RNA–Protein interactions for RNA: ENST00000455403.1

SAMM50P1-201, Transcript of SAMM50 sorting and assembly machinery component pseudogene 1, humanhuman

BASIC

Gene SAMM50P1, Length 1,399 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50P1-201ENST00000455403 MAFBQ9Y5Q3 323 aaPredicted RBP8.75□□□□□ -1.01
SAMM50P1-201ENST00000455403 CLSPNQ9HAW4 1339 aa8.75□□□□□ -1.01
SAMM50P1-201ENST00000455403 TLL1O43897 1013 aa8.74□□□□□ -1.01
SAMM50P1-201ENST00000455403 MSS51Q4VC12 460 aa8.74□□□□□ -1.01
SAMM50P1-201ENST00000455403 LRRN4Q8WUT4 740 aa8.74□□□□□ -1.01
SAMM50P1-201ENST00000455403 ZNF516Q92618 1163 aa8.74□□□□□ -1.01
SAMM50P1-201ENST00000455403 ABCC10Q5T3U5 1492 aa8.74□□□□□ -1.01
SAMM50P1-201ENST00000455403 ADH1BP00325 375 aa8.73□□□□□ -1.01
SAMM50P1-201ENST00000455403 KCNC4Q03721 635 aa8.73□□□□□ -1.01
SAMM50P1-201ENST00000455403 EPS8L1Q8TE68 723 aa8.73□□□□□ -1.01
SAMM50P1-201ENST00000455403 SYMPKQ92797 1274 aaKnown RBP8.73□□□□□ -1.01
SAMM50P1-201ENST00000455403 SPSB2Q99619 263 aa8.73□□□□□ -1.01
SAMM50P1-201ENST00000455403 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
SAMM50P1-201ENST00000455403 TOP2BQ02880 1626 aa8.73□□□□□ -1.01
SAMM50P1-201ENST00000455403 IGSF5Q9NSI5 407 aa8.73□□□□□ -1.01
SAMM50P1-201ENST00000455403 SYNJ1O43426 1573 aa8.72□□□□□ -1.01
SAMM50P1-201ENST00000455403 IFFO2Q5TF58 517 aa8.72□□□□□ -1.01
SAMM50P1-201ENST00000455403 DIEXFQ68CQ4 756 aaKnown RBP8.72□□□□□ -1.01
SAMM50P1-201ENST00000455403 TBC1D9Q6ZT07 1266 aa8.72□□□□□ -1.01
SAMM50P1-201ENST00000455403 RBM47A0AV96 593 aaKnown RBP8.71□□□□□ -1.02
SAMM50P1-201ENST00000455403 CFAP99D6REC4 459 aa8.71□□□□□ -1.02
SAMM50P1-201ENST00000455403 DESI1Q6ICB0 168 aa8.71□□□□□ -1.02
SAMM50P1-201ENST00000455403 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
SAMM50P1-201ENST00000455403 TSC1Q92574 1164 aa8.7□□□□□ -1.02
SAMM50P1-201ENST00000455403 TSPOAP1O95153 1857 aa8.7□□□□□ -1.02
SAMM50P1-201ENST00000455403 AQRO60306 1485 aaKnown RBP eCLIP8.69□□□□□ -1.02
SAMM50P1-201ENST00000455403 NKX2-3Q8TAU0 364 aa8.69□□□□□ -1.02
SAMM50P1-201ENST00000455403 CHMP7Q8WUX9 453 aaPredicted RBP8.69□□□□□ -1.02
SAMM50P1-201ENST00000455403 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
SAMM50P1-201ENST00000455403 DXOO77932 396 aaKnown RBP8.68□□□□□ -1.02
SAMM50P1-201ENST00000455403 MMP16P51512 607 aa8.68□□□□□ -1.02
SAMM50P1-201ENST00000455403 HELBQ8NG08 1087 aaPredicted RBP8.68□□□□□ -1.02
SAMM50P1-201ENST00000455403 STK32AQ8WU08 396 aa8.68□□□□□ -1.02
SAMM50P1-201ENST00000455403 KIAA1522Q9P206 1035 aaPredicted RBP8.68□□□□□ -1.02
SAMM50P1-201ENST00000455403 JUNDP17535 347 aa8.67□□□□□ -1.02
SAMM50P1-201ENST00000455403 SOX11P35716 441 aa8.67□□□□□ -1.02
SAMM50P1-201ENST00000455403 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
SAMM50P1-201ENST00000455403 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
SAMM50P1-201ENST00000455403 PHLDB3Q6NSJ2 640 aa8.67□□□□□ -1.02
SAMM50P1-201ENST00000455403 TXNDC2Q86VQ3 553 aa8.67□□□□□ -1.02
SAMM50P1-201ENST00000455403 SLC6A16Q9GZN6 736 aa8.67□□□□□ -1.02
SAMM50P1-201ENST00000455403 PRDM9Q9NQV7 894 aa8.67□□□□□ -1.02
SAMM50P1-201ENST00000455403 ATP9BO43861 1147 aa8.66□□□□□ -1.02
SAMM50P1-201ENST00000455403 KANK4Q5T7N3 995 aaPredicted RBP8.66□□□□□ -1.02
SAMM50P1-201ENST00000455403 B4GALNT3Q6L9W6 998 aa8.66□□□□□ -1.02
SAMM50P1-201ENST00000455403 DNAJC14Q6Y2X3 702 aaPredicted RBP8.66□□□□□ -1.02
SAMM50P1-201ENST00000455403 BCL11AQ9H165 835 aa8.66□□□□□ -1.02
SAMM50P1-201ENST00000455403 DIP2BQ9P265 1576 aa8.65□□□□□ -1.03
SAMM50P1-201ENST00000455403 S1PR4O95977 384 aa8.64□□□□□ -1.03
SAMM50P1-201ENST00000455403 PTPRNQ16849 979 aa8.64□□□□□ -1.03
SAMM50P1-201ENST00000455403 NOM1Q5C9Z4 860 aaKnown RBP8.64□□□□□ -1.03
SAMM50P1-201ENST00000455403 CCER1Q8TC90 406 aaPredicted RBP8.64□□□□□ -1.03
SAMM50P1-201ENST00000455403 MRRFQ96E11 262 aaKnown RBP8.64□□□□□ -1.03
SAMM50P1-201ENST00000455403 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
SAMM50P1-201ENST00000455403 ELOAQ14241 798 aaKnown RBP8.63□□□□□ -1.03
SAMM50P1-201ENST00000455403 NR6A1Q15406 480 aa8.63□□□□□ -1.03
SAMM50P1-201ENST00000455403 LYPD8Q6UX82 237 aa8.63□□□□□ -1.03
SAMM50P1-201ENST00000455403 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
SAMM50P1-201ENST00000455403 PCF11O94913 1555 aaKnown RBP8.62□□□□□ -1.03
SAMM50P1-201ENST00000455403 PIK3CDO00329 1044 aa8.62□□□□□ -1.03
SAMM50P1-201ENST00000455403 SLAIN2Q9P270 581 aa8.62□□□□□ -1.03
SAMM50P1-201ENST00000455403 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
SAMM50P1-201ENST00000455403 PUS7Q96PZ0 661 aaKnown RBP8.61□□□□□ -1.03
SAMM50P1-201ENST00000455403 NOVA2Q9UNW9 492 aaKnown RBP8.61□□□□□ -1.03
SAMM50P1-201ENST00000455403 PER1O15534 1290 aaPredicted RBP8.61□□□□□ -1.03
SAMM50P1-201ENST00000455403 GGCXP38435 758 aa8.61□□□□□ -1.03
SAMM50P1-201ENST00000455403 NUDT12Q9BQG2 462 aa8.61□□□□□ -1.03
SAMM50P1-201ENST00000455403 F12P00748 615 aaPredicted RBP8.6□□□□□ -1.03
SAMM50P1-201ENST00000455403 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
SAMM50P1-201ENST00000455403 ZNF16P17020 682 aaPredicted RBP8.6□□□□□ -1.03
SAMM50P1-201ENST00000455403 PPP1R18Q6NYC8 613 aa8.6□□□□□ -1.03
SAMM50P1-201ENST00000455403 A0A0G2JS52 829 aa8.59□□□□□ -1.03
SAMM50P1-201ENST00000455403 RNF223E7ERA6 249 aa8.59□□□□□ -1.03
SAMM50P1-201ENST00000455403 HSPA2P54652 639 aa8.59□□□□□ -1.03
SAMM50P1-201ENST00000455403 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
SAMM50P1-201ENST00000455403 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
SAMM50P1-201ENST00000455403 FCF1Q9Y324 198 aaKnown RBP8.59□□□□□ -1.03
SAMM50P1-201ENST00000455403 USP17L3A6NCW0 530 aa8.58□□□□□ -1.04
SAMM50P1-201ENST00000455403 USP17L4A6NCW7 530 aa8.58□□□□□ -1.04
SAMM50P1-201ENST00000455403 HMGB1P09429 215 aaKnown RBP8.58□□□□□ -1.04
SAMM50P1-201ENST00000455403 SSFA2P28290 1259 aa8.58□□□□□ -1.04
SAMM50P1-201ENST00000455403 EIF4G2P78344 907 aaKnown RBP eCLIP8.58□□□□□ -1.04
SAMM50P1-201ENST00000455403 USP17L2Q6R6M4 530 aa8.58□□□□□ -1.04
SAMM50P1-201ENST00000455403 USP17L1Q7RTZ2 530 aa8.58□□□□□ -1.04
SAMM50P1-201ENST00000455403 MED1Q15648 1581 aaPredicted RBP8.57□□□□□ -1.04
SAMM50P1-201ENST00000455403 SOWAHDA6NJG2 315 aa8.57□□□□□ -1.04
SAMM50P1-201ENST00000455403 SERPINB4P48594 390 aa8.57□□□□□ -1.04
SAMM50P1-201ENST00000455403 EVA1BQ9NVM1 165 aa8.57□□□□□ -1.04
SAMM50P1-201ENST00000455403 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
SAMM50P1-201ENST00000455403 ERCC3P19447 782 aa8.56□□□□□ -1.04
SAMM50P1-201ENST00000455403 CDK11BP21127 795 aaKnown RBP8.56□□□□□ -1.04
SAMM50P1-201ENST00000455403 ARID4AP29374 1257 aaPredicted RBP8.56□□□□□ -1.04
SAMM50P1-201ENST00000455403 BCL2L13Q9BXK5 485 aa8.56□□□□□ -1.04
SAMM50P1-201ENST00000455403 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
SAMM50P1-201ENST00000455403 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
SAMM50P1-201ENST00000455403 MAPKBP1O60336 1514 aa8.55□□□□□ -1.04
SAMM50P1-201ENST00000455403 PPEF1O14829 653 aaPredicted RBP8.55□□□□□ -1.04
SAMM50P1-201ENST00000455403 KCNH2Q12809 1159 aa8.55□□□□□ -1.04
SAMM50P1-201ENST00000455403 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
SAMM50P1-201ENST00000455403 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms