RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ABCC6O95255 1503 aa20.63■□□□□ 0.89
LYSMD3-202ENST00000453259 CPSF1Q10570 1443 aaKnown RBP20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 WNK3Q9BYP7 1800 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 EVC2Q86UK5 1308 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 TOM1L2Q6ZVM7 507 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 ZNF692Q9BU19 519 aaPredicted RBP20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 COL18A1P39060 1754 aa20.62■□□□□ 0.89
LYSMD3-202ENST00000453259 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
LYSMD3-202ENST00000453259 TRPM1Q7Z4N2 1603 aa20.6■□□□□ 0.89
LYSMD3-202ENST00000453259 TTC21AQ8NDW8 1320 aa20.59■□□□□ 0.89
LYSMD3-202ENST00000453259 CASZ1Q86V15 1759 aa20.59■□□□□ 0.89
LYSMD3-202ENST00000453259 AKAP12Q02952 1782 aa20.58■□□□□ 0.89
LYSMD3-202ENST00000453259 ARHGEF25Q86VW2 580 aa20.57■□□□□ 0.88
LYSMD3-202ENST00000453259 CARD10Q9BWT7 1032 aa20.57■□□□□ 0.88
LYSMD3-202ENST00000453259 CCDC7Q96M83 1385 aa20.56■□□□□ 0.88
LYSMD3-202ENST00000453259 ZBTB7CA1YPR0 619 aa20.55■□□□□ 0.88
LYSMD3-202ENST00000453259 MARCH10Q8NA82 808 aaPredicted RBP20.54■□□□□ 0.88
LYSMD3-202ENST00000453259 AXIN2Q9Y2T1 843 aa20.54■□□□□ 0.88
LYSMD3-202ENST00000453259 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
LYSMD3-202ENST00000453259 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
LYSMD3-202ENST00000453259 NFAT5O94916 1531 aa20.52■□□□□ 0.87
LYSMD3-202ENST00000453259 TNS2Q63HR2 1409 aa20.52■□□□□ 0.87
LYSMD3-202ENST00000453259 EXOC5O00471 708 aa20.51■□□□□ 0.87
LYSMD3-202ENST00000453259 CSB-PGBD3P0DP91 1061 aa20.5■□□□□ 0.87
LYSMD3-202ENST00000453259 PROM2Q8N271 834 aa20.5■□□□□ 0.87
LYSMD3-202ENST00000453259 STK32BQ9NY57 414 aa20.5■□□□□ 0.87
LYSMD3-202ENST00000453259 SBNO2Q9Y2G9 1366 aa20.49■□□□□ 0.87
LYSMD3-202ENST00000453259 USP54Q70EL1 1684 aa20.48■□□□□ 0.87
LYSMD3-202ENST00000453259 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
LYSMD3-202ENST00000453259 L3MBTL2Q969R5 705 aa20.48■□□□□ 0.87
LYSMD3-202ENST00000453259 ROCK2O75116 1388 aaKnown RBP20.47■□□□□ 0.87
LYSMD3-202ENST00000453259 KTN1Q86UP2 1357 aaKnown RBP20.47■□□□□ 0.87
LYSMD3-202ENST00000453259 SLC15A2Q16348 729 aa20.47■□□□□ 0.87
LYSMD3-202ENST00000453259 NHSQ6T4R5 1651 aa20.47■□□□□ 0.87
LYSMD3-202ENST00000453259 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
LYSMD3-202ENST00000453259 PTGER2P43116 358 aa20.46■□□□□ 0.87
LYSMD3-202ENST00000453259 MTFR1LQ9H019 292 aa20.46■□□□□ 0.87
LYSMD3-202ENST00000453259 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
LYSMD3-202ENST00000453259 MYOM1P52179 1685 aa20.45■□□□□ 0.86
LYSMD3-202ENST00000453259 RGPD5Q99666 1765 aa20.45■□□□□ 0.86
LYSMD3-202ENST00000453259 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
LYSMD3-202ENST00000453259 ZBTB7AO95365 584 aa20.43■□□□□ 0.86
LYSMD3-202ENST00000453259 ERBB3P21860 1342 aa20.43■□□□□ 0.86
LYSMD3-202ENST00000453259 MAP3K5Q99683 1374 aa20.43■□□□□ 0.86
LYSMD3-202ENST00000453259 SOX12O15370 315 aa20.4■□□□□ 0.86
LYSMD3-202ENST00000453259 PAPPAQ13219 1627 aa20.4■□□□□ 0.86
LYSMD3-202ENST00000453259 PDGFDQ9GZP0 370 aaPredicted RBP20.4■□□□□ 0.86
LYSMD3-202ENST00000453259 IL2RBP14784 551 aa20.39■□□□□ 0.85
LYSMD3-202ENST00000453259 SGIP1Q9BQI5 828 aa20.39■□□□□ 0.85
LYSMD3-202ENST00000453259 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
LYSMD3-202ENST00000453259 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
LYSMD3-202ENST00000453259 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
LYSMD3-202ENST00000453259 EDC4Q6P2E9 1401 aaKnown RBP20.36■□□□□ 0.85
LYSMD3-202ENST00000453259 NLRP2Q9NX02 1062 aa20.36■□□□□ 0.85
LYSMD3-202ENST00000453259 LTN1O94822 1766 aa20.36■□□□□ 0.85
LYSMD3-202ENST00000453259 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
LYSMD3-202ENST00000453259 PUS7Q96PZ0 661 aaKnown RBP20.35■□□□□ 0.85
LYSMD3-202ENST00000453259 CD163L1Q9NR16 1453 aa20.35■□□□□ 0.85
LYSMD3-202ENST00000453259 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
LYSMD3-202ENST00000453259 ZNF784Q8NCA9 323 aaPredicted RBP20.34■□□□□ 0.85
LYSMD3-202ENST00000453259 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
LYSMD3-202ENST00000453259 ARXQ96QS3 562 aa20.34■□□□□ 0.85
LYSMD3-202ENST00000453259 BTAF1O14981 1849 aa20.34■□□□□ 0.85
LYSMD3-202ENST00000453259 SLC27A3Q5K4L6 730 aa20.33■□□□□ 0.85
LYSMD3-202ENST00000453259 TERF2IPQ9NYB0 399 aa20.33■□□□□ 0.85
LYSMD3-202ENST00000453259 CHD4Q14839 1912 aa20.33■□□□□ 0.84
LYSMD3-202ENST00000453259 QSER1Q2KHR3 1735 aa20.33■□□□□ 0.84
LYSMD3-202ENST00000453259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
LYSMD3-202ENST00000453259 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
LYSMD3-202ENST00000453259 NME9Q86XW9 330 aa20.3■□□□□ 0.84
LYSMD3-202ENST00000453259 ACSBG1Q96GR2 724 aa20.3■□□□□ 0.84
LYSMD3-202ENST00000453259 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
LYSMD3-202ENST00000453259 SLC24A1O60721 1099 aa20.28■□□□□ 0.84
LYSMD3-202ENST00000453259 IP6K1Q92551 441 aa20.27■□□□□ 0.84
LYSMD3-202ENST00000453259 CARD11Q9BXL7 1154 aa20.27■□□□□ 0.84
LYSMD3-202ENST00000453259 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
LYSMD3-202ENST00000453259 UTRNP46939 3433 aa20.27■□□□□ 0.83
LYSMD3-202ENST00000453259 A0A1W2PP64 1363 aa20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 HMGB2P26583 209 aaKnown RBP20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 POLD1P28340 1107 aa20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 AKT1S1Q96B36 256 aa20.26■□□□□ 0.83
LYSMD3-202ENST00000453259 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
LYSMD3-202ENST00000453259 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
LYSMD3-202ENST00000453259 LRRC4BQ9NT99 713 aa20.25■□□□□ 0.83
LYSMD3-202ENST00000453259 ANKRD36BQ8N2N9 1353 aa20.24■□□□□ 0.83
LYSMD3-202ENST00000453259 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
LYSMD3-202ENST00000453259 CGNL1Q0VF96 1302 aa20.21■□□□□ 0.83
LYSMD3-202ENST00000453259 RTL1A6NKG5 1358 aa20.21■□□□□ 0.83
LYSMD3-202ENST00000453259 C1QTNF8P60827 252 aa20.2■□□□□ 0.82
LYSMD3-202ENST00000453259 GPR162Q16538 588 aa20.2■□□□□ 0.82
LYSMD3-202ENST00000453259 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
LYSMD3-202ENST00000453259 LY75O60449 1722 aa20.19■□□□□ 0.82
LYSMD3-202ENST00000453259 DDX54Q8TDD1 881 aaKnown RBP20.19■□□□□ 0.82
LYSMD3-202ENST00000453259 COG3Q96JB2 828 aa20.19■□□□□ 0.82
LYSMD3-202ENST00000453259 TFCP2L1Q9NZI6 479 aa20.19■□□□□ 0.82
LYSMD3-202ENST00000453259 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
LYSMD3-202ENST00000453259 DOT1LQ8TEK3 1739 aa20.17■□□□□ 0.82
LYSMD3-202ENST00000453259 HOXC9P31274 260 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms