RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 SLIT3O75094 1523 aa19.98■□□□□ 0.79
PABPC4-208ENST00000461578 PROM2Q8N271 834 aa19.98■□□□□ 0.79
PABPC4-208ENST00000461578 MARCH10Q8NA82 808 aaPredicted RBP19.98■□□□□ 0.79
PABPC4-208ENST00000461578 CABP1Q9NZU7 370 aa19.98■□□□□ 0.79
PABPC4-208ENST00000461578 ATF5Q9Y2D1 282 aaPredicted RBP19.98■□□□□ 0.79
PABPC4-208ENST00000461578 USP6P35125 1406 aa19.98■□□□□ 0.79
PABPC4-208ENST00000461578 CENPJQ9HC77 1338 aaPredicted RBP19.98■□□□□ 0.79
PABPC4-208ENST00000461578 AKAP12Q02952 1782 aa19.98■□□□□ 0.79
PABPC4-208ENST00000461578 AXIN2Q9Y2T1 843 aa19.97■□□□□ 0.79
PABPC4-208ENST00000461578 COL18A1P39060 1754 aa19.96■□□□□ 0.79
PABPC4-208ENST00000461578 QRICH2Q9H0J4 1663 aa19.96■□□□□ 0.79
PABPC4-208ENST00000461578 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
PABPC4-208ENST00000461578 BRD4O60885 1362 aaPredicted RBP19.95■□□□□ 0.79
PABPC4-208ENST00000461578 PIK3C2AO00443 1686 aa19.95■□□□□ 0.78
PABPC4-208ENST00000461578 SOX12O15370 315 aa19.95■□□□□ 0.78
PABPC4-208ENST00000461578 CSB-PGBD3P0DP91 1061 aa19.94■□□□□ 0.78
PABPC4-208ENST00000461578 PTGER2P43116 358 aa19.94■□□□□ 0.78
PABPC4-208ENST00000461578 STK32BQ9NY57 414 aa19.94■□□□□ 0.78
PABPC4-208ENST00000461578 RGPD5Q99666 1765 aa19.93■□□□□ 0.78
PABPC4-208ENST00000461578 TXNRD1Q16881 649 aa19.93■□□□□ 0.78
PABPC4-208ENST00000461578 CPSF1Q10570 1443 aaKnown RBP19.93■□□□□ 0.78
PABPC4-208ENST00000461578 ZNF784Q8NCA9 323 aaPredicted RBP19.92■□□□□ 0.78
PABPC4-208ENST00000461578 CDCA7Q9BWT1 371 aaPredicted RBP19.91■□□□□ 0.78
PABPC4-208ENST00000461578 FHDC1Q9C0D6 1143 aaPredicted RBP19.91■□□□□ 0.78
PABPC4-208ENST00000461578 SLC15A2Q16348 729 aa19.9■□□□□ 0.78
PABPC4-208ENST00000461578 BCL9O00512 1426 aa19.89■□□□□ 0.77
PABPC4-208ENST00000461578 ARHGEF25Q86VW2 580 aa19.89■□□□□ 0.77
PABPC4-208ENST00000461578 SYT17Q9BSW7 474 aa19.89■□□□□ 0.77
PABPC4-208ENST00000461578 EXOC5O00471 708 aa19.88■□□□□ 0.77
PABPC4-208ENST00000461578 CARD10Q9BWT7 1032 aa19.88■□□□□ 0.77
PABPC4-208ENST00000461578 TTC21BQ7Z4L5 1316 aa19.86■□□□□ 0.77
PABPC4-208ENST00000461578 KCNH5Q8NCM2 988 aa19.86■□□□□ 0.77
PABPC4-208ENST00000461578 ACSBG1Q96GR2 724 aa19.86■□□□□ 0.77
PABPC4-208ENST00000461578 MTFR1LQ9H019 292 aa19.86■□□□□ 0.77
PABPC4-208ENST00000461578 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
PABPC4-208ENST00000461578 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
PABPC4-208ENST00000461578 SGIP1Q9BQI5 828 aa19.83■□□□□ 0.77
PABPC4-208ENST00000461578 TNS2Q63HR2 1409 aa19.83■□□□□ 0.76
PABPC4-208ENST00000461578 TRPM1Q7Z4N2 1603 aa19.83■□□□□ 0.76
PABPC4-208ENST00000461578 CHD4Q14839 1912 aa19.82■□□□□ 0.76
PABPC4-208ENST00000461578 NHSQ6T4R5 1651 aa19.82■□□□□ 0.76
PABPC4-208ENST00000461578 CCDC7Q96M83 1385 aa19.82■□□□□ 0.76
PABPC4-208ENST00000461578 UTRNP46939 3433 aa19.82■□□□□ 0.76
PABPC4-208ENST00000461578 NFAT5O94916 1531 aa19.81■□□□□ 0.76
PABPC4-208ENST00000461578 ARXQ96QS3 562 aa19.81■□□□□ 0.76
PABPC4-208ENST00000461578 ZNF692Q9BU19 519 aaPredicted RBP19.8■□□□□ 0.76
PABPC4-208ENST00000461578 TTC21AQ8NDW8 1320 aa19.79■□□□□ 0.76
PABPC4-208ENST00000461578 PAPPAQ13219 1627 aa19.78■□□□□ 0.76
PABPC4-208ENST00000461578 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
PABPC4-208ENST00000461578 C1QTNF8P60827 252 aa19.77■□□□□ 0.76
PABPC4-208ENST00000461578 ZNF827Q17R98 1081 aa19.77■□□□□ 0.76
PABPC4-208ENST00000461578 KLHL34Q8N239 644 aa19.77■□□□□ 0.76
PABPC4-208ENST00000461578 KTN1Q86UP2 1357 aaKnown RBP19.77■□□□□ 0.76
PABPC4-208ENST00000461578 KAT6BQ8WYB5 2073 aa19.77■□□□□ 0.75
PABPC4-208ENST00000461578 ABCC6O95255 1503 aa19.76■□□□□ 0.75
PABPC4-208ENST00000461578 BTAF1O14981 1849 aa19.76■□□□□ 0.75
PABPC4-208ENST00000461578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.76■□□□□ 0.75
PABPC4-208ENST00000461578 GPR162Q16538 588 aa19.75■□□□□ 0.75
PABPC4-208ENST00000461578 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
PABPC4-208ENST00000461578 IL2RBP14784 551 aa19.74■□□□□ 0.75
PABPC4-208ENST00000461578 ERBB3P21860 1342 aa19.74■□□□□ 0.75
PABPC4-208ENST00000461578 PELP1Q8IZL8 1130 aaKnown RBP19.73■□□□□ 0.75
PABPC4-208ENST00000461578 LRRC4BQ9NT99 713 aa19.73■□□□□ 0.75
PABPC4-208ENST00000461578 LTN1O94822 1766 aa19.72■□□□□ 0.75
PABPC4-208ENST00000461578 MON2Q7Z3U7 1717 aa19.72■□□□□ 0.75
PABPC4-208ENST00000461578 ROCK2O75116 1388 aaKnown RBP19.71■□□□□ 0.75
PABPC4-208ENST00000461578 MAP3K5Q99683 1374 aa19.71■□□□□ 0.75
PABPC4-208ENST00000461578 NME9Q86XW9 330 aa19.71■□□□□ 0.75
PABPC4-208ENST00000461578 ANKRD24Q8TF21 1146 aa19.7■□□□□ 0.74
PABPC4-208ENST00000461578 USP31Q70CQ4 1352 aa19.68■□□□□ 0.74
PABPC4-208ENST00000461578 POLD1P28340 1107 aa19.67■□□□□ 0.74
PABPC4-208ENST00000461578 KCNQ4P56696 695 aa19.67■□□□□ 0.74
PABPC4-208ENST00000461578 DDX54Q8TDD1 881 aaKnown RBP19.67■□□□□ 0.74
PABPC4-208ENST00000461578 AKT1S1Q96B36 256 aa19.67■□□□□ 0.74
PABPC4-208ENST00000461578 USP54Q70EL1 1684 aa19.66■□□□□ 0.74
PABPC4-208ENST00000461578 GIGYF1O75420 1035 aaPredicted RBP19.66■□□□□ 0.74
PABPC4-208ENST00000461578 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
PABPC4-208ENST00000461578 TMC1Q8TDI8 760 aa19.65■□□□□ 0.74
PABPC4-208ENST00000461578 PNPLA7Q6ZV29 1317 aa19.65■□□□□ 0.74
PABPC4-208ENST00000461578 TUBGCP6Q96RT7 1819 aa19.65■□□□□ 0.74
PABPC4-208ENST00000461578 NLGN2Q8NFZ4 835 aa19.64■□□□□ 0.73
PABPC4-208ENST00000461578 SLC16A10Q8TF71 515 aa19.64■□□□□ 0.73
PABPC4-208ENST00000461578 SYTL4Q96C24 671 aaPredicted RBP19.64■□□□□ 0.73
PABPC4-208ENST00000461578 LTV1Q96GA3 475 aaPredicted RBP19.64■□□□□ 0.73
PABPC4-208ENST00000461578 TFCP2L1Q9NZI6 479 aa19.64■□□□□ 0.73
PABPC4-208ENST00000461578 SBNO2Q9Y2G9 1366 aa19.64■□□□□ 0.73
PABPC4-208ENST00000461578 CD163L1Q9NR16 1453 aa19.64■□□□□ 0.73
PABPC4-208ENST00000461578 QSER1Q2KHR3 1735 aa19.64■□□□□ 0.73
PABPC4-208ENST00000461578 NEUROD1Q13562 356 aa19.63■□□□□ 0.73
PABPC4-208ENST00000461578 SLC27A3Q5K4L6 730 aa19.63■□□□□ 0.73
PABPC4-208ENST00000461578 HDGFL2Q7Z4V5 671 aaPredicted RBP19.61■□□□□ 0.73
PABPC4-208ENST00000461578 COL24A1Q17RW2 1714 aa19.6■□□□□ 0.73
PABPC4-208ENST00000461578 SLC12A5Q9H2X9 1139 aa19.6■□□□□ 0.73
PABPC4-208ENST00000461578 DOT1LQ8TEK3 1739 aa19.59■□□□□ 0.73
PABPC4-208ENST00000461578 SHANK3Q9BYB0 1731 aa19.59■□□□□ 0.73
PABPC4-208ENST00000461578 PRIM1P49642 420 aaKnown RBP19.59■□□□□ 0.73
PABPC4-208ENST00000461578 MSH5O43196 834 aa19.58■□□□□ 0.72
PABPC4-208ENST00000461578 GOLGB1Q14789 3259 aaKnown RBP19.58■□□□□ 0.72
PABPC4-208ENST00000461578 EDC4Q6P2E9 1401 aaKnown RBP19.58■□□□□ 0.72
PABPC4-208ENST00000461578 YBX3P16989 372 aaKnown RBP eCLIP19.57■□□□□ 0.724e-31■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms