RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 PIK3C2AO00443 1686 aa18.39■□□□□ 0.53
NIN-208ENST00000463419 EVA1CP58658 441 aa18.38■□□□□ 0.53
NIN-208ENST00000463419 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
NIN-208ENST00000463419 SLIT3O75094 1523 aa18.38■□□□□ 0.53
NIN-208ENST00000463419 THSD7AQ9UPZ6 1657 aa18.37■□□□□ 0.53
NIN-208ENST00000463419 HAX1O00165 279 aa18.37■□□□□ 0.53
NIN-208ENST00000463419 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
NIN-208ENST00000463419 LARP1Q6PKG0 1096 aaKnown RBP18.36■□□□□ 0.53
NIN-208ENST00000463419 USP35Q9P2H5 1018 aa18.36■□□□□ 0.53
NIN-208ENST00000463419 AKAP12Q02952 1782 aa18.36■□□□□ 0.53
NIN-208ENST00000463419 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
NIN-208ENST00000463419 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
NIN-208ENST00000463419 CD163L1Q9NR16 1453 aa18.34■□□□□ 0.53
NIN-208ENST00000463419 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
NIN-208ENST00000463419 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.53
NIN-208ENST00000463419 ST20-MTHFSA0A0A6YYL1 179 aa18.33■□□□□ 0.53
NIN-208ENST00000463419 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.53
NIN-208ENST00000463419 TMC1Q8TDI8 760 aa18.33■□□□□ 0.53
NIN-208ENST00000463419 TESK2Q96S53 571 aa18.33■□□□□ 0.53
NIN-208ENST00000463419 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
NIN-208ENST00000463419 BARGINQ6ZT62 677 aa18.32■□□□□ 0.52
NIN-208ENST00000463419 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
NIN-208ENST00000463419 AATKQ6ZMQ8 1374 aa18.32■□□□□ 0.52
NIN-208ENST00000463419 PUS7Q96PZ0 661 aaKnown RBP18.31■□□□□ 0.52
NIN-208ENST00000463419 MKRN4PQ13434 485 aaPredicted RBP18.3■□□□□ 0.52
NIN-208ENST00000463419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.3■□□□□ 0.52
NIN-208ENST00000463419 TCP11L2Q8N4U5 519 aa18.3■□□□□ 0.52
NIN-208ENST00000463419 KCNH5Q8NCM2 988 aa18.3■□□□□ 0.52
NIN-208ENST00000463419 PCGF6Q9BYE7 350 aa18.3■□□□□ 0.52
NIN-208ENST00000463419 MON2Q7Z3U7 1717 aa18.3■□□□□ 0.52
NIN-208ENST00000463419 SOX12O15370 315 aa18.29■□□□□ 0.52
NIN-208ENST00000463419 HDGFL2Q7Z4V5 671 aaPredicted RBP18.29■□□□□ 0.52
NIN-208ENST00000463419 ARHGEF25Q86VW2 580 aa18.29■□□□□ 0.52
NIN-208ENST00000463419 ZRANB1Q9UGI0 708 aa18.29■□□□□ 0.52
NIN-208ENST00000463419 AXIN2Q9Y2T1 843 aa18.29■□□□□ 0.52
NIN-208ENST00000463419 THRAP3Q9Y2W1 955 aaKnown RBP18.28■□□□□ 0.52
NIN-208ENST00000463419 CRB1P82279 1406 aa18.28■□□□□ 0.52
NIN-208ENST00000463419 A0A1W2PP64 1363 aa18.27■□□□□ 0.52
NIN-208ENST00000463419 NME9Q86XW9 330 aa18.27■□□□□ 0.52
NIN-208ENST00000463419 NFAT5O94916 1531 aa18.27■□□□□ 0.52
NIN-208ENST00000463419 COL18A1P39060 1754 aa18.27■□□□□ 0.52
NIN-208ENST00000463419 USP31Q70CQ4 1352 aa18.27■□□□□ 0.51
NIN-208ENST00000463419 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
NIN-208ENST00000463419 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
NIN-208ENST00000463419 USP47Q96K76 1375 aa18.26■□□□□ 0.51
NIN-208ENST00000463419 CLSPNQ9HAW4 1339 aa18.25■□□□□ 0.51
NIN-208ENST00000463419 BAG6P46379 1132 aa18.24■□□□□ 0.51
NIN-208ENST00000463419 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
NIN-208ENST00000463419 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
NIN-208ENST00000463419 WDR17Q8IZU2 1322 aa18.24■□□□□ 0.51
NIN-208ENST00000463419 FAM196AQ6ZSG2 479 aa18.23■□□□□ 0.51
NIN-208ENST00000463419 TOM1L2Q6ZVM7 507 aa18.23■□□□□ 0.51
NIN-208ENST00000463419 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
NIN-208ENST00000463419 NINLQ9Y2I6 1382 aa18.22■□□□□ 0.51
NIN-208ENST00000463419 RGPD1P0DJD0 1748 aa18.21■□□□□ 0.51
NIN-208ENST00000463419 TRIM37O94972 964 aa18.21■□□□□ 0.51
NIN-208ENST00000463419 TMF1P82094 1093 aa18.21■□□□□ 0.51
NIN-208ENST00000463419 EN1Q05925 392 aaPredicted RBP18.21■□□□□ 0.51
NIN-208ENST00000463419 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
NIN-208ENST00000463419 CSB-PGBD3P0DP91 1061 aa18.2■□□□□ 0.5
NIN-208ENST00000463419 CLEC11AQ9Y240 323 aa18.2■□□□□ 0.5
NIN-208ENST00000463419 TNS1Q9HBL0 1735 aaKnown RBP18.19■□□□□ 0.5
NIN-208ENST00000463419 ABCC6O95255 1503 aa18.19■□□□□ 0.5
NIN-208ENST00000463419 OVOS2A0A0J9YW53 1432 aa18.18■□□□□ 0.5
NIN-208ENST00000463419 DISP2A7MBM2 1401 aa18.18■□□□□ 0.5
NIN-208ENST00000463419 OVOS2Q6IE36 1432 aa18.18■□□□□ 0.5
NIN-208ENST00000463419 SPDYE1Q8NFV5 336 aaPredicted RBP18.18■□□□□ 0.5
NIN-208ENST00000463419 CARD10Q9BWT7 1032 aa18.18■□□□□ 0.5
NIN-208ENST00000463419 RGPD5Q99666 1765 aa18.17■□□□□ 0.5
NIN-208ENST00000463419 DDB1Q16531 1140 aa18.17■□□□□ 0.5
NIN-208ENST00000463419 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
NIN-208ENST00000463419 LRRC37A3O60309 1634 aa18.17■□□□□ 0.5
NIN-208ENST00000463419 EZH2Q15910 746 aaKnown RBP18.16■□□□□ 0.5
NIN-208ENST00000463419 APBA3O96018 575 aa18.15■□□□□ 0.5
NIN-208ENST00000463419 SSUH2Q9Y2M2 353 aa18.15■□□□□ 0.5
NIN-208ENST00000463419 OVOS2A0A0G2JMS6 1433 aa18.14■□□□□ 0.49
NIN-208ENST00000463419 ERBB3P21860 1342 aa18.14■□□□□ 0.49
NIN-208ENST00000463419 CAMKK2Q96RR4 588 aa18.14■□□□□ 0.49
NIN-208ENST00000463419 CDCA7Q9BWT1 371 aaPredicted RBP18.14■□□□□ 0.49
NIN-208ENST00000463419 SRCAPQ6ZRS2 3230 aa18.13■□□□□ 0.49
NIN-208ENST00000463419 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
NIN-208ENST00000463419 CDCA8Q53HL2 280 aa18.13■□□□□ 0.49
NIN-208ENST00000463419 CCER1Q8TC90 406 aaPredicted RBP18.13■□□□□ 0.49
NIN-208ENST00000463419 COG3Q96JB2 828 aa18.13■□□□□ 0.49
NIN-208ENST00000463419 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
NIN-208ENST00000463419 LTN1O94822 1766 aa18.12■□□□□ 0.49
NIN-208ENST00000463419 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
NIN-208ENST00000463419 ANKRD24Q8TF21 1146 aa18.12■□□□□ 0.49
NIN-208ENST00000463419 PSDA5PKW4 1024 aaPredicted RBP18.11■□□□□ 0.49
NIN-208ENST00000463419 C11orf95C9JLR9 678 aaPredicted RBP18.11■□□□□ 0.49
NIN-208ENST00000463419 PRKAR2AP13861 404 aaKnown RBP18.11■□□□□ 0.49
NIN-208ENST00000463419 EVX2Q03828 476 aa18.11■□□□□ 0.49
NIN-208ENST00000463419 MARCH10Q8NA82 808 aaPredicted RBP18.11■□□□□ 0.49
NIN-208ENST00000463419 NLRP2Q9NX02 1062 aa18.11■□□□□ 0.49
NIN-208ENST00000463419 FBLN1P23142 703 aa18.1■□□□□ 0.49
NIN-208ENST00000463419 PARD3Q8TEW0 1356 aa18.1■□□□□ 0.49
NIN-208ENST00000463419 FYB1O15117 783 aa18.09■□□□□ 0.49
NIN-208ENST00000463419 IP6K1Q92551 441 aa18.09■□□□□ 0.49
NIN-208ENST00000463419 EXOC5O00471 708 aa18.08■□□□□ 0.49
NIN-208ENST00000463419 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms