RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
LMNB1-203ENST00000460265 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-203ENST00000460265 NEXMIFQ5QGS0 1516 aa19.22■□□□□ 0.67
LMNB1-203ENST00000460265 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
LMNB1-203ENST00000460265 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
LMNB1-203ENST00000460265 MYOM1P52179 1685 aa19.21■□□□□ 0.67
LMNB1-203ENST00000460265 KIAA1210Q9ULL0 1709 aa19.21■□□□□ 0.67
LMNB1-203ENST00000460265 IL13P35225 146 aa19.21■□□□□ 0.67
LMNB1-203ENST00000460265 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-203ENST00000460265 TTC21BQ7Z4L5 1316 aa19.21■□□□□ 0.67
LMNB1-203ENST00000460265 SETBP1Q9Y6X0 1596 aa19.21■□□□□ 0.67
LMNB1-203ENST00000460265 XPCQ01831 940 aaPredicted RBP19.2■□□□□ 0.66
LMNB1-203ENST00000460265 EIF4A2Q14240 407 aaKnown RBP19.2■□□□□ 0.66
LMNB1-203ENST00000460265 FOXO3O43524 673 aa19.2■□□□□ 0.66
LMNB1-203ENST00000460265 VAMP4O75379 141 aa19.19■□□□□ 0.66
LMNB1-203ENST00000460265 AAMPQ13685 434 aa19.19■□□□□ 0.66
LMNB1-203ENST00000460265 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
LMNB1-203ENST00000460265 C22orf23Q9BZE7 217 aa19.19■□□□□ 0.66
LMNB1-203ENST00000460265 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
LMNB1-203ENST00000460265 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
LMNB1-203ENST00000460265 GZF1Q9H116 711 aaPredicted RBP19.18■□□□□ 0.66
LMNB1-203ENST00000460265 USHBP1Q8N6Y0 703 aa19.17■□□□□ 0.66
LMNB1-203ENST00000460265 PRR36Q9H6K5 1346 aa19.17■□□□□ 0.66
LMNB1-203ENST00000460265 STK31Q9BXU1 1019 aa19.17■□□□□ 0.66
LMNB1-203ENST00000460265 PPLO60437 1756 aa19.17■□□□□ 0.66
LMNB1-203ENST00000460265 PIK3C2BO00750 1634 aa19.17■□□□□ 0.66
LMNB1-203ENST00000460265 GOLGA6L3A6NEY3 463 aa19.17■□□□□ 0.66
LMNB1-203ENST00000460265 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
LMNB1-203ENST00000460265 EIF2S2P20042 333 aaKnown RBP19.16■□□□□ 0.66
LMNB1-203ENST00000460265 CLCN1P35523 988 aa19.16■□□□□ 0.66
LMNB1-203ENST00000460265 HSCBQ8IWL3 235 aa19.16■□□□□ 0.66
LMNB1-203ENST00000460265 IFT57Q9NWB7 429 aa19.16■□□□□ 0.66
LMNB1-203ENST00000460265 PSME1Q06323 249 aa19.16■□□□□ 0.66
LMNB1-203ENST00000460265 A2ML1A8K2U0 1454 aa19.16■□□□□ 0.66
LMNB1-203ENST00000460265 HSP90AB1P08238 724 aaKnown RBP19.16■□□□□ 0.66
LMNB1-203ENST00000460265 ZFYVE9O95405 1425 aa19.16■□□□□ 0.66
LMNB1-203ENST00000460265 IL16Q14005 1332 aa19.15■□□□□ 0.66
LMNB1-203ENST00000460265 ESCO1Q5FWF5 840 aa19.15■□□□□ 0.66
LMNB1-203ENST00000460265 CHD1LQ86WJ1 897 aa19.15■□□□□ 0.66
LMNB1-203ENST00000460265 ZNF428Q96B54 188 aa19.15■□□□□ 0.66
LMNB1-203ENST00000460265 ALKQ9UM73 1620 aa19.15■□□□□ 0.66
LMNB1-203ENST00000460265 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
LMNB1-203ENST00000460265 PTPRMP28827 1452 aa19.14■□□□□ 0.66
LMNB1-203ENST00000460265 SIGLEC1Q9BZZ2 1709 aa19.14■□□□□ 0.65
LMNB1-203ENST00000460265 F6X3S4 739 aa19.14■□□□□ 0.65
LMNB1-203ENST00000460265 HAP1P54257 671 aaPredicted RBP19.14■□□□□ 0.65
LMNB1-203ENST00000460265 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.65
LMNB1-203ENST00000460265 FKBP5Q13451 457 aaPredicted RBP19.13■□□□□ 0.65
LMNB1-203ENST00000460265 ROBO2Q9HCK4 1378 aa19.13■□□□□ 0.65
LMNB1-203ENST00000460265 MRPL50Q8N5N7 158 aaKnown RBP19.12■□□□□ 0.65
LMNB1-203ENST00000460265 TMEM2Q9UHN6 1383 aa19.12■□□□□ 0.65
LMNB1-203ENST00000460265 KCNA6P17658 529 aa19.12■□□□□ 0.65
LMNB1-203ENST00000460265 XRCC6P12956 609 aaKnown RBP eCLIP19.11■□□□□ 0.65
LMNB1-203ENST00000460265 RBM10P98175 930 aaKnown RBP19.1■□□□□ 0.65
LMNB1-203ENST00000460265 PANK2Q9BZ23 570 aa19.09■□□□□ 0.65
LMNB1-203ENST00000460265 EDC4Q6P2E9 1401 aaKnown RBP19.09■□□□□ 0.65
LMNB1-203ENST00000460265 MAP3K19Q56UN5 1328 aa19.09■□□□□ 0.65
LMNB1-203ENST00000460265 MYO5BQ9ULV0 1848 aa19.08■□□□□ 0.65
LMNB1-203ENST00000460265 SMARCA5O60264 1052 aaPredicted RBP19.08■□□□□ 0.65
LMNB1-203ENST00000460265 HDAC1Q13547 482 aaPredicted RBP19.07■□□□□ 0.64
LMNB1-203ENST00000460265 MTHFSDQ2M296 383 aaKnown RBP19.07■□□□□ 0.64
LMNB1-203ENST00000460265 TRIM44Q96DX7 344 aaPredicted RBP19.07■□□□□ 0.64
LMNB1-203ENST00000460265 ZBTB7BO15156 539 aaPredicted RBP19.06■□□□□ 0.64
LMNB1-203ENST00000460265 TBC1D2Q9BYX2 928 aa19.06■□□□□ 0.64
LMNB1-203ENST00000460265 RIMBP3CA6NJZ7 1639 aa19.06■□□□□ 0.64
LMNB1-203ENST00000460265 RIMBP3BA6NNM3 1639 aa19.06■□□□□ 0.64
LMNB1-203ENST00000460265 RIMBP3Q9UFD9 1639 aa19.06■□□□□ 0.64
LMNB1-203ENST00000460265 NEURL4Q96JN8 1562 aa19.06■□□□□ 0.64
LMNB1-203ENST00000460265 ARHGEF40Q8TER5 1519 aa19.06■□□□□ 0.64
LMNB1-203ENST00000460265 CLTCQ00610 1675 aaKnown RBP19.05■□□□□ 0.64
LMNB1-203ENST00000460265 EYA1Q99502 592 aa19.05■□□□□ 0.64
LMNB1-203ENST00000460265 C16orf71Q8IYS4 520 aaPredicted RBP19.05■□□□□ 0.64
LMNB1-203ENST00000460265 PREX1Q8TCU6 1659 aa19.04■□□□□ 0.64
LMNB1-203ENST00000460265 GCC1Q96CN9 775 aa19.04■□□□□ 0.64
LMNB1-203ENST00000460265 TBC1D32Q96NH3 1257 aa19.04■□□□□ 0.64
LMNB1-203ENST00000460265 ZC3H13Q5T200 1668 aaKnown RBP19.04■□□□□ 0.64
LMNB1-203ENST00000460265 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
LMNB1-203ENST00000460265 ARHGEF28Q8N1W1 1705 aaKnown RBP19.03■□□□□ 0.64
LMNB1-203ENST00000460265 TMEM131LA2VDJ0 1609 aa19.03■□□□□ 0.64
LMNB1-203ENST00000460265 TRIM6-TRIM34B2RNG4 842 aa19.03■□□□□ 0.64
LMNB1-203ENST00000460265 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
LMNB1-203ENST00000460265 PDCL3Q9H2J4 239 aa19.03■□□□□ 0.64
LMNB1-203ENST00000460265 RICTORQ6R327 1708 aa19.03■□□□□ 0.64
LMNB1-203ENST00000460265 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
LMNB1-203ENST00000460265 GAS2L2Q8NHY3 880 aa19.03■□□□□ 0.64
LMNB1-203ENST00000460265 NUCB1Q02818 461 aa19.02■□□□□ 0.64
LMNB1-203ENST00000460265 TPRNQ4KMQ1 711 aa19.02■□□□□ 0.64
LMNB1-203ENST00000460265 CASC1Q6TDU7 716 aa19.02■□□□□ 0.64
LMNB1-203ENST00000460265 MEIS3Q99687 375 aa19.02■□□□□ 0.64
LMNB1-203ENST00000460265 TEFQ10587 303 aa19.02■□□□□ 0.64
LMNB1-203ENST00000460265 CD163L1Q9NR16 1453 aa19.02■□□□□ 0.64
LMNB1-203ENST00000460265 OS9Q13438 667 aaPredicted RBP19.02■□□□□ 0.63
LMNB1-203ENST00000460265 ESPNB1AK53 854 aa19.01■□□□□ 0.63
LMNB1-203ENST00000460265 HMMRO75330 724 aa19.01■□□□□ 0.63
LMNB1-203ENST00000460265 NOL8Q76FK4 1167 aaKnown RBP19.01■□□□□ 0.63
LMNB1-203ENST00000460265 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
LMNB1-203ENST00000460265 G2E3Q7L622 706 aa19.01■□□□□ 0.63
LMNB1-203ENST00000460265 RILPL2Q969X0 211 aa19.01■□□□□ 0.63
LMNB1-203ENST00000460265 PHF8Q9UPP1 1060 aa19■□□□□ 0.63
LMNB1-203ENST00000460265 PNPLA6Q8IY17 1366 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms