RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.17
COL4A6-204ENST00000461897 C1orf167Q5SNV9 1468 aa16.08■□□□□ 0.16
COL4A6-204ENST00000461897 CCDC27Q2M243 656 aa16.08■□□□□ 0.16
COL4A6-204ENST00000461897 RSPH6AQ9H0K4 717 aa16.08■□□□□ 0.16
COL4A6-204ENST00000461897 C19orf44Q9H6X5 657 aa16.08■□□□□ 0.16
COL4A6-204ENST00000461897 ORAI2Q96SN7 254 aa16.07■□□□□ 0.16
COL4A6-204ENST00000461897 NCOA3Q9Y6Q9 1424 aa16.07■□□□□ 0.16
COL4A6-204ENST00000461897 XIRP1Q702N8 1843 aaKnown RBP16.07■□□□□ 0.16
COL4A6-204ENST00000461897 DCCP43146 1447 aa16.06■□□□□ 0.16
COL4A6-204ENST00000461897 E9PSI1 815 aa16.06■□□□□ 0.16
COL4A6-204ENST00000461897 SOX12O15370 315 aa16.06■□□□□ 0.16
COL4A6-204ENST00000461897 FCHSD2O94868 740 aa16.06■□□□□ 0.16
COL4A6-204ENST00000461897 KIF1AQ12756 1690 aa16.06■□□□□ 0.16
COL4A6-204ENST00000461897 RGPD1P0DJD0 1748 aa16.06■□□□□ 0.16
COL4A6-204ENST00000461897 MAPK8IP3Q9UPT6 1336 aa16.06■□□□□ 0.16
COL4A6-204ENST00000461897 NLRP6P59044 892 aa16.05■□□□□ 0.16
COL4A6-204ENST00000461897 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
COL4A6-204ENST00000461897 MAP3K19Q56UN5 1328 aa16.05■□□□□ 0.16
COL4A6-204ENST00000461897 MST1RQ04912 1400 aa16.05■□□□□ 0.16
COL4A6-204ENST00000461897 TMPOP42166 694 aaKnown RBP16.05■□□□□ 0.16
COL4A6-204ENST00000461897 TRPM3Q9HCF6 1732 aaPredicted RBP16.04■□□□□ 0.16
COL4A6-204ENST00000461897 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
COL4A6-204ENST00000461897 NUTM2GQ5VZR2 741 aa16.04■□□□□ 0.16
COL4A6-204ENST00000461897 ABTB2Q8N961 1025 aa16.04■□□□□ 0.16
COL4A6-204ENST00000461897 HMOX1P09601 288 aa16.03■□□□□ 0.16
COL4A6-204ENST00000461897 EIF4A2Q14240 407 aaKnown RBP16.03■□□□□ 0.16
COL4A6-204ENST00000461897 PNNQ9H307 717 aaKnown RBP16.03■□□□□ 0.16
COL4A6-204ENST00000461897 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
COL4A6-204ENST00000461897 HSP90AB2PQ58FF8 381 aa16.03■□□□□ 0.16
COL4A6-204ENST00000461897 WDR63Q8IWG1 891 aa16.03■□□□□ 0.16
COL4A6-204ENST00000461897 FLT4P35916 1363 aa16.02■□□□□ 0.16
COL4A6-204ENST00000461897 PSME1Q06323 249 aa16.02■□□□□ 0.16
COL4A6-204ENST00000461897 FAM161AQ3B820 660 aa16.02■□□□□ 0.16
COL4A6-204ENST00000461897 TRIM35Q9UPQ4 493 aa16.02■□□□□ 0.16
COL4A6-204ENST00000461897 NFAT5O94916 1531 aa16.01■□□□□ 0.15
COL4A6-204ENST00000461897 FOXO3O43524 673 aa16.01■□□□□ 0.15
COL4A6-204ENST00000461897 C8orf34Q49A92 452 aa16.01■□□□□ 0.15
COL4A6-204ENST00000461897 LTN1O94822 1766 aa16.01■□□□□ 0.15
COL4A6-204ENST00000461897 ATF3P18847 181 aa16■□□□□ 0.15
COL4A6-204ENST00000461897 PDE3AQ14432 1141 aa16■□□□□ 0.15
COL4A6-204ENST00000461897 PHACTR3Q96KR7 559 aa16■□□□□ 0.15
COL4A6-204ENST00000461897 RIPK4P57078 832 aa15.99■□□□□ 0.15
COL4A6-204ENST00000461897 XPCQ01831 940 aaPredicted RBP15.99■□□□□ 0.15
COL4A6-204ENST00000461897 SKAP1Q86WV1 359 aa15.99■□□□□ 0.15
COL4A6-204ENST00000461897 KIF24Q5T7B8 1368 aa15.98■□□□□ 0.15
COL4A6-204ENST00000461897 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
COL4A6-204ENST00000461897 AEBP1Q8IUX7 1158 aa15.98■□□□□ 0.15
COL4A6-204ENST00000461897 ZNF335Q9H4Z2 1342 aaPredicted RBP15.98■□□□□ 0.15
COL4A6-204ENST00000461897 MSH6P52701 1360 aa15.98■□□□□ 0.15
COL4A6-204ENST00000461897 ALS2Q96Q42 1657 aa15.97■□□□□ 0.15
COL4A6-204ENST00000461897 SLIT3O75094 1523 aa15.97■□□□□ 0.15
COL4A6-204ENST00000461897 VIRMAQ69YN4 1812 aaKnown RBP15.97■□□□□ 0.15
COL4A6-204ENST00000461897 AMPHP49418 695 aa15.97■□□□□ 0.15
COL4A6-204ENST00000461897 NFE2L2Q16236 605 aa15.97■□□□□ 0.15
COL4A6-204ENST00000461897 CADPS2Q86UW7 1296 aa15.97■□□□□ 0.15
COL4A6-204ENST00000461897 PHRF1Q9P1Y6 1649 aaKnown RBP15.96■□□□□ 0.15
COL4A6-204ENST00000461897 NEFMP07197 916 aa15.96■□□□□ 0.15
COL4A6-204ENST00000461897 HOXC9P31274 260 aa15.96■□□□□ 0.15
COL4A6-204ENST00000461897 ARHGEF10O15013 1369 aa15.96■□□□□ 0.15
COL4A6-204ENST00000461897 RTL1A6NKG5 1358 aa15.95■□□□□ 0.14
COL4A6-204ENST00000461897 AAMPQ13685 434 aa15.95■□□□□ 0.14
COL4A6-204ENST00000461897 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
COL4A6-204ENST00000461897 KRT28Q7Z3Y7 464 aa15.95■□□□□ 0.14
COL4A6-204ENST00000461897 IL16Q14005 1332 aa15.94■□□□□ 0.14
COL4A6-204ENST00000461897 BCAR3O75815 825 aa15.94■□□□□ 0.14
COL4A6-204ENST00000461897 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
COL4A6-204ENST00000461897 KDRP35968 1356 aa15.93■□□□□ 0.14
COL4A6-204ENST00000461897 IGSF1Q8N6C5 1336 aa15.93■□□□□ 0.14
COL4A6-204ENST00000461897 LAS1LQ9Y4W2 734 aaKnown RBP15.93■□□□□ 0.14
COL4A6-204ENST00000461897 USP19O94966 1318 aa15.93■□□□□ 0.14
COL4A6-204ENST00000461897 KCNH5Q8NCM2 988 aa15.92■□□□□ 0.14
COL4A6-204ENST00000461897 DDX17Q92841 729 aaKnown RBP15.92■□□□□ 0.14
COL4A6-204ENST00000461897 TSR2Q969E8 191 aaKnown RBP15.92■□□□□ 0.14
COL4A6-204ENST00000461897 PXDNQ92626 1479 aa15.91■□□□□ 0.14
COL4A6-204ENST00000461897 MED1Q15648 1581 aaPredicted RBP15.91■□□□□ 0.14
COL4A6-204ENST00000461897 EYA1Q99502 592 aa15.91■□□□□ 0.14
COL4A6-204ENST00000461897 GCP02774 474 aa15.89■□□□□ 0.13
COL4A6-204ENST00000461897 LMOD2Q6P5Q4 547 aa15.89■□□□□ 0.13
COL4A6-204ENST00000461897 IP6K1Q92551 441 aa15.89■□□□□ 0.13
COL4A6-204ENST00000461897 CLUAP1Q96AJ1 413 aa15.89■□□□□ 0.13
COL4A6-204ENST00000461897 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
COL4A6-204ENST00000461897 NPHP3Q7Z494 1330 aa15.89■□□□□ 0.13
COL4A6-204ENST00000461897 TNS3Q68CZ2 1445 aa15.87■□□□□ 0.13
COL4A6-204ENST00000461897 CRYBG1Q9Y4K1 1723 aa15.87■□□□□ 0.13
COL4A6-204ENST00000461897 IGHDP01880 384 aa15.87■□□□□ 0.13
COL4A6-204ENST00000461897 RARSP54136 660 aaKnown RBP15.87■□□□□ 0.13
COL4A6-204ENST00000461897 LMOD3Q0VAK6 560 aa15.87■□□□□ 0.13
COL4A6-204ENST00000461897 BRINP3Q76B58 766 aa15.87■□□□□ 0.13
COL4A6-204ENST00000461897 ARHGEF25Q86VW2 580 aa15.87■□□□□ 0.13
COL4A6-204ENST00000461897 RGPD2P0DJD1 1756 aa15.86■□□□□ 0.13
COL4A6-204ENST00000461897 FAM83GA6ND36 823 aa15.86■□□□□ 0.13
COL4A6-204ENST00000461897 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
COL4A6-204ENST00000461897 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
COL4A6-204ENST00000461897 LTV1Q96GA3 475 aaPredicted RBP15.86■□□□□ 0.13
COL4A6-204ENST00000461897 RGS3P49796 1198 aa15.85■□□□□ 0.13
COL4A6-204ENST00000461897 NFKBIBQ15653 356 aa15.85■□□□□ 0.13
COL4A6-204ENST00000461897 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
COL4A6-204ENST00000461897 CALD1Q05682 793 aaKnown RBP15.84■□□□□ 0.13
COL4A6-204ENST00000461897 DCTN1Q14203 1278 aa15.84■□□□□ 0.13
COL4A6-204ENST00000461897 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms