RNA–Protein interactions for RNA: ENST00000455394.5

KIF3C-204, Transcript of kinesin family member 3C, humanhuman

TSL 1 (best)

Gene KIF3C, Length 5,462 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3C-204ENST00000455394 RTCBQ9Y3I0 505 aaKnown RBP17.89■□□□□ 0.45
KIF3C-204ENST00000455394 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.45
KIF3C-204ENST00000455394 TRIM6-TRIM34B2RNG4 842 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 RGS3P49796 1198 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 NBPF1Q3BBV0 1214 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 ZKSCAN2Q63HK3 967 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 ZNF622Q969S3 477 aaKnown RBP eCLIP17.88■□□□□ 0.45
KIF3C-204ENST00000455394 CCDC27Q2M243 656 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 HDGFL1Q5TGJ6 251 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 PIK3R4Q99570 1358 aa17.88■□□□□ 0.45
KIF3C-204ENST00000455394 DEKP35659 375 aaKnown RBP17.88■□□□□ 0.45
KIF3C-204ENST00000455394 SLF2Q8IX21 1173 aa17.87■□□□□ 0.45
KIF3C-204ENST00000455394 PLEKHG1Q9ULL1 1385 aa17.87■□□□□ 0.45
KIF3C-204ENST00000455394 PHF14O94880 888 aa17.87■□□□□ 0.45
KIF3C-204ENST00000455394 MFAP1P55081 439 aaKnown RBP17.87■□□□□ 0.45
KIF3C-204ENST00000455394 RUFY2Q8WXA3 655 aa17.87■□□□□ 0.45
KIF3C-204ENST00000455394 NPATQ14207 1427 aa17.87■□□□□ 0.45
KIF3C-204ENST00000455394 FAM196AQ6ZSG2 479 aa17.86■□□□□ 0.45
KIF3C-204ENST00000455394 HTATSF1O43719 755 aaKnown RBP17.86■□□□□ 0.45
KIF3C-204ENST00000455394 RRS1Q15050 365 aaKnown RBP17.86■□□□□ 0.45
KIF3C-204ENST00000455394 GPR162Q16538 588 aa17.86■□□□□ 0.45
KIF3C-204ENST00000455394 NYXQ9GZU5 481 aa17.86■□□□□ 0.45
KIF3C-204ENST00000455394 FCHSD2O94868 740 aa17.86■□□□□ 0.45
KIF3C-204ENST00000455394 GNAI3P08754 354 aa17.85■□□□□ 0.45
KIF3C-204ENST00000455394 UBTFL1P0CB47 393 aaPredicted RBP17.85■□□□□ 0.45
KIF3C-204ENST00000455394 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
KIF3C-204ENST00000455394 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
KIF3C-204ENST00000455394 ERICH2A1L162 156 aa17.85■□□□□ 0.45
KIF3C-204ENST00000455394 CCDC57Q2TAC2 916 aa17.85■□□□□ 0.45
KIF3C-204ENST00000455394 CCDC87Q9NVE4 849 aa17.85■□□□□ 0.45
KIF3C-204ENST00000455394 ATP6V1AP38606 617 aa17.85■□□□□ 0.45
KIF3C-204ENST00000455394 MYO1BO43795 1136 aa17.84■□□□□ 0.45
KIF3C-204ENST00000455394 ERC1Q8IUD2 1116 aa17.84■□□□□ 0.45
KIF3C-204ENST00000455394 SIRT1Q96EB6 747 aa17.84■□□□□ 0.45
KIF3C-204ENST00000455394 BCL2L13Q9BXK5 485 aa17.84■□□□□ 0.45
KIF3C-204ENST00000455394 JDP2Q8WYK2 163 aa17.84■□□□□ 0.45
KIF3C-204ENST00000455394 DHX16O60231 1041 aaKnown RBP17.84■□□□□ 0.45
KIF3C-204ENST00000455394 PPIP5K1Q6PFW1 1433 aa17.84■□□□□ 0.45
KIF3C-204ENST00000455394 EFCAB6Q5THR3 1501 aa17.84■□□□□ 0.45
KIF3C-204ENST00000455394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.84■□□□□ 0.45
KIF3C-204ENST00000455394 CPLX2Q6PUV4 134 aaKnown RBP17.84■□□□□ 0.45
KIF3C-204ENST00000455394 PUS7Q96PZ0 661 aaKnown RBP17.83■□□□□ 0.45
KIF3C-204ENST00000455394 HDAC9Q9UKV0 1011 aa17.83■□□□□ 0.45
KIF3C-204ENST00000455394 CFAP43Q8NDM7 1665 aa17.83■□□□□ 0.45
KIF3C-204ENST00000455394 ERC2O15083 957 aa17.83■□□□□ 0.45
KIF3C-204ENST00000455394 PTCD1O75127 700 aaKnown RBP17.83■□□□□ 0.45
KIF3C-204ENST00000455394 TRDNQ13061 729 aa17.83■□□□□ 0.45
KIF3C-204ENST00000455394 DDX46Q7L014 1031 aaKnown RBP17.83■□□□□ 0.45
KIF3C-204ENST00000455394 FBXO41Q8TF61 875 aa17.83■□□□□ 0.45
KIF3C-204ENST00000455394 PLIN1O60240 522 aa17.83■□□□□ 0.44
KIF3C-204ENST00000455394 APPP05067 770 aa17.82■□□□□ 0.44
KIF3C-204ENST00000455394 NOC3LQ8WTT2 800 aaKnown RBP17.82■□□□□ 0.44
KIF3C-204ENST00000455394 NSD3Q9BZ95 1437 aa17.82■□□□□ 0.44
KIF3C-204ENST00000455394 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
KIF3C-204ENST00000455394 CCDC158Q5M9N0 1113 aa17.82■□□□□ 0.44
KIF3C-204ENST00000455394 SAMD9Q5K651 1589 aa17.82■□□□□ 0.44
KIF3C-204ENST00000455394 KRI1Q8N9T8 703 aaKnown RBP17.82■□□□□ 0.44
KIF3C-204ENST00000455394 GOLGA6L1Q8N7Z2 621 aa17.81■□□□□ 0.44
KIF3C-204ENST00000455394 NME9Q86XW9 330 aa17.81■□□□□ 0.44
KIF3C-204ENST00000455394 SETDB2Q96T68 719 aa17.81■□□□□ 0.44
KIF3C-204ENST00000455394 FAM98CQ17RN3 349 aaKnown RBP17.81■□□□□ 0.44
KIF3C-204ENST00000455394 ACSBG1Q96GR2 724 aa17.81■□□□□ 0.44
KIF3C-204ENST00000455394 NEUROD6Q96NK8 337 aa17.81■□□□□ 0.44
KIF3C-204ENST00000455394 MAST1Q9Y2H9 1570 aa17.8■□□□□ 0.44
KIF3C-204ENST00000455394 ARAP3Q8WWN8 1544 aa17.8■□□□□ 0.44
KIF3C-204ENST00000455394 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
KIF3C-204ENST00000455394 PIK3C2GO75747 1445 aa17.8■□□□□ 0.44
KIF3C-204ENST00000455394 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
KIF3C-204ENST00000455394 RBM6P78332 1123 aaKnown RBP17.8■□□□□ 0.44
KIF3C-204ENST00000455394 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
KIF3C-204ENST00000455394 NBPF5PQ86XG9 351 aaPredicted RBP17.8■□□□□ 0.44
KIF3C-204ENST00000455394 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
KIF3C-204ENST00000455394 RCAN3Q9UKA8 241 aa17.8■□□□□ 0.44
KIF3C-204ENST00000455394 CCNL1Q9UK58 526 aaPredicted RBP17.79■□□□□ 0.44
KIF3C-204ENST00000455394 A2ML1A8K2U0 1454 aa17.79■□□□□ 0.44
KIF3C-204ENST00000455394 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.79■□□□□ 0.44
KIF3C-204ENST00000455394 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
KIF3C-204ENST00000455394 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
KIF3C-204ENST00000455394 WASHC4Q2M389 1173 aa17.79■□□□□ 0.44
KIF3C-204ENST00000455394 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
KIF3C-204ENST00000455394 CDC5LQ99459 802 aaKnown RBP17.78■□□□□ 0.44
KIF3C-204ENST00000455394 GBP4Q96PP9 640 aa17.78■□□□□ 0.44
KIF3C-204ENST00000455394 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
KIF3C-204ENST00000455394 KRT27Q7Z3Y8 459 aa17.78■□□□□ 0.44
KIF3C-204ENST00000455394 SPATA31A6Q5VVP1 1343 aa17.78■□□□□ 0.44
KIF3C-204ENST00000455394 JCADQ9P266 1359 aa17.78■□□□□ 0.44
KIF3C-204ENST00000455394 MYL6BP14649 208 aa17.78■□□□□ 0.44
KIF3C-204ENST00000455394 CAVIN4Q5BKX8 364 aa17.78■□□□□ 0.44
KIF3C-204ENST00000455394 ZSCAN25Q6NSZ9 544 aa17.78■□□□□ 0.44
KIF3C-204ENST00000455394 KDM5CP41229 1560 aa17.78■□□□□ 0.44
KIF3C-204ENST00000455394 APAF1O14727 1248 aa17.77■□□□□ 0.44
KIF3C-204ENST00000455394 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
KIF3C-204ENST00000455394 DIAPH3Q9NSV4 1193 aa17.77■□□□□ 0.44
KIF3C-204ENST00000455394 DDX19BQ9UMR2 479 aa17.77■□□□□ 0.44
KIF3C-204ENST00000455394 GCP02774 474 aa17.77■□□□□ 0.43
KIF3C-204ENST00000455394 CCDC43Q96MW1 224 aaKnown RBP17.77■□□□□ 0.43
KIF3C-204ENST00000455394 YTHDC2Q9H6S0 1430 aaKnown RBP17.77■□□□□ 0.43
KIF3C-204ENST00000455394 EYA3Q99504 573 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms