RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 CNNM1Q9NRU3 951 aa18.21■□□□□ 0.51
LIMS2-213ENST00000469300 SHANK2Q9UPX8 1470 aa18.2■□□□□ 0.5
LIMS2-213ENST00000469300 PKNOX2Q96KN3 472 aa18.2■□□□□ 0.5
LIMS2-213ENST00000469300 NUCB2P80303 420 aa18.2■□□□□ 0.5
LIMS2-213ENST00000469300 GSE1Q14687 1217 aa18.2■□□□□ 0.5
LIMS2-213ENST00000469300 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
LIMS2-213ENST00000469300 SAFBQ15424 915 aaKnown RBP eCLIP18.2■□□□□ 0.5
LIMS2-213ENST00000469300 CHMP5Q9NZZ3 219 aa18.2■□□□□ 0.5
LIMS2-213ENST00000469300 TRAPPC8Q9Y2L5 1435 aa18.2■□□□□ 0.5
LIMS2-213ENST00000469300 PUS7Q96PZ0 661 aaKnown RBP18.2■□□□□ 0.5
LIMS2-213ENST00000469300 MVPQ14764 893 aaKnown RBP18.19■□□□□ 0.5
LIMS2-213ENST00000469300 DHX16O60231 1041 aaKnown RBP18.19■□□□□ 0.5
LIMS2-213ENST00000469300 KRT28Q7Z3Y7 464 aa18.19■□□□□ 0.5
LIMS2-213ENST00000469300 SMC3Q9UQE7 1217 aa18.19■□□□□ 0.5
LIMS2-213ENST00000469300 SLFN5Q08AF3 891 aa18.19■□□□□ 0.5
LIMS2-213ENST00000469300 CCDC27Q2M243 656 aa18.19■□□□□ 0.5
LIMS2-213ENST00000469300 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-213ENST00000469300 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
LIMS2-213ENST00000469300 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
LIMS2-213ENST00000469300 CCDC47Q96A33 483 aaKnown RBP18.19■□□□□ 0.5
LIMS2-213ENST00000469300 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
LIMS2-213ENST00000469300 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-213ENST00000469300 TTC21AQ8NDW8 1320 aa18.18■□□□□ 0.5
LIMS2-213ENST00000469300 CCDC57Q2TAC2 916 aa18.18■□□□□ 0.5
LIMS2-213ENST00000469300 FAM177BA6PVY3 158 aa18.17■□□□□ 0.5
LIMS2-213ENST00000469300 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
LIMS2-213ENST00000469300 BCAR3O75815 825 aa18.17■□□□□ 0.5
LIMS2-213ENST00000469300 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.17■□□□□ 0.5
LIMS2-213ENST00000469300 MCM2P49736 904 aa18.17■□□□□ 0.5
LIMS2-213ENST00000469300 LRRCC1Q9C099 1032 aa18.17■□□□□ 0.5
LIMS2-213ENST00000469300 SLC3A2P08195 630 aaKnown RBP18.16■□□□□ 0.5
LIMS2-213ENST00000469300 FOXD4L5Q5VV16 416 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-213ENST00000469300 FOXD4L4Q8WXT5 416 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-213ENST00000469300 TCEAL9Q9UHQ7 104 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 MSH6P52701 1360 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 ALDH1L2Q3SY69 923 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 HOOK1Q9UJC3 728 aaKnown RBP18.16■□□□□ 0.5
LIMS2-213ENST00000469300 PDZRN3Q9UPQ7 1066 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 RAD21O60216 631 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 KLHL34Q8N239 644 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 MPHOSPH8Q99549 860 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 TMOD3Q9NYL9 352 aa18.16■□□□□ 0.5
LIMS2-213ENST00000469300 RIMS2Q9UQ26 1411 aa18.15■□□□□ 0.5
LIMS2-213ENST00000469300 MYL6BP14649 208 aa18.15■□□□□ 0.5
LIMS2-213ENST00000469300 XBP1P17861 261 aa18.15■□□□□ 0.5
LIMS2-213ENST00000469300 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
LIMS2-213ENST00000469300 TPD52L1Q16890 204 aaPredicted RBP18.14■□□□□ 0.49
LIMS2-213ENST00000469300 DUSP27Q5VZP5 1158 aa18.14■□□□□ 0.49
LIMS2-213ENST00000469300 CEP126Q9P2H0 1117 aa18.14■□□□□ 0.49
LIMS2-213ENST00000469300 ACEP12821 1306 aa18.14■□□□□ 0.49
LIMS2-213ENST00000469300 PTPRKQ15262 1439 aa18.13■□□□□ 0.49
LIMS2-213ENST00000469300 TTC39AQ5SRH9 613 aa18.13■□□□□ 0.49
LIMS2-213ENST00000469300 ZSCAN25Q6NSZ9 544 aa18.13■□□□□ 0.49
LIMS2-213ENST00000469300 LARP1Q6PKG0 1096 aaKnown RBP18.13■□□□□ 0.49
LIMS2-213ENST00000469300 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
LIMS2-213ENST00000469300 GOLGA6L19H0YKK7 550 aa18.13■□□□□ 0.49
LIMS2-213ENST00000469300 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.13■□□□□ 0.49
LIMS2-213ENST00000469300 BECN2A8MW95 431 aa18.12■□□□□ 0.49
LIMS2-213ENST00000469300 TPM2P07951 284 aa18.12■□□□□ 0.49
LIMS2-213ENST00000469300 DNAJC2Q99543 621 aaKnown RBP18.12■□□□□ 0.49
LIMS2-213ENST00000469300 NPHP3Q7Z494 1330 aa18.12■□□□□ 0.49
LIMS2-213ENST00000469300 BRMS1Q9HCU9 246 aa18.12■□□□□ 0.49
LIMS2-213ENST00000469300 RALGAPBQ86X10 1494 aa18.11■□□□□ 0.49
LIMS2-213ENST00000469300 SRGAP3O43295 1099 aa18.1■□□□□ 0.49
LIMS2-213ENST00000469300 HSP90AB3PQ58FF7 597 aa18.1■□□□□ 0.49
LIMS2-213ENST00000469300 NACAP1Q9BZK3 213 aa18.1■□□□□ 0.49
LIMS2-213ENST00000469300 DISP1Q96F81 1524 aa18.1■□□□□ 0.49
LIMS2-213ENST00000469300 TSR1Q2NL82 804 aaKnown RBP18.1■□□□□ 0.49
LIMS2-213ENST00000469300 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
LIMS2-213ENST00000469300 VPS37CA5D8V6 355 aaPredicted RBP18.1■□□□□ 0.49
LIMS2-213ENST00000469300 EXOC5O00471 708 aa18.1■□□□□ 0.49
LIMS2-213ENST00000469300 PDCP20941 246 aa18.09■□□□□ 0.49
LIMS2-213ENST00000469300 C1orf115Q9H7X2 142 aa18.09■□□□□ 0.49
LIMS2-213ENST00000469300 TPM1P09493 284 aa18.09■□□□□ 0.49
LIMS2-213ENST00000469300 RABEP1Q15276 862 aa18.09■□□□□ 0.49
LIMS2-213ENST00000469300 MCM10Q7L590 875 aa18.09■□□□□ 0.49
LIMS2-213ENST00000469300 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
LIMS2-213ENST00000469300 TPM3P06753 285 aa18.08■□□□□ 0.49
LIMS2-213ENST00000469300 TOM1O60784 492 aa18.08■□□□□ 0.48
LIMS2-213ENST00000469300 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.48
LIMS2-213ENST00000469300 CREBRFQ8IUR6 639 aa18.08■□□□□ 0.48
LIMS2-213ENST00000469300 ANKRD20A12PQ8NF67 263 aa18.08■□□□□ 0.48
LIMS2-213ENST00000469300 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
LIMS2-213ENST00000469300 BICD2Q8TD16 824 aa18.07■□□□□ 0.48
LIMS2-213ENST00000469300 FYB1O15117 783 aa18.07■□□□□ 0.48
LIMS2-213ENST00000469300 FMNL2Q96PY5 1086 aa18.07■□□□□ 0.48
LIMS2-213ENST00000469300 PRAG1Q86YV5 1406 aa18.07■□□□□ 0.48
LIMS2-213ENST00000469300 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
LIMS2-213ENST00000469300 IGHMBP2P38935 993 aaKnown RBP18.06■□□□□ 0.48
LIMS2-213ENST00000469300 DBF4Q9UBU7 674 aaPredicted RBP18.06■□□□□ 0.48
LIMS2-213ENST00000469300 HYPKQ9NX55 129 aa18.06■□□□□ 0.48
LIMS2-213ENST00000469300 IL16Q14005 1332 aa18.06■□□□□ 0.48
LIMS2-213ENST00000469300 ZMYM3Q14202 1370 aa18.06■□□□□ 0.48
LIMS2-213ENST00000469300 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
LIMS2-213ENST00000469300 DISP3Q9P2K9 1392 aa18.06■□□□□ 0.48
LIMS2-213ENST00000469300 CCDC73Q6ZRK6 1079 aa18.06■□□□□ 0.48
LIMS2-213ENST00000469300 CEP89Q96ST8 783 aa18.06■□□□□ 0.48
LIMS2-213ENST00000469300 CFAP43Q8NDM7 1665 aa18.05■□□□□ 0.48
LIMS2-213ENST00000469300 ADAMTS2O95450 1211 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms