RNA–Protein interactions for RNA: ENST00000462852.5

VPS45-205, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-205ENST00000462852 MED14O60244 1454 aa12.13□□□□□ -0.47
VPS45-205ENST00000462852 NPHP4O75161 1426 aaPredicted RBP12.12□□□□□ -0.47
VPS45-205ENST00000462852 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
VPS45-205ENST00000462852 ZBED2Q9BTP6 218 aa12.12□□□□□ -0.47
VPS45-205ENST00000462852 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
VPS45-205ENST00000462852 ARIH1Q9Y4X5 557 aaPredicted RBP12.12□□□□□ -0.47
VPS45-205ENST00000462852 MED1Q15648 1581 aaPredicted RBP12.12□□□□□ -0.47
VPS45-205ENST00000462852 DDX12PQ92771 950 aa12.11□□□□□ -0.47
VPS45-205ENST00000462852 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
VPS45-205ENST00000462852 SPDYE16A6NNV3 312 aaPredicted RBP12.09□□□□□ -0.47
VPS45-205ENST00000462852 EPAS1Q99814 870 aa12.09□□□□□ -0.47
VPS45-205ENST00000462852 COL9A1P20849 921 aa12.08□□□□□ -0.48
VPS45-205ENST00000462852 IDI1Q13907 227 aa12.08□□□□□ -0.48
VPS45-205ENST00000462852 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
VPS45-205ENST00000462852 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
VPS45-205ENST00000462852 SLC52A1Q9NWF4 448 aa12.06□□□□□ -0.48
VPS45-205ENST00000462852 ALKQ9UM73 1620 aa12.06□□□□□ -0.48
VPS45-205ENST00000462852 MYOM1P52179 1685 aa12.06□□□□□ -0.48
VPS45-205ENST00000462852 ADGRF5Q8IZF2 1346 aa12.06□□□□□ -0.48
VPS45-205ENST00000462852 RIMS2Q9UQ26 1411 aa12.05□□□□□ -0.48
VPS45-205ENST00000462852 QRICH2Q9H0J4 1663 aa12.05□□□□□ -0.48
VPS45-205ENST00000462852 XRN1Q8IZH2 1706 aaKnown RBP12.04□□□□□ -0.48
VPS45-205ENST00000462852 C6orf132Q5T0Z8 1188 aa12.04□□□□□ -0.48
VPS45-205ENST00000462852 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
VPS45-205ENST00000462852 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
VPS45-205ENST00000462852 NBR1Q14596 966 aa12.03□□□□□ -0.48
VPS45-205ENST00000462852 DCAF11Q8TEB1 546 aa12.03□□□□□ -0.48
VPS45-205ENST00000462852 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
VPS45-205ENST00000462852 DIP2AQ14689 1571 aa12.03□□□□□ -0.48
VPS45-205ENST00000462852 USP47Q96K76 1375 aa12.03□□□□□ -0.48
VPS45-205ENST00000462852 TMEM2Q9UHN6 1383 aa12.03□□□□□ -0.48
VPS45-205ENST00000462852 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
VPS45-205ENST00000462852 SCAF11Q99590 1463 aaKnown RBP12.02□□□□□ -0.48
VPS45-205ENST00000462852 PROX2Q3B8N5 592 aa12.02□□□□□ -0.49
VPS45-205ENST00000462852 RGL3Q3MIN7 710 aa12.02□□□□□ -0.49
VPS45-205ENST00000462852 EN1Q05925 392 aaPredicted RBP12.01□□□□□ -0.49
VPS45-205ENST00000462852 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
VPS45-205ENST00000462852 RPGRIP1LQ68CZ1 1315 aa12.01□□□□□ -0.49
VPS45-205ENST00000462852 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
VPS45-205ENST00000462852 STAC3Q96MF2 364 aa12□□□□□ -0.49
VPS45-205ENST00000462852 ROCK2O75116 1388 aaKnown RBP12□□□□□ -0.49
VPS45-205ENST00000462852 DLC1Q96QB1 1528 aa12□□□□□ -0.49
VPS45-205ENST00000462852 TXNDC2Q86VQ3 553 aa11.99□□□□□ -0.49
VPS45-205ENST00000462852 KCNV2Q8TDN2 545 aa11.99□□□□□ -0.49
VPS45-205ENST00000462852 KCTD12Q96CX2 325 aaKnown RBP11.99□□□□□ -0.49
VPS45-205ENST00000462852 NWD1Q149M9 1564 aa11.98□□□□□ -0.49
VPS45-205ENST00000462852 TULP4Q9NRJ4 1543 aa11.98□□□□□ -0.49
VPS45-205ENST00000462852 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
VPS45-205ENST00000462852 NBPF1Q3BBV0 1214 aa11.98□□□□□ -0.49
VPS45-205ENST00000462852 TECPR2O15040 1411 aa11.97□□□□□ -0.49
VPS45-205ENST00000462852 GRXCR2A6NFK2 248 aa11.97□□□□□ -0.49
VPS45-205ENST00000462852 MAP3K7O43318 606 aa11.97□□□□□ -0.49
VPS45-205ENST00000462852 STRCP1A6NGW2 1772 aa11.97□□□□□ -0.49
VPS45-205ENST00000462852 ADGRB2O60241 1585 aa11.96□□□□□ -0.49
VPS45-205ENST00000462852 PLEKHG1Q9ULL1 1385 aa11.96□□□□□ -0.49
VPS45-205ENST00000462852 HSPA5P11021 654 aaKnown RBP11.96□□□□□ -0.49
VPS45-205ENST00000462852 LTKP29376 864 aa11.96□□□□□ -0.49
VPS45-205ENST00000462852 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
VPS45-205ENST00000462852 RABGEF1Q9UJ41 708 aa11.96□□□□□ -0.49
VPS45-205ENST00000462852 KDM2AQ9Y2K7 1162 aa11.96□□□□□ -0.49
VPS45-205ENST00000462852 ZNF326Q5BKZ1 582 aaKnown RBP11.95□□□□□ -0.5
VPS45-205ENST00000462852 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
VPS45-205ENST00000462852 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
VPS45-205ENST00000462852 SBNO2Q9Y2G9 1366 aa11.94□□□□□ -0.5
VPS45-205ENST00000462852 OSBPP22059 807 aa11.94□□□□□ -0.5
VPS45-205ENST00000462852 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
VPS45-205ENST00000462852 CHD2O14647 1828 aaKnown RBP11.94□□□□□ -0.5
VPS45-205ENST00000462852 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
VPS45-205ENST00000462852 CFAP70Q5T0N1 1121 aa11.93□□□□□ -0.5
VPS45-205ENST00000462852 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
VPS45-205ENST00000462852 YTHDC2Q9H6S0 1430 aaKnown RBP11.93□□□□□ -0.5
VPS45-205ENST00000462852 TOPAZ1Q8N9V7 1692 aa11.92□□□□□ -0.5
VPS45-205ENST00000462852 TESK2Q96S53 571 aa11.92□□□□□ -0.5
VPS45-205ENST00000462852 PTPRUQ92729 1446 aa11.92□□□□□ -0.5
VPS45-205ENST00000462852 CCDC7Q96M83 1385 aa11.92□□□□□ -0.5
VPS45-205ENST00000462852 TRIM6-TRIM34B2RNG4 842 aa11.91□□□□□ -0.5
VPS45-205ENST00000462852 C11orf95C9JLR9 678 aaPredicted RBP11.91□□□□□ -0.5
VPS45-205ENST00000462852 KCNA6P17658 529 aa11.91□□□□□ -0.5
VPS45-205ENST00000462852 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
VPS45-205ENST00000462852 NALCNQ8IZF0 1738 aa11.91□□□□□ -0.5
VPS45-205ENST00000462852 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.91□□□□□ -0.5
VPS45-205ENST00000462852 METP08581 1390 aa11.91□□□□□ -0.5
VPS45-205ENST00000462852 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
VPS45-205ENST00000462852 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
VPS45-205ENST00000462852 ONECUT3O60422 494 aaPredicted RBP11.9□□□□□ -0.5
VPS45-205ENST00000462852 EIF4G2P78344 907 aaKnown RBP eCLIP11.9□□□□□ -0.5
VPS45-205ENST00000462852 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
VPS45-205ENST00000462852 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
VPS45-205ENST00000462852 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
VPS45-205ENST00000462852 THSD4Q6ZMP0 1018 aa11.89□□□□□ -0.51
VPS45-205ENST00000462852 WNT2BQ93097 391 aa11.89□□□□□ -0.51
VPS45-205ENST00000462852 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
VPS45-205ENST00000462852 RGS17Q9UGC6 210 aaPredicted RBP11.89□□□□□ -0.51
VPS45-205ENST00000462852 LRPPRCP42704 1394 aaKnown RBP11.89□□□□□ -0.51
VPS45-205ENST00000462852 GOLGA8CPA6NN73 597 aa11.88□□□□□ -0.51
VPS45-205ENST00000462852 PROSER2Q86WR7 435 aaPredicted RBP11.88□□□□□ -0.51
VPS45-205ENST00000462852 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
VPS45-205ENST00000462852 NKTRP30414 1462 aaKnown RBP11.88□□□□□ -0.51
VPS45-205ENST00000462852 KIF7Q2M1P5 1343 aa11.87□□□□□ -0.51
VPS45-205ENST00000462852 USP32Q8NFA0 1604 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms