RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 KIAA1210Q9ULL0 1709 aa17.38■□□□□ 0.37
HCFC1-204ENST00000461098 ZBTB7AO95365 584 aa17.37■□□□□ 0.37
HCFC1-204ENST00000461098 ZNF784Q8NCA9 323 aaPredicted RBP17.37■□□□□ 0.37
HCFC1-204ENST00000461098 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
HCFC1-204ENST00000461098 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
HCFC1-204ENST00000461098 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
HCFC1-204ENST00000461098 USP6P35125 1406 aa17.35■□□□□ 0.37
HCFC1-204ENST00000461098 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
HCFC1-204ENST00000461098 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
HCFC1-204ENST00000461098 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
HCFC1-204ENST00000461098 SGIP1Q9BQI5 828 aa17.34■□□□□ 0.37
HCFC1-204ENST00000461098 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
HCFC1-204ENST00000461098 AKAP12Q02952 1782 aa17.33■□□□□ 0.37
HCFC1-204ENST00000461098 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.36
HCFC1-204ENST00000461098 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.36
HCFC1-204ENST00000461098 NLRP6P59044 892 aa17.33■□□□□ 0.36
HCFC1-204ENST00000461098 SRPK2P78362 688 aaKnown RBP17.33■□□□□ 0.36
HCFC1-204ENST00000461098 SYT17Q9BSW7 474 aa17.33■□□□□ 0.36
HCFC1-204ENST00000461098 TXNRD1Q16881 649 aa17.32■□□□□ 0.36
HCFC1-204ENST00000461098 FHDC1Q9C0D6 1143 aaPredicted RBP17.32■□□□□ 0.36
HCFC1-204ENST00000461098 CABP1Q9NZU7 370 aa17.32■□□□□ 0.36
HCFC1-204ENST00000461098 RGPD5Q99666 1765 aa17.32■□□□□ 0.36
HCFC1-204ENST00000461098 SLC15A2Q16348 729 aa17.31■□□□□ 0.36
HCFC1-204ENST00000461098 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
HCFC1-204ENST00000461098 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
HCFC1-204ENST00000461098 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
HCFC1-204ENST00000461098 CDCA7Q9BWT1 371 aaPredicted RBP17.29■□□□□ 0.36
HCFC1-204ENST00000461098 CARD10Q9BWT7 1032 aa17.28■□□□□ 0.36
HCFC1-204ENST00000461098 STK32BQ9NY57 414 aa17.28■□□□□ 0.36
HCFC1-204ENST00000461098 QRICH2Q9H0J4 1663 aa17.28■□□□□ 0.36
HCFC1-204ENST00000461098 CHD4Q14839 1912 aa17.27■□□□□ 0.36
HCFC1-204ENST00000461098 MTFR1LQ9H019 292 aa17.27■□□□□ 0.36
HCFC1-204ENST00000461098 PAPPAQ13219 1627 aa17.26■□□□□ 0.35
HCFC1-204ENST00000461098 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
HCFC1-204ENST00000461098 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
HCFC1-204ENST00000461098 NHSQ6T4R5 1651 aa17.24■□□□□ 0.35
HCFC1-204ENST00000461098 EXOC5O00471 708 aa17.24■□□□□ 0.35
HCFC1-204ENST00000461098 C1QTNF8P60827 252 aa17.24■□□□□ 0.35
HCFC1-204ENST00000461098 NFAT5O94916 1531 aa17.24■□□□□ 0.35
HCFC1-204ENST00000461098 TTC21BQ7Z4L5 1316 aa17.23■□□□□ 0.35
HCFC1-204ENST00000461098 MAP3K5Q99683 1374 aa17.23■□□□□ 0.35
HCFC1-204ENST00000461098 TNS2Q63HR2 1409 aa17.22■□□□□ 0.35
HCFC1-204ENST00000461098 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
HCFC1-204ENST00000461098 ARXQ96QS3 562 aa17.22■□□□□ 0.35
HCFC1-204ENST00000461098 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
HCFC1-204ENST00000461098 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
HCFC1-204ENST00000461098 SOX12O15370 315 aa17.2■□□□□ 0.34
HCFC1-204ENST00000461098 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
HCFC1-204ENST00000461098 ABCC6O95255 1503 aa17.2■□□□□ 0.34
HCFC1-204ENST00000461098 ZNF827Q17R98 1081 aa17.19■□□□□ 0.34
HCFC1-204ENST00000461098 ACSBG1Q96GR2 724 aa17.19■□□□□ 0.34
HCFC1-204ENST00000461098 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
HCFC1-204ENST00000461098 LRRC4BQ9NT99 713 aa17.19■□□□□ 0.34
HCFC1-204ENST00000461098 BTAF1O14981 1849 aa17.18■□□□□ 0.34
HCFC1-204ENST00000461098 COL24A1Q17RW2 1714 aa17.17■□□□□ 0.34
HCFC1-204ENST00000461098 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
HCFC1-204ENST00000461098 TTC21AQ8NDW8 1320 aa17.17■□□□□ 0.34
HCFC1-204ENST00000461098 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
HCFC1-204ENST00000461098 ERBB3P21860 1342 aa17.15■□□□□ 0.34
HCFC1-204ENST00000461098 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
HCFC1-204ENST00000461098 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
HCFC1-204ENST00000461098 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
HCFC1-204ENST00000461098 IL2RBP14784 551 aa17.12■□□□□ 0.33
HCFC1-204ENST00000461098 GPR162Q16538 588 aa17.12■□□□□ 0.33
HCFC1-204ENST00000461098 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
HCFC1-204ENST00000461098 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
HCFC1-204ENST00000461098 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
HCFC1-204ENST00000461098 LTN1O94822 1766 aa17.1■□□□□ 0.33
HCFC1-204ENST00000461098 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
HCFC1-204ENST00000461098 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
HCFC1-204ENST00000461098 SLC16A10Q8TF71 515 aa17.1■□□□□ 0.33
HCFC1-204ENST00000461098 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
HCFC1-204ENST00000461098 NLRP2Q9NX02 1062 aa17.1■□□□□ 0.33
HCFC1-204ENST00000461098 PNPLA7Q6ZV29 1317 aa17.1■□□□□ 0.33
HCFC1-204ENST00000461098 CD163L1Q9NR16 1453 aa17.1■□□□□ 0.33
HCFC1-204ENST00000461098 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.32
HCFC1-204ENST00000461098 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.32
HCFC1-204ENST00000461098 SBNO2Q9Y2G9 1366 aa17.07■□□□□ 0.32
HCFC1-204ENST00000461098 SLC27A3Q5K4L6 730 aa17.07■□□□□ 0.32
HCFC1-204ENST00000461098 NME9Q86XW9 330 aa17.07■□□□□ 0.32
HCFC1-204ENST00000461098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
HCFC1-204ENST00000461098 ANKRD24Q8TF21 1146 aa17.07■□□□□ 0.32
HCFC1-204ENST00000461098 KAT6BQ8WYB5 2073 aa17.07■□□□□ 0.32
HCFC1-204ENST00000461098 KCNQ4P56696 695 aa17.06■□□□□ 0.32
HCFC1-204ENST00000461098 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
HCFC1-204ENST00000461098 POLD1P28340 1107 aa17.04■□□□□ 0.32
HCFC1-204ENST00000461098 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
HCFC1-204ENST00000461098 LY75O60449 1722 aa17.04■□□□□ 0.32
HCFC1-204ENST00000461098 NSD2O96028 1365 aa17.03■□□□□ 0.32
HCFC1-204ENST00000461098 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.32
HCFC1-204ENST00000461098 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
HCFC1-204ENST00000461098 DDX54Q8TDD1 881 aaKnown RBP17.02■□□□□ 0.32
HCFC1-204ENST00000461098 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
HCFC1-204ENST00000461098 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
HCFC1-204ENST00000461098 DOT1LQ8TEK3 1739 aa17■□□□□ 0.31
HCFC1-204ENST00000461098 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
HCFC1-204ENST00000461098 IP6K1Q92551 441 aa16.99■□□□□ 0.31
HCFC1-204ENST00000461098 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
HCFC1-204ENST00000461098 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
HCFC1-204ENST00000461098 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms