RNA–Protein interactions for RNA: ENST00000462171.1

TMCO4-203, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 3

Gene TMCO4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-203ENST00000462171 AAMPQ13685 434 aa12.88□□□□□ -0.35
TMCO4-203ENST00000462171 NFE2L2Q16236 605 aa12.88□□□□□ -0.35
TMCO4-203ENST00000462171 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
TMCO4-203ENST00000462171 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
TMCO4-203ENST00000462171 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
TMCO4-203ENST00000462171 EMILIN1Q9Y6C2 1016 aa12.88□□□□□ -0.35
TMCO4-203ENST00000462171 NRKQ7Z2Y5 1582 aa12.88□□□□□ -0.35
TMCO4-203ENST00000462171 RRS1Q15050 365 aaKnown RBP12.87□□□□□ -0.35
TMCO4-203ENST00000462171 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
TMCO4-203ENST00000462171 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
TMCO4-203ENST00000462171 C1orf167Q5SNV9 1468 aa12.86□□□□□ -0.35
TMCO4-203ENST00000462171 RTL1A6NKG5 1358 aa12.86□□□□□ -0.35
TMCO4-203ENST00000462171 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
TMCO4-203ENST00000462171 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
TMCO4-203ENST00000462171 PRKAR2BP31323 418 aa12.86□□□□□ -0.35
TMCO4-203ENST00000462171 CCDC136Q96JN2 1154 aa12.86□□□□□ -0.35
TMCO4-203ENST00000462171 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
TMCO4-203ENST00000462171 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
TMCO4-203ENST00000462171 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
TMCO4-203ENST00000462171 ROBO1Q9Y6N7 1651 aa12.85□□□□□ -0.35
TMCO4-203ENST00000462171 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
TMCO4-203ENST00000462171 ARHGEF10O15013 1369 aa12.84□□□□□ -0.35
TMCO4-203ENST00000462171 GNAI1P63096 354 aa12.84□□□□□ -0.35
TMCO4-203ENST00000462171 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
TMCO4-203ENST00000462171 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
TMCO4-203ENST00000462171 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
TMCO4-203ENST00000462171 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.36
TMCO4-203ENST00000462171 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
TMCO4-203ENST00000462171 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
TMCO4-203ENST00000462171 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.36
TMCO4-203ENST00000462171 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
TMCO4-203ENST00000462171 FOXO3O43524 673 aa12.82□□□□□ -0.36
TMCO4-203ENST00000462171 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
TMCO4-203ENST00000462171 HMOX1P09601 288 aa12.82□□□□□ -0.36
TMCO4-203ENST00000462171 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
TMCO4-203ENST00000462171 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
TMCO4-203ENST00000462171 RTF1Q92541 710 aaKnown RBP12.82□□□□□ -0.36
TMCO4-203ENST00000462171 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
TMCO4-203ENST00000462171 USP54Q70EL1 1684 aa12.82□□□□□ -0.36
TMCO4-203ENST00000462171 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
TMCO4-203ENST00000462171 SOX12O15370 315 aa12.81□□□□□ -0.36
TMCO4-203ENST00000462171 IP6K1Q92551 441 aa12.81□□□□□ -0.36
TMCO4-203ENST00000462171 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
TMCO4-203ENST00000462171 XPCQ01831 940 aaPredicted RBP12.8□□□□□ -0.36
TMCO4-203ENST00000462171 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
TMCO4-203ENST00000462171 LMOD2Q6P5Q4 547 aa12.8□□□□□ -0.36
TMCO4-203ENST00000462171 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
TMCO4-203ENST00000462171 HOXC9P31274 260 aa12.79□□□□□ -0.36
TMCO4-203ENST00000462171 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
TMCO4-203ENST00000462171 JCADQ9P266 1359 aa12.79□□□□□ -0.36
TMCO4-203ENST00000462171 FBLN1P23142 703 aa12.78□□□□□ -0.36
TMCO4-203ENST00000462171 ALDH1L2Q3SY69 923 aa12.78□□□□□ -0.36
TMCO4-203ENST00000462171 PIK3C2AO00443 1686 aa12.77□□□□□ -0.36
TMCO4-203ENST00000462171 GCP02774 474 aa12.77□□□□□ -0.37
TMCO4-203ENST00000462171 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
TMCO4-203ENST00000462171 NUTM2BA6NNL0 878 aaPredicted RBP12.76□□□□□ -0.37
TMCO4-203ENST00000462171 NUTM2EB1AL46 878 aaPredicted RBP12.76□□□□□ -0.37
TMCO4-203ENST00000462171 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
TMCO4-203ENST00000462171 NUTM2GQ5VZR2 741 aa12.76□□□□□ -0.37
TMCO4-203ENST00000462171 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
TMCO4-203ENST00000462171 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
TMCO4-203ENST00000462171 SOS2Q07890 1332 aaPredicted RBP12.76□□□□□ -0.37
TMCO4-203ENST00000462171 IGSF1Q8N6C5 1336 aa12.76□□□□□ -0.37
TMCO4-203ENST00000462171 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
TMCO4-203ENST00000462171 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
TMCO4-203ENST00000462171 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
TMCO4-203ENST00000462171 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
TMCO4-203ENST00000462171 KIF16BQ96L93 1317 aa12.75□□□□□ -0.37
TMCO4-203ENST00000462171 KDRP35968 1356 aa12.74□□□□□ -0.37
TMCO4-203ENST00000462171 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
TMCO4-203ENST00000462171 ZKSCAN2Q63HK3 967 aa12.74□□□□□ -0.37
TMCO4-203ENST00000462171 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
TMCO4-203ENST00000462171 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
TMCO4-203ENST00000462171 EYA1Q99502 592 aa12.74□□□□□ -0.37
TMCO4-203ENST00000462171 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
TMCO4-203ENST00000462171 LAS1LQ9Y4W2 734 aaKnown RBP12.74□□□□□ -0.37
TMCO4-203ENST00000462171 USP19O94966 1318 aa12.73□□□□□ -0.37
TMCO4-203ENST00000462171 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
TMCO4-203ENST00000462171 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
TMCO4-203ENST00000462171 PLEKHO1Q53GL0 409 aaPredicted RBP12.73□□□□□ -0.37
TMCO4-203ENST00000462171 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
TMCO4-203ENST00000462171 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
TMCO4-203ENST00000462171 ARHGEF25Q86VW2 580 aa12.73□□□□□ -0.37
TMCO4-203ENST00000462171 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
TMCO4-203ENST00000462171 SMC4Q9NTJ3 1288 aa12.73□□□□□ -0.37
TMCO4-203ENST00000462171 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
TMCO4-203ENST00000462171 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
TMCO4-203ENST00000462171 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
TMCO4-203ENST00000462171 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
TMCO4-203ENST00000462171 PLEKHG2Q9H7P9 1386 aa12.71□□□□□ -0.37
TMCO4-203ENST00000462171 PLIN1O60240 522 aa12.71□□□□□ -0.37
TMCO4-203ENST00000462171 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
TMCO4-203ENST00000462171 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
TMCO4-203ENST00000462171 LTV1Q96GA3 475 aaPredicted RBP12.71□□□□□ -0.37
TMCO4-203ENST00000462171 CRBNQ96SW2 442 aa12.71□□□□□ -0.37
TMCO4-203ENST00000462171 MED1Q15648 1581 aaPredicted RBP12.7□□□□□ -0.38
TMCO4-203ENST00000462171 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
TMCO4-203ENST00000462171 BCAR3O75815 825 aa12.7□□□□□ -0.38
TMCO4-203ENST00000462171 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
TMCO4-203ENST00000462171 SLIT3O75094 1523 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms