RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 EVA1CP58658 441 aa10.22□□□□□ -0.77
RPUSD3-212ENST00000466141 ERICH6BQ5W0A0 696 aa10.22□□□□□ -0.77
RPUSD3-212ENST00000466141 BARGINQ6ZT62 677 aa10.22□□□□□ -0.77
RPUSD3-212ENST00000466141 WASLO00401 505 aaPredicted RBP10.21□□□□□ -0.77
RPUSD3-212ENST00000466141 ZBTB7AO95365 584 aa10.21□□□□□ -0.77
RPUSD3-212ENST00000466141 PTF1AQ7RTS3 328 aa10.21□□□□□ -0.77
RPUSD3-212ENST00000466141 TRPM1Q7Z4N2 1603 aa10.21□□□□□ -0.78
RPUSD3-212ENST00000466141 ATP7BP35670 1465 aa10.2□□□□□ -0.78
RPUSD3-212ENST00000466141 FGD1P98174 961 aa10.2□□□□□ -0.78
RPUSD3-212ENST00000466141 EIF3AQ14152 1382 aaKnown RBP10.2□□□□□ -0.78
RPUSD3-212ENST00000466141 TCP11L2Q8N4U5 519 aa10.2□□□□□ -0.78
RPUSD3-212ENST00000466141 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
RPUSD3-212ENST00000466141 PEAK1Q9H792 1746 aa10.19□□□□□ -0.78
RPUSD3-212ENST00000466141 LMO7Q8WWI1 1683 aa10.19□□□□□ -0.78
RPUSD3-212ENST00000466141 PTGER2P43116 358 aa10.19□□□□□ -0.78
RPUSD3-212ENST00000466141 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
RPUSD3-212ENST00000466141 PARP4Q9UKK3 1724 aaKnown RBP10.19□□□□□ -0.78
RPUSD3-212ENST00000466141 UTRNP46939 3433 aa10.18□□□□□ -0.78
RPUSD3-212ENST00000466141 C1QTNF8P60827 252 aa10.18□□□□□ -0.78
RPUSD3-212ENST00000466141 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
RPUSD3-212ENST00000466141 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
RPUSD3-212ENST00000466141 CEP350Q5VT06 3117 aa10.18□□□□□ -0.78
RPUSD3-212ENST00000466141 OVOS2A0A0G2JMS6 1433 aa10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 OVOS2A0A0J9YW53 1432 aa10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 OVOS2Q6IE36 1432 aa10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 RGPD3A6NKT7 1758 aaPredicted RBP10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 RGPD4Q7Z3J3 1758 aa10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 ITSN1Q15811 1721 aa10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 FHDC1Q9C0D6 1143 aaPredicted RBP10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 BCL11BQ9C0K0 894 aaPredicted RBP10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 LRRC37A3O60309 1634 aa10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 COL5A2P05997 1499 aaPredicted RBP10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 SBF2Q86WG5 1849 aa10.17□□□□□ -0.78
RPUSD3-212ENST00000466141 PLSCR1O15162 318 aa10.16□□□□□ -0.78
RPUSD3-212ENST00000466141 HSP90B1P14625 803 aaKnown RBP10.16□□□□□ -0.78
RPUSD3-212ENST00000466141 PROM2Q8N271 834 aa10.16□□□□□ -0.78
RPUSD3-212ENST00000466141 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
RPUSD3-212ENST00000466141 CPDO75976 1380 aa10.15□□□□□ -0.78
RPUSD3-212ENST00000466141 ACEP12821 1306 aa10.15□□□□□ -0.78
RPUSD3-212ENST00000466141 ZBTB7CA1YPR0 619 aa10.15□□□□□ -0.78
RPUSD3-212ENST00000466141 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
RPUSD3-212ENST00000466141 DCAF11Q8TEB1 546 aa10.15□□□□□ -0.78
RPUSD3-212ENST00000466141 SYT17Q9BSW7 474 aa10.15□□□□□ -0.78
RPUSD3-212ENST00000466141 TOPAZ1Q8N9V7 1692 aa10.15□□□□□ -0.79
RPUSD3-212ENST00000466141 USP19O94966 1318 aa10.14□□□□□ -0.79
RPUSD3-212ENST00000466141 ABTB2Q8N961 1025 aa10.14□□□□□ -0.79
RPUSD3-212ENST00000466141 SIN3AQ96ST3 1273 aa10.14□□□□□ -0.79
RPUSD3-212ENST00000466141 PCGF6Q9BYE7 350 aa10.14□□□□□ -0.79
RPUSD3-212ENST00000466141 THRAP3Q9Y2W1 955 aaKnown RBP10.14□□□□□ -0.79
RPUSD3-212ENST00000466141 QRICH2Q9H0J4 1663 aa10.14□□□□□ -0.79
RPUSD3-212ENST00000466141 CRB1P82279 1406 aa10.14□□□□□ -0.79
RPUSD3-212ENST00000466141 POLR3AO14802 1390 aaPredicted RBP10.14□□□□□ -0.79
RPUSD3-212ENST00000466141 SAMD1Q6SPF0 538 aaPredicted RBP10.13□□□□□ -0.79
RPUSD3-212ENST00000466141 CDK19Q9BWU1 502 aa10.13□□□□□ -0.79
RPUSD3-212ENST00000466141 CHD4Q14839 1912 aa10.12□□□□□ -0.79
RPUSD3-212ENST00000466141 GCP02774 474 aa10.12□□□□□ -0.79
RPUSD3-212ENST00000466141 DDB1Q16531 1140 aa10.12□□□□□ -0.79
RPUSD3-212ENST00000466141 TXNRD1Q16881 649 aa10.12□□□□□ -0.79
RPUSD3-212ENST00000466141 MARCH10Q8NA82 808 aaPredicted RBP10.12□□□□□ -0.79
RPUSD3-212ENST00000466141 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
RPUSD3-212ENST00000466141 SGIP1Q9BQI5 828 aa10.12□□□□□ -0.79
RPUSD3-212ENST00000466141 STK32BQ9NY57 414 aa10.12□□□□□ -0.79
RPUSD3-212ENST00000466141 SLC15A2Q16348 729 aa10.11□□□□□ -0.79
RPUSD3-212ENST00000466141 TSHZ2Q9NRE2 1034 aa10.11□□□□□ -0.79
RPUSD3-212ENST00000466141 WNK3Q9BYP7 1800 aa10.1□□□□□ -0.79
RPUSD3-212ENST00000466141 C11orf95C9JLR9 678 aaPredicted RBP10.1□□□□□ -0.79
RPUSD3-212ENST00000466141 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
RPUSD3-212ENST00000466141 MTFR1LQ9H019 292 aa10.1□□□□□ -0.79
RPUSD3-212ENST00000466141 AKAP12Q02952 1782 aa10.09□□□□□ -0.79
RPUSD3-212ENST00000466141 PLEKHG3A1L390 1219 aa10.09□□□□□ -0.79
RPUSD3-212ENST00000466141 NLRP13Q86W25 1043 aa10.09□□□□□ -0.79
RPUSD3-212ENST00000466141 CCDC61Q9Y6R9 512 aa10.09□□□□□ -0.79
RPUSD3-212ENST00000466141 TONSLQ96HA7 1378 aa10.09□□□□□ -0.79
RPUSD3-212ENST00000466141 CLSPNQ9HAW4 1339 aa10.08□□□□□ -0.8
RPUSD3-212ENST00000466141 GIGYF1O75420 1035 aaPredicted RBP10.08□□□□□ -0.8
RPUSD3-212ENST00000466141 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
RPUSD3-212ENST00000466141 AXIN2Q9Y2T1 843 aa10.08□□□□□ -0.8
RPUSD3-212ENST00000466141 PPIP5K1Q6PFW1 1433 aa10.07□□□□□ -0.8
RPUSD3-212ENST00000466141 COL18A1P39060 1754 aa10.07□□□□□ -0.8
RPUSD3-212ENST00000466141 AATKQ6ZMQ8 1374 aa10.07□□□□□ -0.8
RPUSD3-212ENST00000466141 GPR162Q16538 588 aa10.07□□□□□ -0.8
RPUSD3-212ENST00000466141 BCCIPQ9P287 314 aaKnown RBP eCLIP10.07□□□□□ -0.8
RPUSD3-212ENST00000466141 SLIT3O75094 1523 aa10.07□□□□□ -0.8
RPUSD3-212ENST00000466141 BCL9O00512 1426 aa10.07□□□□□ -0.8
RPUSD3-212ENST00000466141 NBPF1Q3BBV0 1214 aa10.06□□□□□ -0.8
RPUSD3-212ENST00000466141 SHANK3Q9BYB0 1731 aa10.06□□□□□ -0.8
RPUSD3-212ENST00000466141 PAPPAQ13219 1627 aa10.06□□□□□ -0.8
RPUSD3-212ENST00000466141 WDR17Q8IZU2 1322 aa10.06□□□□□ -0.8
RPUSD3-212ENST00000466141 MAP3K5Q99683 1374 aa10.05□□□□□ -0.8
RPUSD3-212ENST00000466141 NLRP6P59044 892 aa10.05□□□□□ -0.8
RPUSD3-212ENST00000466141 ZNF827Q17R98 1081 aa10.05□□□□□ -0.8
RPUSD3-212ENST00000466141 DHX37Q8IY37 1157 aaKnown RBP10.05□□□□□ -0.8
RPUSD3-212ENST00000466141 ACSBG1Q96GR2 724 aa10.05□□□□□ -0.8
RPUSD3-212ENST00000466141 CABP2Q9NPB3 220 aa10.05□□□□□ -0.8
RPUSD3-212ENST00000466141 ROCK2O75116 1388 aaKnown RBP10.04□□□□□ -0.8
RPUSD3-212ENST00000466141 RGPD5Q99666 1765 aa10.04□□□□□ -0.8
RPUSD3-212ENST00000466141 PIK3C2AO00443 1686 aa10.04□□□□□ -0.8
RPUSD3-212ENST00000466141 NHSQ6T4R5 1651 aa10.04□□□□□ -0.8
RPUSD3-212ENST00000466141 SOX12O15370 315 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms