RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 TBC1D2BQ9UPU7 963 aa7.5□□□□□ -1.21
SAMM50-202ENST00000465768 PER1O15534 1290 aaPredicted RBP7.49□□□□□ -1.21
SAMM50-202ENST00000465768 GPR37L1O60883 481 aa7.49□□□□□ -1.21
SAMM50-202ENST00000465768 CTHP32929 405 aa7.49□□□□□ -1.21
SAMM50-202ENST00000465768 WDR4P57081 412 aaKnown RBP7.49□□□□□ -1.21
SAMM50-202ENST00000465768 LYPD8Q6UX82 237 aa7.49□□□□□ -1.21
SAMM50-202ENST00000465768 C1orf115Q9H7X2 142 aa7.49□□□□□ -1.21
SAMM50-202ENST00000465768 F12P00748 615 aaPredicted RBP7.48□□□□□ -1.21
SAMM50-202ENST00000465768 CDK15Q96Q40 435 aa7.48□□□□□ -1.21
SAMM50-202ENST00000465768 VSIG8P0DPA2 414 aa7.46□□□□□ -1.22
SAMM50-202ENST00000465768 ABL2P42684 1182 aa7.46□□□□□ -1.22
SAMM50-202ENST00000465768 VEGFBP49765 207 aa7.46□□□□□ -1.22
SAMM50-202ENST00000465768 NR5A1Q13285 461 aa7.46□□□□□ -1.22
SAMM50-202ENST00000465768 WWC1Q8IX03 1113 aa7.46□□□□□ -1.22
SAMM50-202ENST00000465768 PURBQ96QR8 312 aaKnown RBP7.46□□□□□ -1.22
SAMM50-202ENST00000465768 ERBB4Q15303 1308 aa7.46□□□□□ -1.22
SAMM50-202ENST00000465768 ARID3CA6NKF2 412 aa7.45□□□□□ -1.22
SAMM50-202ENST00000465768 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
SAMM50-202ENST00000465768 IRF5Q13568 498 aa7.45□□□□□ -1.22
SAMM50-202ENST00000465768 EPS8L1Q8TE68 723 aa7.45□□□□□ -1.22
SAMM50-202ENST00000465768 KLF16Q9BXK1 252 aaPredicted RBP7.45□□□□□ -1.22
SAMM50-202ENST00000465768 MAP10Q9P2G4 905 aa7.45□□□□□ -1.22
SAMM50-202ENST00000465768 NR6A1Q15406 480 aa7.44□□□□□ -1.22
SAMM50-202ENST00000465768 BPHLQ86WA6 291 aaPredicted RBP7.44□□□□□ -1.22
SAMM50-202ENST00000465768 ZNF330Q9Y3S2 320 aaPredicted RBP7.44□□□□□ -1.22
SAMM50-202ENST00000465768 ZIC2O95409 532 aaPredicted RBP7.43□□□□□ -1.22
SAMM50-202ENST00000465768 ARMC2Q8NEN0 867 aa7.43□□□□□ -1.22
SAMM50-202ENST00000465768 FOXJ1Q92949 421 aa7.43□□□□□ -1.22
SAMM50-202ENST00000465768 UPP2O95045 317 aa7.42□□□□□ -1.22
SAMM50-202ENST00000465768 ARID5BQ14865 1188 aa7.42□□□□□ -1.22
SAMM50-202ENST00000465768 AGERQ15109 404 aa7.42□□□□□ -1.22
SAMM50-202ENST00000465768 WASHC4Q2M389 1173 aa7.42□□□□□ -1.22
SAMM50-202ENST00000465768 NBPF14Q5TI25 921 aa7.42□□□□□ -1.22
SAMM50-202ENST00000465768 PNMA1Q8ND90 353 aa7.42□□□□□ -1.22
SAMM50-202ENST00000465768 ARXQ96QS3 562 aa7.42□□□□□ -1.22
SAMM50-202ENST00000465768 ZNF777Q9ULD5 760 aaPredicted RBP7.42□□□□□ -1.22
SAMM50-202ENST00000465768 ITPKCQ96DU7 683 aa7.41□□□□□ -1.22
SAMM50-202ENST00000465768 ZFAND3Q9H8U3 227 aa7.41□□□□□ -1.22
SAMM50-202ENST00000465768 MAP4K5Q9Y4K4 846 aa7.41□□□□□ -1.22
SAMM50-202ENST00000465768 ZC3H4Q9UPT8 1303 aaKnown RBP7.41□□□□□ -1.22
SAMM50-202ENST00000465768 MAN1A2O60476 641 aa7.4□□□□□ -1.22
SAMM50-202ENST00000465768 NR3C2P08235 984 aa7.4□□□□□ -1.22
SAMM50-202ENST00000465768 LINC00528Q8N1L1 170 aa7.4□□□□□ -1.22
SAMM50-202ENST00000465768 CCDC82Q8N4S0 544 aa7.4□□□□□ -1.22
SAMM50-202ENST00000465768 MEIOBQ8N635 442 aa7.4□□□□□ -1.22
SAMM50-202ENST00000465768 C1QTNF2Q9BXJ5 285 aa7.4□□□□□ -1.22
SAMM50-202ENST00000465768 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.22
SAMM50-202ENST00000465768 SOBPA7XYQ1 873 aa7.39□□□□□ -1.23
SAMM50-202ENST00000465768 POM121CA8CG34 1229 aa7.39□□□□□ -1.23
SAMM50-202ENST00000465768 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
SAMM50-202ENST00000465768 BMP2P12643 396 aa7.38□□□□□ -1.23
SAMM50-202ENST00000465768 FSHRP23945 695 aa7.38□□□□□ -1.23
SAMM50-202ENST00000465768 C6orf118Q5T5N4 469 aa7.38□□□□□ -1.23
SAMM50-202ENST00000465768 SH3RF1Q7Z6J0 888 aa7.38□□□□□ -1.23
SAMM50-202ENST00000465768 TRMT44Q8IYL2 757 aaKnown RBP7.38□□□□□ -1.23
SAMM50-202ENST00000465768 GRM5P41594 1212 aa7.37□□□□□ -1.23
SAMM50-202ENST00000465768 VAC14Q08AM6 782 aa7.37□□□□□ -1.23
SAMM50-202ENST00000465768 GPKOWQ92917 476 aaPredicted RBP eCLIP7.37□□□□□ -1.23
SAMM50-202ENST00000465768 GLMNQ92990 594 aa7.37□□□□□ -1.23
SAMM50-202ENST00000465768 SERPINA10Q9UK55 444 aa7.37□□□□□ -1.23
SAMM50-202ENST00000465768 SOX11P35716 441 aa7.36□□□□□ -1.23
SAMM50-202ENST00000465768 ADAMTS19Q8TE59 1207 aa7.36□□□□□ -1.23
SAMM50-202ENST00000465768 CCDC97Q96F63 343 aaPredicted RBP7.36□□□□□ -1.23
SAMM50-202ENST00000465768 EMILIN1Q9Y6C2 1016 aa7.36□□□□□ -1.23
SAMM50-202ENST00000465768 SOS2Q07890 1332 aaPredicted RBP7.35□□□□□ -1.23
SAMM50-202ENST00000465768 NR1H3Q13133 447 aa7.35□□□□□ -1.23
SAMM50-202ENST00000465768 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
SAMM50-202ENST00000465768 SH3BP5LQ7L8J4 393 aa7.35□□□□□ -1.23
SAMM50-202ENST00000465768 ARID3AQ99856 593 aa7.35□□□□□ -1.23
SAMM50-202ENST00000465768 TSEN34Q9BSV6 310 aaKnown RBP7.35□□□□□ -1.23
SAMM50-202ENST00000465768 ZBBXA8MT70 800 aa7.34□□□□□ -1.23
SAMM50-202ENST00000465768 PPFIA3O75145 1194 aa7.34□□□□□ -1.23
SAMM50-202ENST00000465768 FBXO45P0C2W1 286 aa7.34□□□□□ -1.23
SAMM50-202ENST00000465768 HOMEZQ8IX15 550 aa7.34□□□□□ -1.23
SAMM50-202ENST00000465768 CCDC116Q8IYX3 515 aa7.34□□□□□ -1.23
SAMM50-202ENST00000465768 CALR3Q96L12 384 aaKnown RBP7.34□□□□□ -1.23
SAMM50-202ENST00000465768 ALG2Q9H553 416 aa7.34□□□□□ -1.23
SAMM50-202ENST00000465768 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
SAMM50-202ENST00000465768 PDXDC2PQ6P474 469 aa7.33□□□□□ -1.24
SAMM50-202ENST00000465768 DNMT3LQ9UJW3 386 aa7.33□□□□□ -1.24
SAMM50-202ENST00000465768 MAGEB6P1A0A0J9YX57 407 aa7.32□□□□□ -1.24
SAMM50-202ENST00000465768 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.32□□□□□ -1.24
SAMM50-202ENST00000465768 EIF4G2P78344 907 aaKnown RBP eCLIP7.31□□□□□ -1.24
SAMM50-202ENST00000465768 HDGFL1Q5TGJ6 251 aa7.31□□□□□ -1.24
SAMM50-202ENST00000465768 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
SAMM50-202ENST00000465768 CDV3Q9UKY7 258 aaKnown RBP7.31□□□□□ -1.24
SAMM50-202ENST00000465768 PTK2Q05397 1052 aa7.3□□□□□ -1.24
SAMM50-202ENST00000465768 ERFEQ4G0M1 354 aa7.3□□□□□ -1.24
SAMM50-202ENST00000465768 OCSTAMPQ9BR26 566 aa7.3□□□□□ -1.24
SAMM50-202ENST00000465768 TTLL8A6PVC2 850 aa7.29□□□□□ -1.24
SAMM50-202ENST00000465768 RNF225M0QZC1 329 aaPredicted RBP7.29□□□□□ -1.24
SAMM50-202ENST00000465768 SEMA3FQ13275 785 aa7.29□□□□□ -1.24
SAMM50-202ENST00000465768 SLC10A4Q96EP9 437 aa7.29□□□□□ -1.24
SAMM50-202ENST00000465768 CARD14Q9BXL6 1004 aa7.29□□□□□ -1.24
SAMM50-202ENST00000465768 DHX9Q08211 1270 aaKnown RBP7.28□□□□□ -1.24
SAMM50-202ENST00000465768 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
SAMM50-202ENST00000465768 ZNF592Q92610 1267 aa7.28□□□□□ -1.24
SAMM50-202ENST00000465768 UCN2Q96RP3 112 aa7.28□□□□□ -1.24
SAMM50-202ENST00000465768 PPP1R26Q5T8A7 1209 aaPredicted RBP7.27□□□□□ -1.25
SAMM50-202ENST00000465768 Q6ZVU0 165 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms