RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 GMPRP36959 345 aa6.73□□□□□ -1.33
VPS8-215ENST00000460158 MRPL14Q6P1L8 145 aaKnown RBP6.73□□□□□ -1.33
VPS8-215ENST00000460158 KLF16Q9BXK1 252 aaPredicted RBP6.73□□□□□ -1.33
VPS8-215ENST00000460158 GPR37L1O60883 481 aa6.72□□□□□ -1.33
VPS8-215ENST00000460158 ABL2P42684 1182 aa6.72□□□□□ -1.33
VPS8-215ENST00000460158 WDR4P57081 412 aaKnown RBP6.72□□□□□ -1.33
VPS8-215ENST00000460158 ZSCAN1Q8NBB4 408 aa6.72□□□□□ -1.33
VPS8-215ENST00000460158 NDUFB9Q9Y6M9 179 aa6.72□□□□□ -1.33
VPS8-215ENST00000460158 SUPT5HO00267 1087 aaKnown RBP6.71□□□□□ -1.34
VPS8-215ENST00000460158 PROSER2Q86WR7 435 aaPredicted RBP6.71□□□□□ -1.34
VPS8-215ENST00000460158 PRM3Q9NNZ6 103 aa6.71□□□□□ -1.34
VPS8-215ENST00000460158 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
VPS8-215ENST00000460158 VEGFBP49765 207 aa6.7□□□□□ -1.34
VPS8-215ENST00000460158 NR5A1Q13285 461 aa6.7□□□□□ -1.34
VPS8-215ENST00000460158 FNBP4Q8N3X1 1017 aaPredicted RBP6.7□□□□□ -1.34
VPS8-215ENST00000460158 PURBQ96QR8 312 aaKnown RBP6.7□□□□□ -1.34
VPS8-215ENST00000460158 TRAK2O60296 914 aa6.69□□□□□ -1.34
VPS8-215ENST00000460158 IRF5Q13568 498 aa6.69□□□□□ -1.34
VPS8-215ENST00000460158 BPHLQ86WA6 291 aaPredicted RBP6.69□□□□□ -1.34
VPS8-215ENST00000460158 FOXJ1Q92949 421 aa6.69□□□□□ -1.34
VPS8-215ENST00000460158 ERBB4Q15303 1308 aa6.69□□□□□ -1.34
VPS8-215ENST00000460158 ARMC2Q8NEN0 867 aa6.68□□□□□ -1.34
VPS8-215ENST00000460158 FKBPLQ9UIM3 349 aa6.68□□□□□ -1.34
VPS8-215ENST00000460158 ZIC2O95409 532 aaPredicted RBP6.67□□□□□ -1.34
VPS8-215ENST00000460158 VSIG8P0DPA2 414 aa6.67□□□□□ -1.34
VPS8-215ENST00000460158 ARID5BQ14865 1188 aa6.67□□□□□ -1.34
VPS8-215ENST00000460158 AGERQ15109 404 aa6.67□□□□□ -1.34
VPS8-215ENST00000460158 ARID3CA6NKF2 412 aa6.66□□□□□ -1.34
VPS8-215ENST00000460158 GRM5P41594 1212 aa6.66□□□□□ -1.34
VPS8-215ENST00000460158 C4orf48Q5BLP8 95 aa6.66□□□□□ -1.34
VPS8-215ENST00000460158 ITPKCQ96DU7 683 aa6.66□□□□□ -1.34
VPS8-215ENST00000460158 ZNF330Q9Y3S2 320 aaPredicted RBP6.66□□□□□ -1.34
VPS8-215ENST00000460158 UPP2O95045 317 aa6.65□□□□□ -1.34
VPS8-215ENST00000460158 NR3C2P08235 984 aa6.65□□□□□ -1.34
VPS8-215ENST00000460158 WWC1Q8IX03 1113 aa6.65□□□□□ -1.34
VPS8-215ENST00000460158 PNMA1Q8ND90 353 aa6.65□□□□□ -1.34
VPS8-215ENST00000460158 C1QTNF2Q9BXJ5 285 aa6.65□□□□□ -1.34
VPS8-215ENST00000460158 ZFAND3Q9H8U3 227 aa6.65□□□□□ -1.34
VPS8-215ENST00000460158 ZNF777Q9ULD5 760 aaPredicted RBP6.65□□□□□ -1.34
VPS8-215ENST00000460158 POM121CA8CG34 1229 aa6.64□□□□□ -1.35
VPS8-215ENST00000460158 MAN1A2O60476 641 aa6.64□□□□□ -1.35
VPS8-215ENST00000460158 VAC14Q08AM6 782 aa6.64□□□□□ -1.35
VPS8-215ENST00000460158 NBPF14Q5TI25 921 aa6.64□□□□□ -1.35
VPS8-215ENST00000460158 SH3RF1Q7Z6J0 888 aa6.64□□□□□ -1.35
VPS8-215ENST00000460158 C1orf115Q9H7X2 142 aa6.64□□□□□ -1.35
VPS8-215ENST00000460158 MAP4K5Q9Y4K4 846 aa6.64□□□□□ -1.35
VPS8-215ENST00000460158 SOBPA7XYQ1 873 aa6.63□□□□□ -1.35
VPS8-215ENST00000460158 WASHC4Q2M389 1173 aa6.63□□□□□ -1.35
VPS8-215ENST00000460158 TRMT44Q8IYL2 757 aaKnown RBP6.63□□□□□ -1.35
VPS8-215ENST00000460158 MEIOBQ8N635 442 aa6.63□□□□□ -1.35
VPS8-215ENST00000460158 ZC3H4Q9UPT8 1303 aaKnown RBP6.63□□□□□ -1.35
VPS8-215ENST00000460158 FBXO45P0C2W1 286 aa6.62□□□□□ -1.35
VPS8-215ENST00000460158 BMP2P12643 396 aa6.62□□□□□ -1.35
VPS8-215ENST00000460158 C6orf118Q5T5N4 469 aa6.62□□□□□ -1.35
VPS8-215ENST00000460158 PDXDC2PQ6P474 469 aa6.62□□□□□ -1.35
VPS8-215ENST00000460158 LINC00528Q8N1L1 170 aa6.62□□□□□ -1.35
VPS8-215ENST00000460158 GPKOWQ92917 476 aaPredicted RBP eCLIP6.62□□□□□ -1.35
VPS8-215ENST00000460158 OCSTAMPQ9BR26 566 aa6.62□□□□□ -1.35
VPS8-215ENST00000460158 ZBBXA8MT70 800 aa6.61□□□□□ -1.35
VPS8-215ENST00000460158 NR1H3Q13133 447 aa6.61□□□□□ -1.35
VPS8-215ENST00000460158 SH3BP5LQ7L8J4 393 aa6.61□□□□□ -1.35
VPS8-215ENST00000460158 TSEN34Q9BSV6 310 aaKnown RBP6.61□□□□□ -1.35
VPS8-215ENST00000460158 EMILIN1Q9Y6C2 1016 aa6.61□□□□□ -1.35
VPS8-215ENST00000460158 SOS2Q07890 1332 aaPredicted RBP6.6□□□□□ -1.35
VPS8-215ENST00000460158 PPFIA3O75145 1194 aa6.6□□□□□ -1.35
VPS8-215ENST00000460158 FSHRP23945 695 aa6.6□□□□□ -1.35
VPS8-215ENST00000460158 PTK2Q05397 1052 aa6.6□□□□□ -1.35
VPS8-215ENST00000460158 VASH1Q7L8A9 365 aaPredicted RBP6.6□□□□□ -1.35
VPS8-215ENST00000460158 ADAMTS19Q8TE59 1207 aa6.59□□□□□ -1.35
VPS8-215ENST00000460158 ARHGAP9Q9BRR9 750 aa6.59□□□□□ -1.35
VPS8-215ENST00000460158 GPSM3Q9Y4H4 160 aa6.59□□□□□ -1.35
VPS8-215ENST00000460158 HDGFL1Q5TGJ6 251 aa6.58□□□□□ -1.36
VPS8-215ENST00000460158 CCDC116Q8IYX3 515 aa6.58□□□□□ -1.36
VPS8-215ENST00000460158 ADAM32Q8TC27 787 aa6.58□□□□□ -1.36
VPS8-215ENST00000460158 GLMNQ92990 594 aa6.58□□□□□ -1.36
VPS8-215ENST00000460158 CARD14Q9BXL6 1004 aa6.58□□□□□ -1.36
VPS8-215ENST00000460158 MAGEB6P1A0A0J9YX57 407 aa6.57□□□□□ -1.36
VPS8-215ENST00000460158 ZBTB33Q86T24 672 aa6.57□□□□□ -1.36
VPS8-215ENST00000460158 CALR3Q96L12 384 aaKnown RBP6.57□□□□□ -1.36
VPS8-215ENST00000460158 ALG2Q9H553 416 aa6.57□□□□□ -1.36
VPS8-215ENST00000460158 DNMT3LQ9UJW3 386 aa6.57□□□□□ -1.36
VPS8-215ENST00000460158 EIF4G2P78344 907 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS8-215ENST00000460158 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.56□□□□□ -1.36
VPS8-215ENST00000460158 CCDC82Q8N4S0 544 aa6.56□□□□□ -1.36
VPS8-215ENST00000460158 CDV3Q9UKY7 258 aaKnown RBP6.56□□□□□ -1.36
VPS8-215ENST00000460158 TTLL8A6PVC2 850 aa6.55□□□□□ -1.36
VPS8-215ENST00000460158 SOX11P35716 441 aa6.55□□□□□ -1.36
VPS8-215ENST00000460158 SEMA3FQ13275 785 aa6.55□□□□□ -1.36
VPS8-215ENST00000460158 ERFEQ4G0M1 354 aa6.55□□□□□ -1.36
VPS8-215ENST00000460158 Q6ZVU0 165 aa6.55□□□□□ -1.36
VPS8-215ENST00000460158 ARID3AQ99856 593 aa6.55□□□□□ -1.36
VPS8-215ENST00000460158 PGPEP1Q9NXJ5 209 aa6.55□□□□□ -1.36
VPS8-215ENST00000460158 PCDHB9Q9Y5E1 797 aa6.55□□□□□ -1.36
VPS8-215ENST00000460158 PPP1R26Q5T8A7 1209 aaPredicted RBP6.54□□□□□ -1.36
VPS8-215ENST00000460158 SPINT1O43278 529 aa6.53□□□□□ -1.36
VPS8-215ENST00000460158 DHX9Q08211 1270 aaKnown RBP6.53□□□□□ -1.36
VPS8-215ENST00000460158 KCNMA1Q12791 1236 aa6.53□□□□□ -1.36
VPS8-215ENST00000460158 NANOS1Q8WY41 292 aaKnown RBP6.53□□□□□ -1.36
VPS8-215ENST00000460158 PTSQ03393 145 aa6.52□□□□□ -1.37
VPS8-215ENST00000460158 DZIP3Q86Y13 1208 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms