RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PLPPR3Q6T4P5 718 aa23.86■■□□□ 1.41
TSPAN4-210ENST00000464987 RTL5Q5HYW3 569 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-210ENST00000464987 SLC26A8Q96RN1 970 aa23.84■■□□□ 1.41
TSPAN4-210ENST00000464987 TSPYL6Q8N831 410 aa23.83■■□□□ 1.4
TSPAN4-210ENST00000464987 DDX19BQ9UMR2 479 aa23.83■■□□□ 1.4
TSPAN4-210ENST00000464987 PTPRUQ92729 1446 aa23.83■■□□□ 1.4
TSPAN4-210ENST00000464987 NRKQ7Z2Y5 1582 aa23.83■■□□□ 1.4
TSPAN4-210ENST00000464987 TOPAZ1Q8N9V7 1692 aa23.82■■□□□ 1.4
TSPAN4-210ENST00000464987 PLEKHG1Q9ULL1 1385 aa23.82■■□□□ 1.4
TSPAN4-210ENST00000464987 ZNF692Q9BU19 519 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-210ENST00000464987 ACEP12821 1306 aa23.81■■□□□ 1.4
TSPAN4-210ENST00000464987 FAM83GA6ND36 823 aa23.81■■□□□ 1.4
TSPAN4-210ENST00000464987 KIF16BQ96L93 1317 aa23.8■■□□□ 1.4
TSPAN4-210ENST00000464987 PRKCSHP14314 528 aaPredicted RBP23.8■■□□□ 1.4
TSPAN4-210ENST00000464987 ALDH1L2Q3SY69 923 aa23.8■■□□□ 1.4
TSPAN4-210ENST00000464987 ELL2O00472 640 aaPredicted RBP23.8■■□□□ 1.4
TSPAN4-210ENST00000464987 VAMP4O75379 141 aa23.79■■□□□ 1.4
TSPAN4-210ENST00000464987 MBIPQ9NS73 344 aa23.79■■□□□ 1.4
TSPAN4-210ENST00000464987 TTC21BQ7Z4L5 1316 aa23.79■■□□□ 1.4
TSPAN4-210ENST00000464987 DCTN1Q14203 1278 aa23.78■■□□□ 1.4
TSPAN4-210ENST00000464987 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
TSPAN4-210ENST00000464987 ZBTB40Q9NUA8 1239 aa23.78■■□□□ 1.4
TSPAN4-210ENST00000464987 ZNF853P0CG23 659 aa23.76■■□□□ 1.39
TSPAN4-210ENST00000464987 DAXXQ9UER7 740 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-210ENST00000464987 RGPD8O14715 1765 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-210ENST00000464987 IPO8O15397 1037 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-210ENST00000464987 HDAC1Q13547 482 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-210ENST00000464987 PEAK1Q9H792 1746 aa23.75■■□□□ 1.39
TSPAN4-210ENST00000464987 EIF4A2Q14240 407 aaKnown RBP23.75■■□□□ 1.39
TSPAN4-210ENST00000464987 IFT57Q9NWB7 429 aa23.75■■□□□ 1.39
TSPAN4-210ENST00000464987 GNAI1P63096 354 aa23.75■■□□□ 1.39
TSPAN4-210ENST00000464987 MRPL50Q8N5N7 158 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-210ENST00000464987 OVOS2A0A0J9YW53 1432 aa23.74■■□□□ 1.39
TSPAN4-210ENST00000464987 OVOS2Q6IE36 1432 aa23.74■■□□□ 1.39
TSPAN4-210ENST00000464987 SOX12O15370 315 aa23.74■■□□□ 1.39
TSPAN4-210ENST00000464987 USP6P35125 1406 aa23.73■■□□□ 1.39
TSPAN4-210ENST00000464987 PLEKHG3A1L390 1219 aa23.73■■□□□ 1.39
TSPAN4-210ENST00000464987 C8orf58Q8NAV2 365 aa23.72■■□□□ 1.39
TSPAN4-210ENST00000464987 AMOTL2Q9Y2J4 779 aa23.72■■□□□ 1.39
TSPAN4-210ENST00000464987 NALCNQ8IZF0 1738 aa23.72■■□□□ 1.39
TSPAN4-210ENST00000464987 BRPF1P55201 1214 aaPredicted RBP23.72■■□□□ 1.39
TSPAN4-210ENST00000464987 CALD1Q05682 793 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-210ENST00000464987 SULT6B1Q6IMI4 303 aa23.72■■□□□ 1.39
TSPAN4-210ENST00000464987 HSP90AB2PQ58FF8 381 aa23.71■■□□□ 1.39
TSPAN4-210ENST00000464987 CFAP44Q96MT7 982 aa23.71■■□□□ 1.39
TSPAN4-210ENST00000464987 EID1Q9Y6B2 187 aa23.71■■□□□ 1.39
TSPAN4-210ENST00000464987 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.38
TSPAN4-210ENST00000464987 TWISTNBQ3B726 338 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-210ENST00000464987 SMC5Q8IY18 1101 aa23.7■■□□□ 1.38
TSPAN4-210ENST00000464987 ZNF428Q96B54 188 aa23.7■■□□□ 1.38
TSPAN4-210ENST00000464987 SLIT1O75093 1534 aa23.68■■□□□ 1.38
TSPAN4-210ENST00000464987 NFKBIBQ15653 356 aa23.68■■□□□ 1.38
TSPAN4-210ENST00000464987 LMOD3Q0VAK6 560 aa23.67■■□□□ 1.38
TSPAN4-210ENST00000464987 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
TSPAN4-210ENST00000464987 C1orf115Q9H7X2 142 aa23.67■■□□□ 1.38
TSPAN4-210ENST00000464987 ARHGAP23Q9P227 1491 aa23.67■■□□□ 1.38
TSPAN4-210ENST00000464987 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
TSPAN4-210ENST00000464987 ZBTB7BO15156 539 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-210ENST00000464987 SSH2Q76I76 1423 aa23.66■■□□□ 1.38
TSPAN4-210ENST00000464987 RGPD1P0DJD0 1748 aa23.66■■□□□ 1.38
TSPAN4-210ENST00000464987 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
TSPAN4-210ENST00000464987 MCM10Q7L590 875 aa23.64■■□□□ 1.37
TSPAN4-210ENST00000464987 TBC1D32Q96NH3 1257 aa23.64■■□□□ 1.37
TSPAN4-210ENST00000464987 RIMS1Q86UR5 1692 aaKnown RBP23.64■■□□□ 1.37
TSPAN4-210ENST00000464987 USP31Q70CQ4 1352 aa23.63■■□□□ 1.37
TSPAN4-210ENST00000464987 PIK3R4Q99570 1358 aa23.63■■□□□ 1.37
TSPAN4-210ENST00000464987 ARHGAP45Q92619 1136 aa23.63■■□□□ 1.37
TSPAN4-210ENST00000464987 TBX22Q9Y458 520 aa23.63■■□□□ 1.37
TSPAN4-210ENST00000464987 FMN2Q9NZ56 1722 aa23.63■■□□□ 1.37
TSPAN4-210ENST00000464987 DIP2AQ14689 1571 aa23.63■■□□□ 1.37
TSPAN4-210ENST00000464987 LNPKQ9C0E8 428 aa23.62■■□□□ 1.37
TSPAN4-210ENST00000464987 ABCC4O15439 1325 aa23.62■■□□□ 1.37
TSPAN4-210ENST00000464987 MAP3K19Q56UN5 1328 aa23.61■■□□□ 1.37
TSPAN4-210ENST00000464987 NUCB1Q02818 461 aa23.6■■□□□ 1.37
TSPAN4-210ENST00000464987 UPF2Q9HAU5 1272 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-210ENST00000464987 NGDNQ8NEJ9 315 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-210ENST00000464987 PIK3C2AO00443 1686 aa23.58■■□□□ 1.37
TSPAN4-210ENST00000464987 SIRT2Q8IXJ6 389 aa23.58■■□□□ 1.37
TSPAN4-210ENST00000464987 FOXO3O43524 673 aa23.57■■□□□ 1.36
TSPAN4-210ENST00000464987 MFAP1P55081 439 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-210ENST00000464987 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-210ENST00000464987 XRN1Q8IZH2 1706 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-210ENST00000464987 CHD1LQ86WJ1 897 aa23.56■■□□□ 1.36
TSPAN4-210ENST00000464987 TTC21AQ8NDW8 1320 aa23.56■■□□□ 1.36
TSPAN4-210ENST00000464987 CHL1O00533 1208 aa23.55■■□□□ 1.36
TSPAN4-210ENST00000464987 FRAT2O75474 233 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-210ENST00000464987 KCNA6P17658 529 aa23.55■■□□□ 1.36
TSPAN4-210ENST00000464987 MIS18AQ9NYP9 233 aa23.54■■□□□ 1.36
TSPAN4-210ENST00000464987 ANKRD45Q5TZF3 282 aa23.53■■□□□ 1.36
TSPAN4-210ENST00000464987 SLKQ9H2G2 1235 aaPredicted RBP23.53■■□□□ 1.36
TSPAN4-210ENST00000464987 BECN1Q14457 450 aa23.53■■□□□ 1.36
TSPAN4-210ENST00000464987 NUTM2GQ5VZR2 741 aa23.53■■□□□ 1.36
TSPAN4-210ENST00000464987 TBC1D2Q9BYX2 928 aa23.53■■□□□ 1.36
TSPAN4-210ENST00000464987 MTHFSDQ2M296 383 aaKnown RBP23.52■■□□□ 1.36
TSPAN4-210ENST00000464987 API5Q9BZZ5 524 aaKnown RBP23.52■■□□□ 1.36
TSPAN4-210ENST00000464987 MARF1Q9Y4F3 1742 aaKnown RBP23.52■■□□□ 1.36
TSPAN4-210ENST00000464987 CEP170BQ9Y4F5 1589 aaPredicted RBP23.52■■□□□ 1.36
TSPAN4-210ENST00000464987 CRB1P82279 1406 aa23.51■■□□□ 1.35
TSPAN4-210ENST00000464987 SBNO1A3KN83 1393 aa23.51■■□□□ 1.35
TSPAN4-210ENST00000464987 FLT4P35916 1363 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms