RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 PIP4K2BP78356 416 aa8.08□□□□□ -1.12
USP39-213ENST00000467885 NUTM2GQ5VZR2 741 aa8.08□□□□□ -1.12
USP39-213ENST00000467885 NLRP13Q86W25 1043 aa8.08□□□□□ -1.12
USP39-213ENST00000467885 COG3Q96JB2 828 aa8.08□□□□□ -1.12
USP39-213ENST00000467885 POLKQ9UBT6 870 aa8.08□□□□□ -1.12
USP39-213ENST00000467885 PARD3Q8TEW0 1356 aa8.08□□□□□ -1.12
USP39-213ENST00000467885 XIRP1Q702N8 1843 aaKnown RBP8.08□□□□□ -1.12
USP39-213ENST00000467885 NALCNQ8IZF0 1738 aa8.07□□□□□ -1.12
USP39-213ENST00000467885 POTEFA5A3E0 1075 aa8.07□□□□□ -1.12
USP39-213ENST00000467885 MAP3K13O43283 966 aa8.07□□□□□ -1.12
USP39-213ENST00000467885 GCP02774 474 aa8.07□□□□□ -1.12
USP39-213ENST00000467885 TNNT2P45379 298 aaPredicted RBP8.07□□□□□ -1.12
USP39-213ENST00000467885 RASEFQ8IZ41 740 aa8.07□□□□□ -1.12
USP39-213ENST00000467885 LRRC59Q96AG4 307 aaKnown RBP8.07□□□□□ -1.12
USP39-213ENST00000467885 RTN4Q9NQC3 1192 aaKnown RBP8.07□□□□□ -1.12
USP39-213ENST00000467885 FMN2Q9NZ56 1722 aa8.06□□□□□ -1.12
USP39-213ENST00000467885 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
USP39-213ENST00000467885 CABLES1Q8TDN4 633 aa8.06□□□□□ -1.12
USP39-213ENST00000467885 PNISRQ8TF01 805 aaKnown RBP8.06□□□□□ -1.12
USP39-213ENST00000467885 SBNO1A3KN83 1393 aa8.06□□□□□ -1.12
USP39-213ENST00000467885 MYBBP1AQ9BQG0 1328 aaKnown RBP8.05□□□□□ -1.12
USP39-213ENST00000467885 LMOD2Q6P5Q4 547 aa8.05□□□□□ -1.12
USP39-213ENST00000467885 SCUBE2Q9NQ36 999 aa8.05□□□□□ -1.12
USP39-213ENST00000467885 NSD2O96028 1365 aa8.05□□□□□ -1.12
USP39-213ENST00000467885 PLEKHG5O94827 1062 aa8.04□□□□□ -1.12
USP39-213ENST00000467885 TIE1P35590 1138 aa8.04□□□□□ -1.12
USP39-213ENST00000467885 ARHGEF25Q86VW2 580 aa8.04□□□□□ -1.12
USP39-213ENST00000467885 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
USP39-213ENST00000467885 MYOM1P52179 1685 aa8.04□□□□□ -1.12
USP39-213ENST00000467885 RGPD8O14715 1765 aaPredicted RBP8.04□□□□□ -1.12
USP39-213ENST00000467885 PXDNQ92626 1479 aa8.03□□□□□ -1.12
USP39-213ENST00000467885 AATKQ6ZMQ8 1374 aa8.03□□□□□ -1.12
USP39-213ENST00000467885 RRS1Q15050 365 aaKnown RBP8.03□□□□□ -1.12
USP39-213ENST00000467885 KCNH5Q8NCM2 988 aa8.03□□□□□ -1.12
USP39-213ENST00000467885 PCDH10Q9P2E7 1040 aa8.03□□□□□ -1.12
USP39-213ENST00000467885 EMILIN1Q9Y6C2 1016 aa8.03□□□□□ -1.12
USP39-213ENST00000467885 USP19O94966 1318 aa8.03□□□□□ -1.12
USP39-213ENST00000467885 INSRP06213 1382 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 PNPLA6Q8IY17 1366 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 ZC3H6P61129 1189 aaKnown RBP8.02□□□□□ -1.13
USP39-213ENST00000467885 HSP90AB2PQ58FF8 381 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 IP6K1Q92551 441 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
USP39-213ENST00000467885 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 ADAMTS8Q9UP79 889 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 AXIN2Q9Y2T1 843 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 MAP3K19Q56UN5 1328 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 TOPAZ1Q8N9V7 1692 aa8.02□□□□□ -1.13
USP39-213ENST00000467885 FAM83GA6ND36 823 aa8.01□□□□□ -1.13
USP39-213ENST00000467885 TTLL13PA6NNM8 815 aa8.01□□□□□ -1.13
USP39-213ENST00000467885 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
USP39-213ENST00000467885 SOX12O15370 315 aa8.01□□□□□ -1.13
USP39-213ENST00000467885 HSPA1LP34931 641 aa8.01□□□□□ -1.13
USP39-213ENST00000467885 IL13P35225 146 aa8.01□□□□□ -1.13
USP39-213ENST00000467885 OVOS2A0A0J9YW53 1432 aa8.01□□□□□ -1.13
USP39-213ENST00000467885 OVOS2Q6IE36 1432 aa8.01□□□□□ -1.13
USP39-213ENST00000467885 ARHGEF10O15013 1369 aa7.99□□□□□ -1.13
USP39-213ENST00000467885 DIAPH1O60610 1272 aaKnown RBP7.99□□□□□ -1.13
USP39-213ENST00000467885 HOXC9P31274 260 aa7.99□□□□□ -1.13
USP39-213ENST00000467885 AMPHP49418 695 aa7.99□□□□□ -1.13
USP39-213ENST00000467885 COLQQ9Y215 455 aaPredicted RBP7.99□□□□□ -1.13
USP39-213ENST00000467885 TNS3Q68CZ2 1445 aa7.98□□□□□ -1.13
USP39-213ENST00000467885 EIF4A2Q14240 407 aaKnown RBP7.98□□□□□ -1.13
USP39-213ENST00000467885 CHRNA2Q15822 529 aa7.98□□□□□ -1.13
USP39-213ENST00000467885 FAM9BQ8IZU0 186 aa7.98□□□□□ -1.13
USP39-213ENST00000467885 AKAP12Q02952 1782 aa7.97□□□□□ -1.13
USP39-213ENST00000467885 FBXO41Q8TF61 875 aa7.97□□□□□ -1.13
USP39-213ENST00000467885 CFAP53Q96M91 514 aa7.97□□□□□ -1.13
USP39-213ENST00000467885 EYA1Q99502 592 aa7.97□□□□□ -1.13
USP39-213ENST00000467885 MON2Q7Z3U7 1717 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 FCHSD2O94868 740 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 NBPF6Q5VWK0 638 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 PLCD3Q8N3E9 789 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 NBPF4Q96M43 638 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 PLEKHF1Q96S99 279 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 NUDCQ9Y266 331 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 CPDO75976 1380 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 KIF24Q5T7B8 1368 aa7.96□□□□□ -1.14
USP39-213ENST00000467885 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
USP39-213ENST00000467885 ITSN1Q15811 1721 aa7.95□□□□□ -1.14
USP39-213ENST00000467885 NUTM2BA6NNL0 878 aaPredicted RBP7.95□□□□□ -1.14
USP39-213ENST00000467885 NUTM2EB1AL46 878 aaPredicted RBP7.95□□□□□ -1.14
USP39-213ENST00000467885 SEC24BO95487 1268 aa7.95□□□□□ -1.14
USP39-213ENST00000467885 U2AF1L5P0DN76 240 aaPredicted RBP7.95□□□□□ -1.14
USP39-213ENST00000467885 U2AF1Q01081 240 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP39-213ENST00000467885 NUTM2AQ8IVF1 878 aaPredicted RBP7.95□□□□□ -1.14
USP39-213ENST00000467885 SGIP1Q9BQI5 828 aa7.95□□□□□ -1.14
USP39-213ENST00000467885 TRIM35Q9UPQ4 493 aa7.95□□□□□ -1.14
USP39-213ENST00000467885 MED1Q15648 1581 aaPredicted RBP7.95□□□□□ -1.14
USP39-213ENST00000467885 AHDC1Q5TGY3 1603 aaPredicted RBP7.95□□□□□ -1.14
USP39-213ENST00000467885 ROBO1Q9Y6N7 1651 aa7.95□□□□□ -1.14
USP39-213ENST00000467885 KIAA0232Q92628 1395 aa7.95□□□□□ -1.14
USP39-213ENST00000467885 TRPM3Q9HCF6 1732 aaPredicted RBP7.95□□□□□ -1.14
USP39-213ENST00000467885 NRKQ7Z2Y5 1582 aa7.94□□□□□ -1.14
USP39-213ENST00000467885 ZBTB7CA1YPR0 619 aa7.94□□□□□ -1.14
USP39-213ENST00000467885 U2SURPO15042 1029 aaKnown RBP7.94□□□□□ -1.14
USP39-213ENST00000467885 ADAMTS2O95450 1211 aa7.94□□□□□ -1.14
USP39-213ENST00000467885 NUBP1P53384 320 aa7.94□□□□□ -1.14
USP39-213ENST00000467885 HAP1P54257 671 aaPredicted RBP7.94□□□□□ -1.14
USP39-213ENST00000467885 ANKRD24Q8TF21 1146 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms