RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 THRAP3Q9Y2W1 955 aaKnown RBP12.99□□□□□ -0.33
BRCA1-207ENST00000461798 EP400Q96L91 3159 aa12.99□□□□□ -0.33
BRCA1-207ENST00000461798 SLIT3O75094 1523 aa12.98□□□□□ -0.33
BRCA1-207ENST00000461798 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
BRCA1-207ENST00000461798 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
BRCA1-207ENST00000461798 TCP11L2Q8N4U5 519 aa12.98□□□□□ -0.33
BRCA1-207ENST00000461798 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
BRCA1-207ENST00000461798 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-207ENST00000461798 THSD7AQ9UPZ6 1657 aa12.98□□□□□ -0.33
BRCA1-207ENST00000461798 LMO7Q8WWI1 1683 aa12.97□□□□□ -0.33
BRCA1-207ENST00000461798 ARHGEF25Q86VW2 580 aa12.97□□□□□ -0.33
BRCA1-207ENST00000461798 KTN1Q86UP2 1357 aaKnown RBP12.96□□□□□ -0.33
BRCA1-207ENST00000461798 BAG6P46379 1132 aa12.96□□□□□ -0.33
BRCA1-207ENST00000461798 FAM196AQ6ZSG2 479 aa12.96□□□□□ -0.33
BRCA1-207ENST00000461798 TESK2Q96S53 571 aa12.96□□□□□ -0.33
BRCA1-207ENST00000461798 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.34
BRCA1-207ENST00000461798 USP31Q70CQ4 1352 aa12.95□□□□□ -0.34
BRCA1-207ENST00000461798 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
BRCA1-207ENST00000461798 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
BRCA1-207ENST00000461798 USP35Q9P2H5 1018 aa12.95□□□□□ -0.34
BRCA1-207ENST00000461798 TIMELESSQ9UNS1 1208 aa12.95□□□□□ -0.34
BRCA1-207ENST00000461798 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
BRCA1-207ENST00000461798 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
BRCA1-207ENST00000461798 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
BRCA1-207ENST00000461798 AXIN2Q9Y2T1 843 aa12.94□□□□□ -0.34
BRCA1-207ENST00000461798 CRB1P82279 1406 aa12.94□□□□□ -0.34
BRCA1-207ENST00000461798 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
BRCA1-207ENST00000461798 HDGFL2Q7Z4V5 671 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-207ENST00000461798 TMC1Q8TDI8 760 aa12.93□□□□□ -0.34
BRCA1-207ENST00000461798 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
BRCA1-207ENST00000461798 DISP2A7MBM2 1401 aa12.93□□□□□ -0.34
BRCA1-207ENST00000461798 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
BRCA1-207ENST00000461798 C11orf95C9JLR9 678 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-207ENST00000461798 AKAP12Q02952 1782 aa12.92□□□□□ -0.34
BRCA1-207ENST00000461798 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
BRCA1-207ENST00000461798 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
BRCA1-207ENST00000461798 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-207ENST00000461798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.34
BRCA1-207ENST00000461798 COL18A1P39060 1754 aa12.91□□□□□ -0.34
BRCA1-207ENST00000461798 NINLQ9Y2I6 1382 aa12.91□□□□□ -0.34
BRCA1-207ENST00000461798 TOM1L2Q6ZVM7 507 aa12.9□□□□□ -0.34
BRCA1-207ENST00000461798 NME9Q86XW9 330 aa12.9□□□□□ -0.34
BRCA1-207ENST00000461798 CAMKK2Q96RR4 588 aa12.9□□□□□ -0.34
BRCA1-207ENST00000461798 CDCA7Q9BWT1 371 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-207ENST00000461798 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
BRCA1-207ENST00000461798 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-207ENST00000461798 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
BRCA1-207ENST00000461798 TRIM37O94972 964 aa12.89□□□□□ -0.35
BRCA1-207ENST00000461798 NFAT5O94916 1531 aa12.88□□□□□ -0.35
BRCA1-207ENST00000461798 SOX12O15370 315 aa12.88□□□□□ -0.35
BRCA1-207ENST00000461798 A0A1W2PP64 1363 aa12.88□□□□□ -0.35
BRCA1-207ENST00000461798 MON2Q7Z3U7 1717 aa12.88□□□□□ -0.35
BRCA1-207ENST00000461798 ABCC6O95255 1503 aa12.88□□□□□ -0.35
BRCA1-207ENST00000461798 PARD3Q8TEW0 1356 aa12.87□□□□□ -0.35
BRCA1-207ENST00000461798 APBA3O96018 575 aa12.87□□□□□ -0.35
BRCA1-207ENST00000461798 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
BRCA1-207ENST00000461798 DDB1Q16531 1140 aa12.87□□□□□ -0.35
BRCA1-207ENST00000461798 RGPD1P0DJD0 1748 aa12.86□□□□□ -0.35
BRCA1-207ENST00000461798 TMF1P82094 1093 aa12.86□□□□□ -0.35
BRCA1-207ENST00000461798 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
BRCA1-207ENST00000461798 USP47Q96K76 1375 aa12.85□□□□□ -0.35
BRCA1-207ENST00000461798 CCDC7Q96M83 1385 aa12.85□□□□□ -0.35
BRCA1-207ENST00000461798 CSB-PGBD3P0DP91 1061 aa12.85□□□□□ -0.35
BRCA1-207ENST00000461798 USP54Q70EL1 1684 aa12.85□□□□□ -0.35
BRCA1-207ENST00000461798 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
BRCA1-207ENST00000461798 BCL9O00512 1426 aa12.85□□□□□ -0.35
BRCA1-207ENST00000461798 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
BRCA1-207ENST00000461798 CDCA8Q53HL2 280 aa12.84□□□□□ -0.35
BRCA1-207ENST00000461798 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-207ENST00000461798 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
BRCA1-207ENST00000461798 ERBB3P21860 1342 aa12.84□□□□□ -0.35
BRCA1-207ENST00000461798 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.36
BRCA1-207ENST00000461798 EXOC5O00471 708 aa12.83□□□□□ -0.36
BRCA1-207ENST00000461798 IP6K1Q92551 441 aa12.83□□□□□ -0.36
BRCA1-207ENST00000461798 PCGF6Q9BYE7 350 aa12.83□□□□□ -0.36
BRCA1-207ENST00000461798 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
BRCA1-207ENST00000461798 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-207ENST00000461798 PLSCR1O15162 318 aa12.82□□□□□ -0.36
BRCA1-207ENST00000461798 COG3Q96JB2 828 aa12.82□□□□□ -0.36
BRCA1-207ENST00000461798 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-207ENST00000461798 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
BRCA1-207ENST00000461798 PEAK1Q9H792 1746 aa12.8□□□□□ -0.36
BRCA1-207ENST00000461798 SRCAPQ6ZRS2 3230 aa12.8□□□□□ -0.36
BRCA1-207ENST00000461798 FYB1O15117 783 aa12.8□□□□□ -0.36
BRCA1-207ENST00000461798 R3HDM1Q15032 1099 aaKnown RBP12.8□□□□□ -0.36
BRCA1-207ENST00000461798 NLRP2Q9NX02 1062 aa12.8□□□□□ -0.36
BRCA1-207ENST00000461798 IL2RBP14784 551 aa12.79□□□□□ -0.36
BRCA1-207ENST00000461798 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
BRCA1-207ENST00000461798 LRRC37A3O60309 1634 aa12.79□□□□□ -0.36
BRCA1-207ENST00000461798 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
BRCA1-207ENST00000461798 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
BRCA1-207ENST00000461798 RGPD5Q99666 1765 aa12.77□□□□□ -0.36
BRCA1-207ENST00000461798 LHX8Q68G74 356 aa12.77□□□□□ -0.37
BRCA1-207ENST00000461798 FBLN1P23142 703 aa12.76□□□□□ -0.37
BRCA1-207ENST00000461798 HOXC9P31274 260 aa12.76□□□□□ -0.37
BRCA1-207ENST00000461798 PROM2Q8N271 834 aa12.76□□□□□ -0.37
BRCA1-207ENST00000461798 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
BRCA1-207ENST00000461798 TNS2Q63HR2 1409 aa12.76□□□□□ -0.37
BRCA1-207ENST00000461798 LRP5O75197 1615 aa12.75□□□□□ -0.37
BRCA1-207ENST00000461798 AMPHP49418 695 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms