RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CHRNA4P43681 627 aa3.87□□□□□ -1.79
UBXN4-207ENST00000471246 LAMC2Q13753 1193 aa3.87□□□□□ -1.79
UBXN4-207ENST00000471246 ARID5BQ14865 1188 aa3.87□□□□□ -1.79
UBXN4-207ENST00000471246 FAM174AQ8TBP5 190 aa3.87□□□□□ -1.79
UBXN4-207ENST00000471246 KRTAP4-5Q9BYR2 181 aa3.87□□□□□ -1.79
UBXN4-207ENST00000471246 CCNYL3P0C7X3 344 aa3.86□□□□□ -1.79
UBXN4-207ENST00000471246 YBX3P16989 372 aaKnown RBP eCLIP3.86□□□□□ -1.79
UBXN4-207ENST00000471246 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
UBXN4-207ENST00000471246 SUV39H2Q9H5I1 410 aa3.86□□□□□ -1.79
UBXN4-207ENST00000471246 SPINT1O43278 529 aa3.85□□□□□ -1.79
UBXN4-207ENST00000471246 GUCA2AQ02747 115 aa3.85□□□□□ -1.79
UBXN4-207ENST00000471246 GRIN2CQ14957 1233 aa3.85□□□□□ -1.79
UBXN4-207ENST00000471246 PHOX2BQ99453 314 aa3.85□□□□□ -1.79
UBXN4-207ENST00000471246 EVA1BQ9NVM1 165 aa3.85□□□□□ -1.79
UBXN4-207ENST00000471246 MKL2Q9ULH7 1088 aa3.85□□□□□ -1.79
UBXN4-207ENST00000471246 GPR25O00155 361 aa3.84□□□□□ -1.79
UBXN4-207ENST00000471246 OIP5O43482 229 aa3.84□□□□□ -1.79
UBXN4-207ENST00000471246 KDM4AO75164 1064 aa3.84□□□□□ -1.79
UBXN4-207ENST00000471246 RSPO4Q2I0M5 234 aaPredicted RBP3.84□□□□□ -1.79
UBXN4-207ENST00000471246 LRRC4BQ9NT99 713 aa3.84□□□□□ -1.79
UBXN4-207ENST00000471246 MS4A1P11836 297 aa3.83□□□□□ -1.8
UBXN4-207ENST00000471246 CD46P15529 392 aa3.83□□□□□ -1.8
UBXN4-207ENST00000471246 KCNH2Q12809 1159 aa3.83□□□□□ -1.8
UBXN4-207ENST00000471246 FZD5Q13467 585 aa3.83□□□□□ -1.8
UBXN4-207ENST00000471246 RBM26Q5T8P6 1007 aaKnown RBP3.83□□□□□ -1.8
UBXN4-207ENST00000471246 SMYD5Q6GMV2 418 aa3.83□□□□□ -1.8
UBXN4-207ENST00000471246 FOXJ1Q92949 421 aa3.83□□□□□ -1.8
UBXN4-207ENST00000471246 SHISA8B8ZZ34 492 aa3.82□□□□□ -1.8
UBXN4-207ENST00000471246 GPR37O15354 613 aa3.82□□□□□ -1.8
UBXN4-207ENST00000471246 HOXA2O43364 376 aa3.82□□□□□ -1.8
UBXN4-207ENST00000471246 CTSOP43234 321 aaPredicted RBP3.82□□□□□ -1.8
UBXN4-207ENST00000471246 NKAPLQ5M9Q1 402 aa3.82□□□□□ -1.8
UBXN4-207ENST00000471246 RETREG3Q86VR2 466 aa3.82□□□□□ -1.8
UBXN4-207ENST00000471246 HOXB4P17483 251 aaPredicted RBP3.81□□□□□ -1.8
UBXN4-207ENST00000471246 CBLBQ13191 982 aa3.81□□□□□ -1.8
UBXN4-207ENST00000471246 PTPRNQ16849 979 aa3.81□□□□□ -1.8
UBXN4-207ENST00000471246 C4orf48Q5BLP8 95 aa3.81□□□□□ -1.8
UBXN4-207ENST00000471246 MCTP1Q6DN14 999 aa3.81□□□□□ -1.8
UBXN4-207ENST00000471246 LINC00114Q6XXX2 140 aa3.81□□□□□ -1.8
UBXN4-207ENST00000471246 ZNF837Q96EG3 531 aaPredicted RBP3.81□□□□□ -1.8
UBXN4-207ENST00000471246 TXKP42681 527 aa3.8□□□□□ -1.8
UBXN4-207ENST00000471246 HIC1Q14526 733 aa3.8□□□□□ -1.8
UBXN4-207ENST00000471246 C1orf229Q6ZS94 237 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-207ENST00000471246 Q6ZVU0 165 aa3.8□□□□□ -1.8
UBXN4-207ENST00000471246 GPIHBP1Q8IV16 184 aa3.8□□□□□ -1.8
UBXN4-207ENST00000471246 TULP1O00294 542 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-207ENST00000471246 HYAL3O43820 417 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-207ENST00000471246 USP46P62068 366 aa3.79□□□□□ -1.8
UBXN4-207ENST00000471246 RNF217Q8TC41 542 aa3.79□□□□□ -1.8
UBXN4-207ENST00000471246 FMNL2Q96PY5 1086 aa3.79□□□□□ -1.8
UBXN4-207ENST00000471246 GNPATO15228 680 aa3.78□□□□□ -1.8
UBXN4-207ENST00000471246 DYRK3O43781 588 aa3.78□□□□□ -1.8
UBXN4-207ENST00000471246 FSHRP23945 695 aa3.78□□□□□ -1.8
UBXN4-207ENST00000471246 GATA4P43694 442 aa3.78□□□□□ -1.8
UBXN4-207ENST00000471246 LRP8Q14114 963 aa3.78□□□□□ -1.8
UBXN4-207ENST00000471246 INSM2Q96T92 566 aaPredicted RBP3.78□□□□□ -1.8
UBXN4-207ENST00000471246 RRAGCQ9HB90 399 aa3.78□□□□□ -1.8
UBXN4-207ENST00000471246 EMILIN1Q9Y6C2 1016 aa3.78□□□□□ -1.8
UBXN4-207ENST00000471246 PAX4O43316 350 aa3.77□□□□□ -1.81
UBXN4-207ENST00000471246 DBN1Q16643 649 aa3.77□□□□□ -1.81
UBXN4-207ENST00000471246 AGBL1Q96MI9 1066 aa3.77□□□□□ -1.81
UBXN4-207ENST00000471246 OXCT2Q9BYC2 517 aaPredicted RBP3.77□□□□□ -1.81
UBXN4-207ENST00000471246 PRSS36Q5K4E3 855 aa3.76□□□□□ -1.81
UBXN4-207ENST00000471246 TRIM22Q8IYM9 498 aa3.76□□□□□ -1.81
UBXN4-207ENST00000471246 CCDC116Q8IYX3 515 aa3.76□□□□□ -1.81
UBXN4-207ENST00000471246 COL17A1Q9UMD9 1497 aaPredicted RBP3.75□□□□□ -1.81
UBXN4-207ENST00000471246 SLC24A1O60721 1099 aa3.75□□□□□ -1.81
UBXN4-207ENST00000471246 MX2P20592 715 aa3.75□□□□□ -1.81
UBXN4-207ENST00000471246 GTPBP3Q969Y2 492 aaKnown RBP3.75□□□□□ -1.81
UBXN4-207ENST00000471246 GMCL1Q96IK5 515 aa3.75□□□□□ -1.81
UBXN4-207ENST00000471246 POLMQ9NP87 494 aaPredicted RBP3.75□□□□□ -1.81
UBXN4-207ENST00000471246 TPSG1Q9NRR2 321 aa3.75□□□□□ -1.81
UBXN4-207ENST00000471246 PCDHGC3Q9UN70 934 aa3.75□□□□□ -1.81
UBXN4-207ENST00000471246 RELBQ01201 579 aa3.74□□□□□ -1.81
UBXN4-207ENST00000471246 MAP2K5Q13163 448 aa3.74□□□□□ -1.81
UBXN4-207ENST00000471246 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
UBXN4-207ENST00000471246 FOXD4L5Q5VV16 416 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-207ENST00000471246 FOXR1Q6PIV2 292 aa3.74□□□□□ -1.81
UBXN4-207ENST00000471246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBXN4-207ENST00000471246 EDARADDQ8WWZ3 215 aa3.74□□□□□ -1.81
UBXN4-207ENST00000471246 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
UBXN4-207ENST00000471246 C6orf229H3BNL8 230 aa3.73□□□□□ -1.81
UBXN4-207ENST00000471246 GNB5O14775 395 aa3.73□□□□□ -1.81
UBXN4-207ENST00000471246 PPP1R26Q5T8A7 1209 aaPredicted RBP3.73□□□□□ -1.81
UBXN4-207ENST00000471246 C1QTNF2Q9BXJ5 285 aa3.73□□□□□ -1.81
UBXN4-207ENST00000471246 ZNF395Q9H8N7 513 aaPredicted RBP3.73□□□□□ -1.81
UBXN4-207ENST00000471246 MAP4K5Q9Y4K4 846 aa3.73□□□□□ -1.81
UBXN4-207ENST00000471246 CTHP32929 405 aa3.72□□□□□ -1.81
UBXN4-207ENST00000471246 AGERQ15109 404 aa3.72□□□□□ -1.81
UBXN4-207ENST00000471246 VASH1Q7L8A9 365 aaPredicted RBP3.72□□□□□ -1.81
UBXN4-207ENST00000471246 RIC3Q7Z5B4 369 aa3.72□□□□□ -1.81
UBXN4-207ENST00000471246 CCDC102AQ96A19 550 aa3.72□□□□□ -1.81
UBXN4-207ENST00000471246 KLRG1Q96E93 195 aa3.72□□□□□ -1.81
UBXN4-207ENST00000471246 NSFL1CQ9UNZ2 370 aaKnown RBP3.72□□□□□ -1.81
UBXN4-207ENST00000471246 RHOQP17081 205 aa3.71□□□□□ -1.82
UBXN4-207ENST00000471246 MAP2K3P46734 347 aa3.71□□□□□ -1.82
UBXN4-207ENST00000471246 PRPF38BQ5VTL8 546 aaKnown RBP3.71□□□□□ -1.82
UBXN4-207ENST00000471246 GIGYF2Q6Y7W6 1299 aaKnown RBP3.71□□□□□ -1.82
UBXN4-207ENST00000471246 BPHLQ86WA6 291 aaPredicted RBP3.71□□□□□ -1.82
UBXN4-207ENST00000471246 TRERF1Q96PN7 1200 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms