RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ARHGAP23Q9P227 1491 aa15.85■□□□□ 0.13
LINC00959-201ENST00000456581 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
LINC00959-201ENST00000456581 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
LINC00959-201ENST00000456581 EIF5BO60841 1220 aaKnown RBP15.84■□□□□ 0.13
LINC00959-201ENST00000456581 SLIT1O75093 1534 aa15.84■□□□□ 0.13
LINC00959-201ENST00000456581 IL13P35225 146 aa15.84■□□□□ 0.13
LINC00959-201ENST00000456581 LRRC7Q96NW7 1537 aa15.83■□□□□ 0.12
LINC00959-201ENST00000456581 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
LINC00959-201ENST00000456581 MYH16Q9H6N6 1097 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 FCHSD2O94868 740 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 PDZRN3Q9UPQ7 1066 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 MON2Q7Z3U7 1717 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 RGPD8O14715 1765 aaPredicted RBP15.81■□□□□ 0.12
LINC00959-201ENST00000456581 AEBP1Q8IUX7 1158 aa15.81■□□□□ 0.12
LINC00959-201ENST00000456581 PLEKHG3A1L390 1219 aa15.81■□□□□ 0.12
LINC00959-201ENST00000456581 NUTM2GQ5VZR2 741 aa15.81■□□□□ 0.12
LINC00959-201ENST00000456581 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
LINC00959-201ENST00000456581 ITSN1Q15811 1721 aa15.8■□□□□ 0.12
LINC00959-201ENST00000456581 HSP90AB2PQ58FF8 381 aa15.79■□□□□ 0.12
LINC00959-201ENST00000456581 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
LINC00959-201ENST00000456581 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
LINC00959-201ENST00000456581 USP6P35125 1406 aa15.79■□□□□ 0.12
LINC00959-201ENST00000456581 SETD1BQ9UPS6 1966 aaKnown RBP15.78■□□□□ 0.12
LINC00959-201ENST00000456581 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
LINC00959-201ENST00000456581 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
LINC00959-201ENST00000456581 GZF1Q9H116 711 aaPredicted RBP15.77■□□□□ 0.12
LINC00959-201ENST00000456581 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.11
LINC00959-201ENST00000456581 AATKQ6ZMQ8 1374 aa15.77■□□□□ 0.11
LINC00959-201ENST00000456581 CEP170BQ9Y4F5 1589 aaPredicted RBP15.77■□□□□ 0.11
LINC00959-201ENST00000456581 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
LINC00959-201ENST00000456581 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
LINC00959-201ENST00000456581 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
LINC00959-201ENST00000456581 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
LINC00959-201ENST00000456581 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
LINC00959-201ENST00000456581 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
LINC00959-201ENST00000456581 TOPAZ1Q8N9V7 1692 aa15.75■□□□□ 0.11
LINC00959-201ENST00000456581 TBC1D2Q9BYX2 928 aa15.75■□□□□ 0.11
LINC00959-201ENST00000456581 DIP2AQ14689 1571 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 PTCH1Q13635 1447 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 LMTK3Q96Q04 1460 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 PNNQ9H307 717 aaKnown RBP15.74■□□□□ 0.11
LINC00959-201ENST00000456581 OVOS2A0A0J9YW53 1432 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 OVOS2Q6IE36 1432 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
LINC00959-201ENST00000456581 ANKLE2Q86XL3 938 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 TSPYL6Q8N831 410 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 RRAGDQ9NQL2 400 aaPredicted RBP15.73■□□□□ 0.11
LINC00959-201ENST00000456581 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 ANTXR1Q9H6X2 564 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 NRKQ7Z2Y5 1582 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 MFAP1P55081 439 aaKnown RBP15.72■□□□□ 0.11
LINC00959-201ENST00000456581 MAP3K19Q56UN5 1328 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 SSH2Q76I76 1423 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
LINC00959-201ENST00000456581 PANK2Q9BZ23 570 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 TRIM27P14373 513 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 TBC1D32Q96NH3 1257 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 NOB1Q9ULX3 412 aaKnown RBP15.72■□□□□ 0.11
LINC00959-201ENST00000456581 AEBP2Q6ZN18 517 aaPredicted RBP15.71■□□□□ 0.11
LINC00959-201ENST00000456581 NLRP6P59044 892 aa15.71■□□□□ 0.1
LINC00959-201ENST00000456581 MVPQ14764 893 aaKnown RBP15.71■□□□□ 0.1
LINC00959-201ENST00000456581 ZKSCAN2Q63HK3 967 aa15.71■□□□□ 0.1
LINC00959-201ENST00000456581 C14orf37Q86TY3 774 aa15.71■□□□□ 0.1
LINC00959-201ENST00000456581 XRN1Q8IZH2 1706 aaKnown RBP15.7■□□□□ 0.1
LINC00959-201ENST00000456581 PEAK1Q9H792 1746 aa15.7■□□□□ 0.1
LINC00959-201ENST00000456581 ITPRIPQ8IWB1 547 aa15.7■□□□□ 0.1
LINC00959-201ENST00000456581 IL16Q14005 1332 aa15.7■□□□□ 0.1
LINC00959-201ENST00000456581 BECN1Q14457 450 aa15.7■□□□□ 0.1
LINC00959-201ENST00000456581 DLG5Q8TDM6 1919 aa15.69■□□□□ 0.1
LINC00959-201ENST00000456581 MBIPQ9NS73 344 aa15.69■□□□□ 0.1
LINC00959-201ENST00000456581 DZIP1LQ8IYY4 767 aaKnown RBP15.69■□□□□ 0.1
LINC00959-201ENST00000456581 FOXO3O43524 673 aa15.68■□□□□ 0.1
LINC00959-201ENST00000456581 MCM10Q7L590 875 aa15.68■□□□□ 0.1
LINC00959-201ENST00000456581 RWDD1Q9H446 243 aaPredicted RBP15.68■□□□□ 0.1
LINC00959-201ENST00000456581 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
LINC00959-201ENST00000456581 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
LINC00959-201ENST00000456581 XPCQ01831 940 aaPredicted RBP15.67■□□□□ 0.1
LINC00959-201ENST00000456581 ABTB2Q8N961 1025 aa15.67■□□□□ 0.1
LINC00959-201ENST00000456581 USP31Q70CQ4 1352 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 ATF7IPQ6VMQ6 1270 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 C8orf58Q8NAV2 365 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 AMPHP49418 695 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 TMEM57Q8N5G2 664 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
LINC00959-201ENST00000456581 VAMP4O75379 141 aa15.65■□□□□ 0.1
LINC00959-201ENST00000456581 TTC21AQ8NDW8 1320 aa15.65■□□□□ 0.1
LINC00959-201ENST00000456581 CT47B1P0C2W7 299 aaPredicted RBP15.65■□□□□ 0.1
LINC00959-201ENST00000456581 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
LINC00959-201ENST00000456581 ZNF853P0CG23 659 aa15.64■□□□□ 0.09
LINC00959-201ENST00000456581 ESCO1Q5FWF5 840 aa15.64■□□□□ 0.09
LINC00959-201ENST00000456581 PIK3C2AO00443 1686 aa15.64■□□□□ 0.09
LINC00959-201ENST00000456581 XRCC6P12956 609 aaKnown RBP eCLIP15.63■□□□□ 0.09
LINC00959-201ENST00000456581 EYA1Q99502 592 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 GNAI1P63096 354 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 C22orf23Q9BZE7 217 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 C1orf115Q9H7X2 142 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 IFT57Q9NWB7 429 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 NALCNQ8IZF0 1738 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms