RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 CABP2Q9NPB3 220 aa19.44■□□□□ 0.7
EPCAM-204ENST00000456133 NLRP6P59044 892 aa19.43■□□□□ 0.7
EPCAM-204ENST00000456133 TOM1L2Q6ZVM7 507 aa19.43■□□□□ 0.7
EPCAM-204ENST00000456133 BCL11BQ9C0K0 894 aaPredicted RBP19.43■□□□□ 0.7
EPCAM-204ENST00000456133 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
EPCAM-204ENST00000456133 PIK3C2AO00443 1686 aa19.42■□□□□ 0.7
EPCAM-204ENST00000456133 ZBTB7AO95365 584 aa19.41■□□□□ 0.7
EPCAM-204ENST00000456133 PROM2Q8N271 834 aa19.41■□□□□ 0.7
EPCAM-204ENST00000456133 USP6P35125 1406 aa19.41■□□□□ 0.7
EPCAM-204ENST00000456133 MARCH10Q8NA82 808 aaPredicted RBP19.41■□□□□ 0.7
EPCAM-204ENST00000456133 CENPJQ9HC77 1338 aaPredicted RBP19.4■□□□□ 0.7
EPCAM-204ENST00000456133 CHD4Q14839 1912 aa19.4■□□□□ 0.7
EPCAM-204ENST00000456133 CABP1Q9NZU7 370 aa19.39■□□□□ 0.69
EPCAM-204ENST00000456133 AXIN2Q9Y2T1 843 aa19.39■□□□□ 0.69
EPCAM-204ENST00000456133 WDR17Q8IZU2 1322 aa19.38■□□□□ 0.69
EPCAM-204ENST00000456133 ATF5Q9Y2D1 282 aaPredicted RBP19.38■□□□□ 0.69
EPCAM-204ENST00000456133 PTGER2P43116 358 aa19.37■□□□□ 0.69
EPCAM-204ENST00000456133 BCL9O00512 1426 aa19.36■□□□□ 0.69
EPCAM-204ENST00000456133 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
EPCAM-204ENST00000456133 TXNRD1Q16881 649 aa19.35■□□□□ 0.69
EPCAM-204ENST00000456133 CDCA7Q9BWT1 371 aaPredicted RBP19.35■□□□□ 0.69
EPCAM-204ENST00000456133 STK32BQ9NY57 414 aa19.35■□□□□ 0.69
EPCAM-204ENST00000456133 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
EPCAM-204ENST00000456133 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
EPCAM-204ENST00000456133 ARHGEF25Q86VW2 580 aa19.33■□□□□ 0.68
EPCAM-204ENST00000456133 ZNF784Q8NCA9 323 aaPredicted RBP19.33■□□□□ 0.68
EPCAM-204ENST00000456133 SOX12O15370 315 aa19.32■□□□□ 0.68
EPCAM-204ENST00000456133 CSB-PGBD3P0DP91 1061 aa19.32■□□□□ 0.68
EPCAM-204ENST00000456133 CARD10Q9BWT7 1032 aa19.32■□□□□ 0.68
EPCAM-204ENST00000456133 FHDC1Q9C0D6 1143 aaPredicted RBP19.32■□□□□ 0.68
EPCAM-204ENST00000456133 NHSQ6T4R5 1651 aa19.32■□□□□ 0.68
EPCAM-204ENST00000456133 SYT17Q9BSW7 474 aa19.31■□□□□ 0.68
EPCAM-204ENST00000456133 TRPM1Q7Z4N2 1603 aa19.31■□□□□ 0.68
EPCAM-204ENST00000456133 EXOC5O00471 708 aa19.3■□□□□ 0.68
EPCAM-204ENST00000456133 TTC21BQ7Z4L5 1316 aa19.29■□□□□ 0.68
EPCAM-204ENST00000456133 KCNH5Q8NCM2 988 aa19.29■□□□□ 0.68
EPCAM-204ENST00000456133 MTFR1LQ9H019 292 aa19.29■□□□□ 0.68
EPCAM-204ENST00000456133 UTRNP46939 3433 aa19.28■□□□□ 0.68
EPCAM-204ENST00000456133 EVC2Q86UK5 1308 aa19.28■□□□□ 0.68
EPCAM-204ENST00000456133 BTAF1O14981 1849 aa19.28■□□□□ 0.68
EPCAM-204ENST00000456133 NFAT5O94916 1531 aa19.27■□□□□ 0.68
EPCAM-204ENST00000456133 SGIP1Q9BQI5 828 aa19.27■□□□□ 0.68
EPCAM-204ENST00000456133 TNS2Q63HR2 1409 aa19.27■□□□□ 0.68
EPCAM-204ENST00000456133 CCDC7Q96M83 1385 aa19.27■□□□□ 0.67
EPCAM-204ENST00000456133 ZNF692Q9BU19 519 aaPredicted RBP19.25■□□□□ 0.67
EPCAM-204ENST00000456133 PAPPAQ13219 1627 aa19.25■□□□□ 0.67
EPCAM-204ENST00000456133 ACSBG1Q96GR2 724 aa19.25■□□□□ 0.67
EPCAM-204ENST00000456133 LTN1O94822 1766 aa19.24■□□□□ 0.67
EPCAM-204ENST00000456133 TTC21AQ8NDW8 1320 aa19.24■□□□□ 0.67
EPCAM-204ENST00000456133 MON2Q7Z3U7 1717 aa19.23■□□□□ 0.67
EPCAM-204ENST00000456133 ABCC6O95255 1503 aa19.23■□□□□ 0.67
EPCAM-204ENST00000456133 ARXQ96QS3 562 aa19.23■□□□□ 0.67
EPCAM-204ENST00000456133 SENP3-EIF4A1A0A087X0R7 540 aa19.22■□□□□ 0.67
EPCAM-204ENST00000456133 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
EPCAM-204ENST00000456133 QSER1Q2KHR3 1735 aa19.19■□□□□ 0.66
EPCAM-204ENST00000456133 C1QTNF8P60827 252 aa19.19■□□□□ 0.66
EPCAM-204ENST00000456133 ZNF827Q17R98 1081 aa19.19■□□□□ 0.66
EPCAM-204ENST00000456133 USP54Q70EL1 1684 aa19.19■□□□□ 0.66
EPCAM-204ENST00000456133 NLRP2Q9NX02 1062 aa19.19■□□□□ 0.66
EPCAM-204ENST00000456133 MAP3K5Q99683 1374 aa19.18■□□□□ 0.66
EPCAM-204ENST00000456133 L3MBTL2Q969R5 705 aa19.18■□□□□ 0.66
EPCAM-204ENST00000456133 TUBGCP6Q96RT7 1819 aa19.18■□□□□ 0.66
EPCAM-204ENST00000456133 ERBB3P21860 1342 aa19.16■□□□□ 0.66
EPCAM-204ENST00000456133 COL24A1Q17RW2 1714 aa19.16■□□□□ 0.66
EPCAM-204ENST00000456133 IL2RBP14784 551 aa19.16■□□□□ 0.66
EPCAM-204ENST00000456133 LRRC4BQ9NT99 713 aa19.16■□□□□ 0.66
EPCAM-204ENST00000456133 GPR162Q16538 588 aa19.15■□□□□ 0.66
EPCAM-204ENST00000456133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.15■□□□□ 0.66
EPCAM-204ENST00000456133 USP31Q70CQ4 1352 aa19.14■□□□□ 0.65
EPCAM-204ENST00000456133 NME9Q86XW9 330 aa19.13■□□□□ 0.65
EPCAM-204ENST00000456133 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
EPCAM-204ENST00000456133 ROCK2O75116 1388 aaKnown RBP19.13■□□□□ 0.65
EPCAM-204ENST00000456133 ANKRD24Q8TF21 1146 aa19.12■□□□□ 0.65
EPCAM-204ENST00000456133 AKT1S1Q96B36 256 aa19.11■□□□□ 0.65
EPCAM-204ENST00000456133 PELP1Q8IZL8 1130 aaKnown RBP19.1■□□□□ 0.65
EPCAM-204ENST00000456133 SLC16A10Q8TF71 515 aa19.1■□□□□ 0.65
EPCAM-204ENST00000456133 CD163L1Q9NR16 1453 aa19.09■□□□□ 0.65
EPCAM-204ENST00000456133 LY75O60449 1722 aa19.09■□□□□ 0.65
EPCAM-204ENST00000456133 POLD1P28340 1107 aa19.09■□□□□ 0.65
EPCAM-204ENST00000456133 SBNO2Q9Y2G9 1366 aa19.09■□□□□ 0.65
EPCAM-204ENST00000456133 FAM208AQ9UK61 1670 aaKnown RBP19.09■□□□□ 0.65
EPCAM-204ENST00000456133 PNPLA7Q6ZV29 1317 aa19.08■□□□□ 0.65
EPCAM-204ENST00000456133 DOT1LQ8TEK3 1739 aa19.08■□□□□ 0.65
EPCAM-204ENST00000456133 GOLGB1Q14789 3259 aaKnown RBP19.08■□□□□ 0.64
EPCAM-204ENST00000456133 SIN3AQ96ST3 1273 aa19.08■□□□□ 0.64
EPCAM-204ENST00000456133 SHANK3Q9BYB0 1731 aa19.08■□□□□ 0.64
EPCAM-204ENST00000456133 RGPD2P0DJD1 1756 aa19.07■□□□□ 0.64
EPCAM-204ENST00000456133 GIGYF1O75420 1035 aaPredicted RBP19.07■□□□□ 0.64
EPCAM-204ENST00000456133 SLC27A3Q5K4L6 730 aa19.07■□□□□ 0.64
EPCAM-204ENST00000456133 DDX54Q8TDD1 881 aaKnown RBP19.07■□□□□ 0.64
EPCAM-204ENST00000456133 KCNQ4P56696 695 aa19.06■□□□□ 0.64
EPCAM-204ENST00000456133 NLGN2Q8NFZ4 835 aa19.05■□□□□ 0.64
EPCAM-204ENST00000456133 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
EPCAM-204ENST00000456133 TFCP2L1Q9NZI6 479 aa19.05■□□□□ 0.64
EPCAM-204ENST00000456133 HDGFL2Q7Z4V5 671 aaPredicted RBP19.04■□□□□ 0.64
EPCAM-204ENST00000456133 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
EPCAM-204ENST00000456133 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
EPCAM-204ENST00000456133 SYTL4Q96C24 671 aaPredicted RBP19.03■□□□□ 0.64
EPCAM-204ENST00000456133 SLC12A5Q9H2X9 1139 aa19.03■□□□□ 0.64
EPCAM-204ENST00000456133 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms