RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 TNNQ9UQP3 1299 aa17.55■□□□□ 0.4
UBE4B-206ENST00000466379 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
UBE4B-206ENST00000466379 MAP3K19Q56UN5 1328 aa17.53■□□□□ 0.4
UBE4B-206ENST00000466379 PAK3O75914 559 aaPredicted RBP17.52■□□□□ 0.4
UBE4B-206ENST00000466379 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
UBE4B-206ENST00000466379 IL16Q14005 1332 aa17.52■□□□□ 0.4
UBE4B-206ENST00000466379 NLRP6P59044 892 aa17.52■□□□□ 0.4
UBE4B-206ENST00000466379 SULT6B1Q6IMI4 303 aa17.51■□□□□ 0.39
UBE4B-206ENST00000466379 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
UBE4B-206ENST00000466379 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
UBE4B-206ENST00000466379 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
UBE4B-206ENST00000466379 PHF8Q9UPP1 1060 aa17.51■□□□□ 0.39
UBE4B-206ENST00000466379 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
UBE4B-206ENST00000466379 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
UBE4B-206ENST00000466379 MARF1Q9Y4F3 1742 aaKnown RBP17.49■□□□□ 0.39
UBE4B-206ENST00000466379 KDM2BQ8NHM5 1336 aa17.49■□□□□ 0.39
UBE4B-206ENST00000466379 FAM83GA6ND36 823 aa17.49■□□□□ 0.39
UBE4B-206ENST00000466379 RLBP1P12271 317 aa17.49■□□□□ 0.39
UBE4B-206ENST00000466379 MYT1Q01538 1121 aa17.49■□□□□ 0.39
UBE4B-206ENST00000466379 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
UBE4B-206ENST00000466379 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
UBE4B-206ENST00000466379 CLUAP1Q96AJ1 413 aa17.49■□□□□ 0.39
UBE4B-206ENST00000466379 SMC4Q9NTJ3 1288 aa17.47■□□□□ 0.39
UBE4B-206ENST00000466379 RGPD1P0DJD0 1748 aa17.47■□□□□ 0.39
UBE4B-206ENST00000466379 SBNO1A3KN83 1393 aa17.47■□□□□ 0.39
UBE4B-206ENST00000466379 AMPHP49418 695 aa17.47■□□□□ 0.39
UBE4B-206ENST00000466379 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
UBE4B-206ENST00000466379 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
UBE4B-206ENST00000466379 FLT4P35916 1363 aa17.46■□□□□ 0.39
UBE4B-206ENST00000466379 CT47B1P0C2W7 299 aaPredicted RBP17.46■□□□□ 0.39
UBE4B-206ENST00000466379 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
UBE4B-206ENST00000466379 CENPQQ7L2Z9 268 aaPredicted RBP17.45■□□□□ 0.38
UBE4B-206ENST00000466379 PROSER2Q86WR7 435 aaPredicted RBP17.44■□□□□ 0.38
UBE4B-206ENST00000466379 ORAI2Q96SN7 254 aa17.44■□□□□ 0.38
UBE4B-206ENST00000466379 ZKSCAN2Q63HK3 967 aa17.43■□□□□ 0.38
UBE4B-206ENST00000466379 XPCQ01831 940 aaPredicted RBP17.42■□□□□ 0.38
UBE4B-206ENST00000466379 PSME1Q06323 249 aa17.42■□□□□ 0.38
UBE4B-206ENST00000466379 MBIPQ9NS73 344 aa17.42■□□□□ 0.38
UBE4B-206ENST00000466379 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
UBE4B-206ENST00000466379 TCERG1O14776 1098 aaKnown RBP17.42■□□□□ 0.38
UBE4B-206ENST00000466379 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
UBE4B-206ENST00000466379 IFT57Q9NWB7 429 aa17.42■□□□□ 0.38
UBE4B-206ENST00000466379 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
UBE4B-206ENST00000466379 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
UBE4B-206ENST00000466379 HOXC9P31274 260 aa17.41■□□□□ 0.38
UBE4B-206ENST00000466379 GNAI1P63096 354 aa17.41■□□□□ 0.38
UBE4B-206ENST00000466379 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
UBE4B-206ENST00000466379 EYA1Q99502 592 aa17.41■□□□□ 0.38
UBE4B-206ENST00000466379 IGHDP01880 384 aa17.41■□□□□ 0.38
UBE4B-206ENST00000466379 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
UBE4B-206ENST00000466379 TSPYL6Q8N831 410 aa17.41■□□□□ 0.38
UBE4B-206ENST00000466379 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
UBE4B-206ENST00000466379 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
UBE4B-206ENST00000466379 LTV1Q96GA3 475 aaPredicted RBP17.4■□□□□ 0.38
UBE4B-206ENST00000466379 FOXO3O43524 673 aa17.4■□□□□ 0.38
UBE4B-206ENST00000466379 HSPA2P54652 639 aa17.4■□□□□ 0.38
UBE4B-206ENST00000466379 MCM10Q7L590 875 aa17.4■□□□□ 0.38
UBE4B-206ENST00000466379 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
UBE4B-206ENST00000466379 TRIM27P14373 513 aa17.39■□□□□ 0.37
UBE4B-206ENST00000466379 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.37
UBE4B-206ENST00000466379 CFAP44Q96MT7 982 aa17.38■□□□□ 0.37
UBE4B-206ENST00000466379 IGSF1Q8N6C5 1336 aa17.38■□□□□ 0.37
UBE4B-206ENST00000466379 LTN1O94822 1766 aa17.37■□□□□ 0.37
UBE4B-206ENST00000466379 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
UBE4B-206ENST00000466379 VAMP4O75379 141 aa17.37■□□□□ 0.37
UBE4B-206ENST00000466379 MVPQ14764 893 aaKnown RBP17.37■□□□□ 0.37
UBE4B-206ENST00000466379 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
UBE4B-206ENST00000466379 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
UBE4B-206ENST00000466379 STRCP1A6NGW2 1772 aa17.36■□□□□ 0.37
UBE4B-206ENST00000466379 C8orf58Q8NAV2 365 aa17.36■□□□□ 0.37
UBE4B-206ENST00000466379 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
UBE4B-206ENST00000466379 KDRP35968 1356 aa17.35■□□□□ 0.37
UBE4B-206ENST00000466379 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
UBE4B-206ENST00000466379 NFAT5O94916 1531 aa17.35■□□□□ 0.37
UBE4B-206ENST00000466379 PDE4AP27815 886 aa17.35■□□□□ 0.37
UBE4B-206ENST00000466379 TWISTNBQ3B726 338 aaPredicted RBP17.34■□□□□ 0.37
UBE4B-206ENST00000466379 LMOD2Q6P5Q4 547 aa17.34■□□□□ 0.37
UBE4B-206ENST00000466379 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
UBE4B-206ENST00000466379 USHBP1Q8N6Y0 703 aa17.34■□□□□ 0.37
UBE4B-206ENST00000466379 KIF16BQ96L93 1317 aa17.34■□□□□ 0.37
UBE4B-206ENST00000466379 MS4A1P11836 297 aa17.33■□□□□ 0.37
UBE4B-206ENST00000466379 RGS3P49796 1198 aa17.33■□□□□ 0.37
UBE4B-206ENST00000466379 TMEM57Q8N5G2 664 aa17.33■□□□□ 0.37
UBE4B-206ENST00000466379 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.37
UBE4B-206ENST00000466379 KIF24Q5T7B8 1368 aa17.33■□□□□ 0.37
UBE4B-206ENST00000466379 KRT24Q2M2I5 525 aa17.33■□□□□ 0.36
UBE4B-206ENST00000466379 C19orf44Q9H6X5 657 aa17.33■□□□□ 0.36
UBE4B-206ENST00000466379 TMEM94Q12767 1356 aa17.33■□□□□ 0.36
UBE4B-206ENST00000466379 KCNA4P22459 653 aa17.32■□□□□ 0.36
UBE4B-206ENST00000466379 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
UBE4B-206ENST00000466379 MSH5O43196 834 aa17.32■□□□□ 0.36
UBE4B-206ENST00000466379 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
UBE4B-206ENST00000466379 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
UBE4B-206ENST00000466379 KRT28Q7Z3Y7 464 aa17.31■□□□□ 0.36
UBE4B-206ENST00000466379 IP6K1Q92551 441 aa17.31■□□□□ 0.36
UBE4B-206ENST00000466379 RTL1A6NKG5 1358 aa17.31■□□□□ 0.36
UBE4B-206ENST00000466379 CRB1P82279 1406 aa17.3■□□□□ 0.36
UBE4B-206ENST00000466379 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
UBE4B-206ENST00000466379 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
UBE4B-206ENST00000466379 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms