RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SPATA31A5Q5VU36 1347 aa20.53■□□□□ 0.88
CDC42SE1-203ENST00000470278 SPATA31A7Q8IWB4 1347 aa20.53■□□□□ 0.88
CDC42SE1-203ENST00000470278 ABCC6O95255 1503 aa20.53■□□□□ 0.88
CDC42SE1-203ENST00000470278 FAM98CQ17RN3 349 aaKnown RBP20.53■□□□□ 0.88
CDC42SE1-203ENST00000470278 GCP02774 474 aa20.52■□□□□ 0.88
CDC42SE1-203ENST00000470278 KCNH5Q8NCM2 988 aa20.52■□□□□ 0.88
CDC42SE1-203ENST00000470278 KIAA0232Q92628 1395 aa20.51■□□□□ 0.87
CDC42SE1-203ENST00000470278 PER1O15534 1290 aaPredicted RBP20.51■□□□□ 0.87
CDC42SE1-203ENST00000470278 CCDC9Q9Y3X0 531 aaKnown RBP20.51■□□□□ 0.87
CDC42SE1-203ENST00000470278 NPC1L1Q9UHC9 1359 aa20.5■□□□□ 0.87
CDC42SE1-203ENST00000470278 FAM182BQ5T319 152 aa20.5■□□□□ 0.87
CDC42SE1-203ENST00000470278 COG3Q96JB2 828 aa20.5■□□□□ 0.87
CDC42SE1-203ENST00000470278 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
CDC42SE1-203ENST00000470278 CAMTA1Q9Y6Y1 1673 aa20.5■□□□□ 0.87
CDC42SE1-203ENST00000470278 LTN1O94822 1766 aa20.49■□□□□ 0.87
CDC42SE1-203ENST00000470278 DISP2A7MBM2 1401 aa20.49■□□□□ 0.87
CDC42SE1-203ENST00000470278 RREB1Q92766 1687 aa20.48■□□□□ 0.87
CDC42SE1-203ENST00000470278 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
CDC42SE1-203ENST00000470278 GGNBP2Q9H3C7 697 aa20.48■□□□□ 0.87
CDC42SE1-203ENST00000470278 COL18A1P39060 1754 aa20.47■□□□□ 0.87
CDC42SE1-203ENST00000470278 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
CDC42SE1-203ENST00000470278 SPATA31A1Q5TZJ5 1347 aa20.46■□□□□ 0.87
CDC42SE1-203ENST00000470278 NUP188Q5SRE5 1749 aa20.45■□□□□ 0.86
CDC42SE1-203ENST00000470278 CHRNA2Q15822 529 aa20.45■□□□□ 0.86
CDC42SE1-203ENST00000470278 PRDM11Q9NQV5 511 aa20.45■□□□□ 0.86
CDC42SE1-203ENST00000470278 AATKQ6ZMQ8 1374 aa20.45■□□□□ 0.86
CDC42SE1-203ENST00000470278 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
CDC42SE1-203ENST00000470278 WNK3Q9BYP7 1800 aa20.43■□□□□ 0.86
CDC42SE1-203ENST00000470278 ZC3H6P61129 1189 aaKnown RBP20.43■□□□□ 0.86
CDC42SE1-203ENST00000470278 ARHGEF25Q86VW2 580 aa20.43■□□□□ 0.86
CDC42SE1-203ENST00000470278 PEAK1Q9H792 1746 aa20.43■□□□□ 0.86
CDC42SE1-203ENST00000470278 PSDA5PKW4 1024 aaPredicted RBP20.41■□□□□ 0.86
CDC42SE1-203ENST00000470278 RTL1A6NKG5 1358 aa20.41■□□□□ 0.86
CDC42SE1-203ENST00000470278 KIF24Q5T7B8 1368 aa20.41■□□□□ 0.86
CDC42SE1-203ENST00000470278 A0A0G2JS52 829 aa20.4■□□□□ 0.86
CDC42SE1-203ENST00000470278 SOX12O15370 315 aa20.4■□□□□ 0.86
CDC42SE1-203ENST00000470278 MYT1Q01538 1121 aa20.4■□□□□ 0.86
CDC42SE1-203ENST00000470278 EN1Q05925 392 aaPredicted RBP20.4■□□□□ 0.86
CDC42SE1-203ENST00000470278 SMG6Q86US8 1419 aaKnown RBP20.4■□□□□ 0.86
CDC42SE1-203ENST00000470278 SBF2Q86WG5 1849 aa20.4■□□□□ 0.86
CDC42SE1-203ENST00000470278 COL5A2P05997 1499 aaPredicted RBP20.39■□□□□ 0.85
CDC42SE1-203ENST00000470278 SF3B2Q13435 895 aaKnown RBP20.39■□□□□ 0.85
CDC42SE1-203ENST00000470278 MAP3K19Q56UN5 1328 aa20.38■□□□□ 0.85
CDC42SE1-203ENST00000470278 BAG6P46379 1132 aa20.38■□□□□ 0.85
CDC42SE1-203ENST00000470278 RGPD5Q99666 1765 aa20.38■□□□□ 0.85
CDC42SE1-203ENST00000470278 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
CDC42SE1-203ENST00000470278 MAP2P11137 1827 aaKnown RBP20.37■□□□□ 0.85
CDC42SE1-203ENST00000470278 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
CDC42SE1-203ENST00000470278 FAM208AQ9UK61 1670 aaKnown RBP20.36■□□□□ 0.85
CDC42SE1-203ENST00000470278 MORC1Q86VD1 984 aa20.35■□□□□ 0.85
CDC42SE1-203ENST00000470278 STRN4Q9NRL3 753 aa20.35■□□□□ 0.85
CDC42SE1-203ENST00000470278 FLT4P35916 1363 aa20.34■□□□□ 0.85
CDC42SE1-203ENST00000470278 LARP1Q6PKG0 1096 aaKnown RBP20.34■□□□□ 0.85
CDC42SE1-203ENST00000470278 CAMKK2Q96RR4 588 aa20.34■□□□□ 0.85
CDC42SE1-203ENST00000470278 RRS1Q15050 365 aaKnown RBP20.33■□□□□ 0.85
CDC42SE1-203ENST00000470278 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.85
CDC42SE1-203ENST00000470278 CC2D1BQ5T0F9 858 aaKnown RBP20.33■□□□□ 0.85
CDC42SE1-203ENST00000470278 RGPD3A6NKT7 1758 aaPredicted RBP20.32■□□□□ 0.84
CDC42SE1-203ENST00000470278 RGPD4Q7Z3J3 1758 aa20.32■□□□□ 0.84
CDC42SE1-203ENST00000470278 FBLN1P23142 703 aa20.32■□□□□ 0.84
CDC42SE1-203ENST00000470278 BARGINQ6ZT62 677 aa20.32■□□□□ 0.84
CDC42SE1-203ENST00000470278 IP6K1Q92551 441 aa20.32■□□□□ 0.84
CDC42SE1-203ENST00000470278 AXIN2Q9Y2T1 843 aa20.32■□□□□ 0.84
CDC42SE1-203ENST00000470278 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
CDC42SE1-203ENST00000470278 ZBTB7CA1YPR0 619 aa20.31■□□□□ 0.84
CDC42SE1-203ENST00000470278 HOXC9P31274 260 aa20.31■□□□□ 0.84
CDC42SE1-203ENST00000470278 POLKQ9UBT6 870 aa20.31■□□□□ 0.84
CDC42SE1-203ENST00000470278 INSRP06213 1382 aa20.31■□□□□ 0.84
CDC42SE1-203ENST00000470278 ERBB3P21860 1342 aa20.3■□□□□ 0.84
CDC42SE1-203ENST00000470278 TRIM37O94972 964 aa20.3■□□□□ 0.84
CDC42SE1-203ENST00000470278 AMPHP49418 695 aa20.3■□□□□ 0.84
CDC42SE1-203ENST00000470278 WDR17Q8IZU2 1322 aa20.29■□□□□ 0.84
CDC42SE1-203ENST00000470278 CRB1P82279 1406 aa20.29■□□□□ 0.84
CDC42SE1-203ENST00000470278 R3HDM1Q15032 1099 aaKnown RBP20.29■□□□□ 0.84
CDC42SE1-203ENST00000470278 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
CDC42SE1-203ENST00000470278 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
CDC42SE1-203ENST00000470278 TNNT2P45379 298 aaPredicted RBP20.28■□□□□ 0.84
CDC42SE1-203ENST00000470278 FAM196AQ6ZSG2 479 aa20.27■□□□□ 0.84
CDC42SE1-203ENST00000470278 EVA1CP58658 441 aa20.25■□□□□ 0.83
CDC42SE1-203ENST00000470278 TCP11L2Q8N4U5 519 aa20.25■□□□□ 0.83
CDC42SE1-203ENST00000470278 CASZ1Q86V15 1759 aa20.24■□□□□ 0.83
CDC42SE1-203ENST00000470278 ANKRD24Q8TF21 1146 aa20.24■□□□□ 0.83
CDC42SE1-203ENST00000470278 HSP90AB2PQ58FF8 381 aa20.23■□□□□ 0.83
CDC42SE1-203ENST00000470278 RALBP1Q15311 655 aa20.22■□□□□ 0.83
CDC42SE1-203ENST00000470278 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
CDC42SE1-203ENST00000470278 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
CDC42SE1-203ENST00000470278 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
CDC42SE1-203ENST00000470278 CARD10Q9BWT7 1032 aa20.21■□□□□ 0.83
CDC42SE1-203ENST00000470278 THRAP3Q9Y2W1 955 aaKnown RBP20.21■□□□□ 0.83
CDC42SE1-203ENST00000470278 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
CDC42SE1-203ENST00000470278 APBA3O96018 575 aa20.2■□□□□ 0.82
CDC42SE1-203ENST00000470278 CSB-PGBD3P0DP91 1061 aa20.2■□□□□ 0.82
CDC42SE1-203ENST00000470278 MTHFSP49914 203 aa20.2■□□□□ 0.82
CDC42SE1-203ENST00000470278 TOM1L2Q6ZVM7 507 aa20.2■□□□□ 0.82
CDC42SE1-203ENST00000470278 PTF1AQ7RTS3 328 aa20.2■□□□□ 0.82
CDC42SE1-203ENST00000470278 PPP2R1AP30153 589 aa20.19■□□□□ 0.82
CDC42SE1-203ENST00000470278 CNGB1Q14028 1251 aaPredicted RBP20.19■□□□□ 0.82
CDC42SE1-203ENST00000470278 OVOS2A0A0G2JMS6 1433 aa20.18■□□□□ 0.82
CDC42SE1-203ENST00000470278 PDE3BQ13370 1112 aa20.17■□□□□ 0.82
CDC42SE1-203ENST00000470278 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms