RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 PUS10Q3MIT2 529 aaKnown RBP10.88□□□□□ -0.67
COMMD3-204ENST00000456711 FAM135BQ49AJ0 1406 aa10.87□□□□□ -0.67
COMMD3-204ENST00000456711 FAM161AQ3B820 660 aa10.87□□□□□ -0.67
COMMD3-204ENST00000456711 SPSB2Q99619 263 aa10.87□□□□□ -0.67
COMMD3-204ENST00000456711 RCCD1A6NED2 376 aa10.86□□□□□ -0.67
COMMD3-204ENST00000456711 ANKLE2Q86XL3 938 aa10.86□□□□□ -0.67
COMMD3-204ENST00000456711 TRIM47Q96LD4 638 aa10.86□□□□□ -0.67
COMMD3-204ENST00000456711 FCF1Q9Y324 198 aaKnown RBP10.86□□□□□ -0.67
COMMD3-204ENST00000456711 ADGRG1Q9Y653 693 aa10.86□□□□□ -0.67
COMMD3-204ENST00000456711 MED14O60244 1454 aa10.86□□□□□ -0.67
COMMD3-204ENST00000456711 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
COMMD3-204ENST00000456711 NPHP4O75161 1426 aaPredicted RBP10.84□□□□□ -0.67
COMMD3-204ENST00000456711 DEPDC5O75140 1603 aa10.84□□□□□ -0.67
COMMD3-204ENST00000456711 CD2BP2O95400 341 aaKnown RBP10.84□□□□□ -0.67
COMMD3-204ENST00000456711 SMPD1P17405 629 aa10.84□□□□□ -0.67
COMMD3-204ENST00000456711 TTC24A2A3L6 582 aaPredicted RBP10.83□□□□□ -0.68
COMMD3-204ENST00000456711 ZNF772Q68DY9 489 aaPredicted RBP10.83□□□□□ -0.68
COMMD3-204ENST00000456711 RBM46Q8TBY0 533 aaKnown RBP10.83□□□□□ -0.68
COMMD3-204ENST00000456711 ARHGAP5Q13017 1502 aa10.83□□□□□ -0.68
COMMD3-204ENST00000456711 IQGAP1P46940 1657 aa10.82□□□□□ -0.68
COMMD3-204ENST00000456711 CDK12Q9NYV4 1490 aaPredicted RBP10.82□□□□□ -0.68
COMMD3-204ENST00000456711 CDK13Q14004 1512 aaKnown RBP10.82□□□□□ -0.68
COMMD3-204ENST00000456711 SETBP1Q9Y6X0 1596 aa10.82□□□□□ -0.68
COMMD3-204ENST00000456711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.81□□□□□ -0.68
COMMD3-204ENST00000456711 SUZ12Q15022 739 aaKnown RBP10.81□□□□□ -0.68
COMMD3-204ENST00000456711 XIRP1Q702N8 1843 aaKnown RBP10.81□□□□□ -0.68
COMMD3-204ENST00000456711 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
COMMD3-204ENST00000456711 ABCC1P33527 1531 aa10.8□□□□□ -0.68
COMMD3-204ENST00000456711 ITSN2Q9NZM3 1697 aa10.8□□□□□ -0.68
COMMD3-204ENST00000456711 ROBO1Q9Y6N7 1651 aa10.8□□□□□ -0.68
COMMD3-204ENST00000456711 RXRBP28702 533 aa10.8□□□□□ -0.68
COMMD3-204ENST00000456711 GMPRP36959 345 aa10.79□□□□□ -0.68
COMMD3-204ENST00000456711 JCADQ9P266 1359 aa10.78□□□□□ -0.68
COMMD3-204ENST00000456711 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
COMMD3-204ENST00000456711 PTGDRQ13258 359 aa10.78□□□□□ -0.68
COMMD3-204ENST00000456711 THEMISQ8N1K5 641 aaPredicted RBP10.78□□□□□ -0.68
COMMD3-204ENST00000456711 SENP2Q9HC62 589 aa10.78□□□□□ -0.68
COMMD3-204ENST00000456711 J3QL48 77 aa10.77□□□□□ -0.69
COMMD3-204ENST00000456711 FAM160A2Q8N612 972 aaPredicted RBP10.77□□□□□ -0.69
COMMD3-204ENST00000456711 ZSCAN1Q8NBB4 408 aa10.77□□□□□ -0.69
COMMD3-204ENST00000456711 PRDM9Q9NQV7 894 aa10.77□□□□□ -0.69
COMMD3-204ENST00000456711 KIF14Q15058 1648 aa10.76□□□□□ -0.69
COMMD3-204ENST00000456711 THAP11Q96EK4 314 aa10.76□□□□□ -0.69
COMMD3-204ENST00000456711 LRP6O75581 1613 aa10.76□□□□□ -0.69
COMMD3-204ENST00000456711 TNRQ92752 1358 aa10.76□□□□□ -0.69
COMMD3-204ENST00000456711 CDC42BPBQ9Y5S2 1711 aa10.75□□□□□ -0.69
COMMD3-204ENST00000456711 MEX3CQ5U5Q3 659 aaKnown RBP10.75□□□□□ -0.69
COMMD3-204ENST00000456711 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
COMMD3-204ENST00000456711 PHLPP1O60346 1717 aa10.75□□□□□ -0.69
COMMD3-204ENST00000456711 UGGT1Q9NYU2 1555 aa10.74□□□□□ -0.69
COMMD3-204ENST00000456711 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
COMMD3-204ENST00000456711 GGT6Q6P531 493 aa10.74□□□□□ -0.69
COMMD3-204ENST00000456711 HPS1Q92902 700 aa10.74□□□□□ -0.69
COMMD3-204ENST00000456711 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
COMMD3-204ENST00000456711 PLXNC1O60486 1568 aa10.73□□□□□ -0.69
COMMD3-204ENST00000456711 ZC3H13Q5T200 1668 aaKnown RBP10.73□□□□□ -0.69
COMMD3-204ENST00000456711 WNT7AO00755 349 aa10.73□□□□□ -0.69
COMMD3-204ENST00000456711 SPATA31A6Q5VVP1 1343 aa10.73□□□□□ -0.69
COMMD3-204ENST00000456711 KDM5DQ9BY66 1539 aa10.73□□□□□ -0.69
COMMD3-204ENST00000456711 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
COMMD3-204ENST00000456711 RGS12O14924 1447 aa10.71□□□□□ -0.69
COMMD3-204ENST00000456711 FBXO31Q5XUX0 539 aaPredicted RBP10.71□□□□□ -0.69
COMMD3-204ENST00000456711 LRRC9Q6ZRR7 1453 aa10.71□□□□□ -0.69
COMMD3-204ENST00000456711 MRGPRX2Q96LB1 330 aa10.71□□□□□ -0.69
COMMD3-204ENST00000456711 NLRP1Q9C000 1473 aa10.7□□□□□ -0.7
COMMD3-204ENST00000456711 VEGFBP49765 207 aa10.7□□□□□ -0.7
COMMD3-204ENST00000456711 MORN1Q5T089 497 aa10.7□□□□□ -0.7
COMMD3-204ENST00000456711 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
COMMD3-204ENST00000456711 KIFC2Q96AC6 838 aa10.7□□□□□ -0.7
COMMD3-204ENST00000456711 WDR70Q9NW82 654 aa10.7□□□□□ -0.7
COMMD3-204ENST00000456711 LRP5O75197 1615 aa10.69□□□□□ -0.7
COMMD3-204ENST00000456711 A2MP01023 1474 aa10.69□□□□□ -0.7
COMMD3-204ENST00000456711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.69□□□□□ -0.7
COMMD3-204ENST00000456711 NUTM2BA6NNL0 878 aaPredicted RBP10.69□□□□□ -0.7
COMMD3-204ENST00000456711 NUTM2EB1AL46 878 aaPredicted RBP10.69□□□□□ -0.7
COMMD3-204ENST00000456711 NUTM2DQ5VT03 806 aaPredicted RBP10.69□□□□□ -0.7
COMMD3-204ENST00000456711 NUTM2AQ8IVF1 878 aaPredicted RBP10.69□□□□□ -0.7
COMMD3-204ENST00000456711 NXF1Q9UBU9 619 aaKnown RBP10.69□□□□□ -0.7
COMMD3-204ENST00000456711 CDK11AQ9UQ88 783 aaPredicted RBP10.69□□□□□ -0.7
COMMD3-204ENST00000456711 COL16A1Q07092 1604 aaPredicted RBP10.69□□□□□ -0.7
COMMD3-204ENST00000456711 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
COMMD3-204ENST00000456711 ATP7AQ04656 1500 aa10.68□□□□□ -0.7
COMMD3-204ENST00000456711 PZPP20742 1482 aa10.68□□□□□ -0.7
COMMD3-204ENST00000456711 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
COMMD3-204ENST00000456711 MIA2Q96PC5 1412 aa10.67□□□□□ -0.7
COMMD3-204ENST00000456711 ATAD2Q6PL18 1390 aa10.67□□□□□ -0.7
COMMD3-204ENST00000456711 SPAG9O60271 1321 aaKnown RBP10.67□□□□□ -0.7
COMMD3-204ENST00000456711 ZBTB24O43167 697 aaPredicted RBP10.67□□□□□ -0.7
COMMD3-204ENST00000456711 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
COMMD3-204ENST00000456711 TMEM94Q12767 1356 aa10.66□□□□□ -0.7
COMMD3-204ENST00000456711 RANGAP1P46060 587 aaPredicted RBP10.66□□□□□ -0.7
COMMD3-204ENST00000456711 ERBB4Q15303 1308 aa10.65□□□□□ -0.7
COMMD3-204ENST00000456711 FUT2Q10981 343 aa10.65□□□□□ -0.7
COMMD3-204ENST00000456711 TRIM32Q13049 653 aa10.65□□□□□ -0.7
COMMD3-204ENST00000456711 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
COMMD3-204ENST00000456711 SHPRHQ149N8 1683 aa10.65□□□□□ -0.7
COMMD3-204ENST00000456711 CLIP1P30622 1438 aa10.65□□□□□ -0.7
COMMD3-204ENST00000456711 MAP3K1Q13233 1512 aa10.64□□□□□ -0.71
COMMD3-204ENST00000456711 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
COMMD3-204ENST00000456711 RBM6P78332 1123 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms