK2-223ENST00000472807 ANO8Q9HCE9 1232 aaPredicted RBP12.37□□□□□ -0.43
CHEK2-223ENST00000472807 FLT4P35916 1363 aa12.37□□□□□ -0.43
CHEK2-223ENST00000472807 KIF24Q5T7B8 1368 aa12.37□□□□□ -0.43
CHEK2-223ENST00000472807 PROM2Q8N271 834 aa12.36□□□□□ -0.43
CHEK2-223ENST00000472807 DDX54Q8TDD1 881 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms