RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 MARCH10Q8NA82 808 aaPredicted RBP25.16■■□□□ 1.62
UBE2D4-209ENST00000454428 NBPF1Q3BBV0 1214 aa25.15■■□□□ 1.62
UBE2D4-209ENST00000454428 PIK3C2AO00443 1686 aa25.15■■□□□ 1.62
UBE2D4-209ENST00000454428 AKAP12Q02952 1782 aa25.15■■□□□ 1.62
UBE2D4-209ENST00000454428 BRD4O60885 1362 aaPredicted RBP25.15■■□□□ 1.62
UBE2D4-209ENST00000454428 USP6P35125 1406 aa25.14■■□□□ 1.62
UBE2D4-209ENST00000454428 CABP2Q9NPB3 220 aa25.14■■□□□ 1.62
UBE2D4-209ENST00000454428 AXIN2Q9Y2T1 843 aa25.14■■□□□ 1.62
UBE2D4-209ENST00000454428 ZBTB7CA1YPR0 619 aa25.13■■□□□ 1.61
UBE2D4-209ENST00000454428 ZNF784Q8NCA9 323 aaPredicted RBP25.13■■□□□ 1.61
UBE2D4-209ENST00000454428 SRPK2P78362 688 aaKnown RBP25.12■■□□□ 1.61
UBE2D4-209ENST00000454428 RGPD5Q99666 1765 aa25.11■■□□□ 1.61
UBE2D4-209ENST00000454428 NLRP6P59044 892 aa25.11■■□□□ 1.61
UBE2D4-209ENST00000454428 TOM1L2Q6ZVM7 507 aa25.11■■□□□ 1.61
UBE2D4-209ENST00000454428 WDR17Q8IZU2 1322 aa25.11■■□□□ 1.61
UBE2D4-209ENST00000454428 ATF5Q9Y2D1 282 aaPredicted RBP25.1■■□□□ 1.61
UBE2D4-209ENST00000454428 GOLGB1Q14789 3259 aaKnown RBP25.08■■□□□ 1.61
UBE2D4-209ENST00000454428 QRICH2Q9H0J4 1663 aa25.08■■□□□ 1.61
UBE2D4-209ENST00000454428 CABP1Q9NZU7 370 aa25.08■■□□□ 1.61
UBE2D4-209ENST00000454428 CPSF1Q10570 1443 aaKnown RBP25.07■■□□□ 1.6
UBE2D4-209ENST00000454428 TXNRD1Q16881 649 aa25.07■■□□□ 1.6
UBE2D4-209ENST00000454428 SGIP1Q9BQI5 828 aa25.07■■□□□ 1.6
UBE2D4-209ENST00000454428 CENPJQ9HC77 1338 aaPredicted RBP25.07■■□□□ 1.6
UBE2D4-209ENST00000454428 SYT17Q9BSW7 474 aa25.06■■□□□ 1.6
UBE2D4-209ENST00000454428 FHDC1Q9C0D6 1143 aaPredicted RBP25.06■■□□□ 1.6
UBE2D4-209ENST00000454428 SLC15A2Q16348 729 aa25.05■■□□□ 1.6
UBE2D4-209ENST00000454428 CHD4Q14839 1912 aa25.05■■□□□ 1.6
UBE2D4-209ENST00000454428 ARHGEF25Q86VW2 580 aa25.04■■□□□ 1.6
UBE2D4-209ENST00000454428 CDCA7Q9BWT1 371 aaPredicted RBP25.04■■□□□ 1.6
UBE2D4-209ENST00000454428 STK32BQ9NY57 414 aa25.03■■□□□ 1.6
UBE2D4-209ENST00000454428 CARD10Q9BWT7 1032 aa25.02■■□□□ 1.6
UBE2D4-209ENST00000454428 PAPPAQ13219 1627 aa25.01■■□□□ 1.59
UBE2D4-209ENST00000454428 TRPM1Q7Z4N2 1603 aa25.01■■□□□ 1.59
UBE2D4-209ENST00000454428 NHSQ6T4R5 1651 aa25.01■■□□□ 1.59
UBE2D4-209ENST00000454428 MTFR1LQ9H019 292 aa25■■□□□ 1.59
UBE2D4-209ENST00000454428 NFAT5O94916 1531 aa24.99■■□□□ 1.59
UBE2D4-209ENST00000454428 TNS2Q63HR2 1409 aa24.98■■□□□ 1.59
UBE2D4-209ENST00000454428 TTC21BQ7Z4L5 1316 aa24.96■■□□□ 1.59
UBE2D4-209ENST00000454428 EXOC5O00471 708 aa24.96■■□□□ 1.59
UBE2D4-209ENST00000454428 MAP3K5Q99683 1374 aa24.93■■□□□ 1.58
UBE2D4-209ENST00000454428 SOX12O15370 315 aa24.93■■□□□ 1.58
UBE2D4-209ENST00000454428 CSB-PGBD3P0DP91 1061 aa24.93■■□□□ 1.58
UBE2D4-209ENST00000454428 C1QTNF8P60827 252 aa24.93■■□□□ 1.58
UBE2D4-209ENST00000454428 KCNH5Q8NCM2 988 aa24.93■■□□□ 1.58
UBE2D4-209ENST00000454428 CCDC7Q96M83 1385 aa24.93■■□□□ 1.58
UBE2D4-209ENST00000454428 ABCC6O95255 1503 aa24.92■■□□□ 1.58
UBE2D4-209ENST00000454428 CEP350Q5VT06 3117 aa24.92■■□□□ 1.58
UBE2D4-209ENST00000454428 BTAF1O14981 1849 aa24.92■■□□□ 1.58
UBE2D4-209ENST00000454428 SENP3-EIF4A1A0A087X0R7 540 aa24.92■■□□□ 1.58
UBE2D4-209ENST00000454428 ARXQ96QS3 562 aa24.91■■□□□ 1.58
UBE2D4-209ENST00000454428 ACSBG1Q96GR2 724 aa24.9■■□□□ 1.58
UBE2D4-209ENST00000454428 ZNF827Q17R98 1081 aa24.89■■□□□ 1.58
UBE2D4-209ENST00000454428 EVC2Q86UK5 1308 aa24.88■■□□□ 1.57
UBE2D4-209ENST00000454428 TTC21AQ8NDW8 1320 aa24.87■■□□□ 1.57
UBE2D4-209ENST00000454428 COL24A1Q17RW2 1714 aa24.87■■□□□ 1.57
UBE2D4-209ENST00000454428 ZNF692Q9BU19 519 aaPredicted RBP24.87■■□□□ 1.57
UBE2D4-209ENST00000454428 LRRC4BQ9NT99 713 aa24.87■■□□□ 1.57
UBE2D4-209ENST00000454428 MON2Q7Z3U7 1717 aa24.85■■□□□ 1.57
UBE2D4-209ENST00000454428 USP54Q70EL1 1684 aa24.85■■□□□ 1.57
UBE2D4-209ENST00000454428 QSER1Q2KHR3 1735 aa24.83■■□□□ 1.57
UBE2D4-209ENST00000454428 ERBB3P21860 1342 aa24.83■■□□□ 1.56
UBE2D4-209ENST00000454428 LTN1O94822 1766 aa24.82■■□□□ 1.56
UBE2D4-209ENST00000454428 AKT1S1Q96B36 256 aa24.81■■□□□ 1.56
UBE2D4-209ENST00000454428 TUBGCP6Q96RT7 1819 aa24.81■■□□□ 1.56
UBE2D4-209ENST00000454428 KTN1Q86UP2 1357 aaKnown RBP24.8■■□□□ 1.56
UBE2D4-209ENST00000454428 USP31Q70CQ4 1352 aa24.8■■□□□ 1.56
UBE2D4-209ENST00000454428 SHANK3Q9BYB0 1731 aa24.79■■□□□ 1.56
UBE2D4-209ENST00000454428 KAT6BQ8WYB5 2073 aa24.79■■□□□ 1.56
UBE2D4-209ENST00000454428 IL2RBP14784 551 aa24.78■■□□□ 1.56
UBE2D4-209ENST00000454428 GPR162Q16538 588 aa24.78■■□□□ 1.56
UBE2D4-209ENST00000454428 NLRP2Q9NX02 1062 aa24.78■■□□□ 1.56
UBE2D4-209ENST00000454428 L3MBTL2Q969R5 705 aa24.77■■□□□ 1.56
UBE2D4-209ENST00000454428 CD163L1Q9NR16 1453 aa24.77■■□□□ 1.56
UBE2D4-209ENST00000454428 PNPLA7Q6ZV29 1317 aa24.76■■□□□ 1.55
UBE2D4-209ENST00000454428 NME9Q86XW9 330 aa24.74■■□□□ 1.55
UBE2D4-209ENST00000454428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.74■■□□□ 1.55
UBE2D4-209ENST00000454428 SBNO2Q9Y2G9 1366 aa24.73■■□□□ 1.55
UBE2D4-209ENST00000454428 GIGYF1O75420 1035 aaPredicted RBP24.73■■□□□ 1.55
UBE2D4-209ENST00000454428 ANKRD24Q8TF21 1146 aa24.73■■□□□ 1.55
UBE2D4-209ENST00000454428 SLC16A10Q8TF71 515 aa24.73■■□□□ 1.55
UBE2D4-209ENST00000454428 NLGN2Q8NFZ4 835 aa24.72■■□□□ 1.55
UBE2D4-209ENST00000454428 IFFO2Q5TF58 517 aa24.71■■□□□ 1.55
UBE2D4-209ENST00000454428 LY75O60449 1722 aa24.7■■□□□ 1.54
UBE2D4-209ENST00000454428 KCNQ4P56696 695 aa24.7■■□□□ 1.54
UBE2D4-209ENST00000454428 SLC27A3Q5K4L6 730 aa24.7■■□□□ 1.54
UBE2D4-209ENST00000454428 KLHL34Q8N239 644 aa24.7■■□□□ 1.54
UBE2D4-209ENST00000454428 ROCK2O75116 1388 aaKnown RBP24.69■■□□□ 1.54
UBE2D4-209ENST00000454428 POLD1P28340 1107 aa24.68■■□□□ 1.54
UBE2D4-209ENST00000454428 YBX3P16989 372 aaKnown RBP eCLIP24.67■■□□□ 1.54
UBE2D4-209ENST00000454428 PELP1Q8IZL8 1130 aaKnown RBP24.67■■□□□ 1.54
UBE2D4-209ENST00000454428 NSD2O96028 1365 aa24.67■■□□□ 1.54
UBE2D4-209ENST00000454428 DOT1LQ8TEK3 1739 aa24.66■■□□□ 1.54
UBE2D4-209ENST00000454428 DDX54Q8TDD1 881 aaKnown RBP24.65■■□□□ 1.54
UBE2D4-209ENST00000454428 TFCP2L1Q9NZI6 479 aa24.65■■□□□ 1.54
UBE2D4-209ENST00000454428 FAM208AQ9UK61 1670 aaKnown RBP24.64■■□□□ 1.53
UBE2D4-209ENST00000454428 PRIM1P49642 420 aaKnown RBP24.62■■□□□ 1.53
UBE2D4-209ENST00000454428 ANKRD36BQ8N2N9 1353 aa24.62■■□□□ 1.53
UBE2D4-209ENST00000454428 SIN3AQ96ST3 1273 aa24.61■■□□□ 1.53
UBE2D4-209ENST00000454428 EDC4Q6P2E9 1401 aaKnown RBP24.61■■□□□ 1.53
UBE2D4-209ENST00000454428 IP6K1Q92551 441 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms