RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 PEAK1Q9H792 1746 aa28.02■■■□□ 2.08
NPAS1-202ENST00000449844 FRAT1Q92837 279 aaPredicted RBP28.02■■■□□ 2.08
NPAS1-202ENST00000449844 NOP58Q9Y2X3 529 aaKnown RBP28.02■■■□□ 2.08
NPAS1-202ENST00000449844 PANK1Q8TE04 598 aa28.01■■■□□ 2.07
NPAS1-202ENST00000449844 CLUAP1Q96AJ1 413 aa28.01■■■□□ 2.07
NPAS1-202ENST00000449844 NEFMP07197 916 aa28.01■■■□□ 2.07
NPAS1-202ENST00000449844 PRKAR2BP31323 418 aa28■■■□□ 2.07
NPAS1-202ENST00000449844 RIPK4P57078 832 aa28■■■□□ 2.07
NPAS1-202ENST00000449844 COG6Q9Y2V7 657 aa28■■■□□ 2.07
NPAS1-202ENST00000449844 SOX12O15370 315 aa27.99■■■□□ 2.07
NPAS1-202ENST00000449844 MARF1Q9Y4F3 1742 aaKnown RBP27.99■■■□□ 2.07
NPAS1-202ENST00000449844 HMOX1P09601 288 aa27.99■■■□□ 2.07
NPAS1-202ENST00000449844 ESCO1Q5FWF5 840 aa27.98■■■□□ 2.07
NPAS1-202ENST00000449844 SKAP1Q86WV1 359 aa27.98■■■□□ 2.07
NPAS1-202ENST00000449844 HSPA2P54652 639 aa27.97■■■□□ 2.07
NPAS1-202ENST00000449844 KDM4FA0A1W2PPD8 638 aa27.97■■■□□ 2.07
NPAS1-202ENST00000449844 NLRP6P59044 892 aa27.97■■■□□ 2.07
NPAS1-202ENST00000449844 PAK3O75914 559 aaPredicted RBP27.96■■■□□ 2.07
NPAS1-202ENST00000449844 STRCP1A6NGW2 1772 aa27.96■■■□□ 2.07
NPAS1-202ENST00000449844 TSR2Q969E8 191 aaKnown RBP27.95■■■□□ 2.06
NPAS1-202ENST00000449844 EIF4A2Q14240 407 aaKnown RBP27.94■■■□□ 2.06
NPAS1-202ENST00000449844 ABTB2Q8N961 1025 aa27.94■■■□□ 2.06
NPAS1-202ENST00000449844 MAP3K19Q56UN5 1328 aa27.93■■■□□ 2.06
NPAS1-202ENST00000449844 EXOSC9Q06265 439 aaKnown RBP27.93■■■□□ 2.06
NPAS1-202ENST00000449844 BCL2L13Q9BXK5 485 aa27.92■■■□□ 2.06
NPAS1-202ENST00000449844 SBNO1A3KN83 1393 aa27.92■■■□□ 2.06
NPAS1-202ENST00000449844 ZKSCAN2Q63HK3 967 aa27.92■■■□□ 2.06
NPAS1-202ENST00000449844 IGHDP01880 384 aa27.91■■■□□ 2.06
NPAS1-202ENST00000449844 NUTM2GQ5VZR2 741 aa27.91■■■□□ 2.06
NPAS1-202ENST00000449844 LMTK3Q96Q04 1460 aa27.91■■■□□ 2.06
NPAS1-202ENST00000449844 FLT4P35916 1363 aa27.91■■■□□ 2.06
NPAS1-202ENST00000449844 RLBP1P12271 317 aa27.91■■■□□ 2.06
NPAS1-202ENST00000449844 RGPD1P0DJD0 1748 aa27.9■■■□□ 2.06
NPAS1-202ENST00000449844 PSME1Q06323 249 aa27.9■■■□□ 2.06
NPAS1-202ENST00000449844 HSP90AB2PQ58FF8 381 aa27.9■■■□□ 2.06
NPAS1-202ENST00000449844 ZBTB47Q9UFB7 747 aaPredicted RBP27.9■■■□□ 2.06
NPAS1-202ENST00000449844 NFE2L2Q16236 605 aa27.89■■■□□ 2.06
NPAS1-202ENST00000449844 C19orf44Q9H6X5 657 aa27.89■■■□□ 2.06
NPAS1-202ENST00000449844 KIF1AQ12756 1690 aa27.89■■■□□ 2.06
NPAS1-202ENST00000449844 FAM161AQ3B820 660 aa27.89■■■□□ 2.05
NPAS1-202ENST00000449844 PHACTR3Q96KR7 559 aa27.88■■■□□ 2.05
NPAS1-202ENST00000449844 AMPHP49418 695 aa27.87■■■□□ 2.05
NPAS1-202ENST00000449844 ORAI2Q96SN7 254 aa27.87■■■□□ 2.05
NPAS1-202ENST00000449844 TMEM94Q12767 1356 aa27.87■■■□□ 2.05
NPAS1-202ENST00000449844 NPM2Q86SE8 214 aaKnown RBP27.87■■■□□ 2.05
NPAS1-202ENST00000449844 SMC4Q9NTJ3 1288 aa27.87■■■□□ 2.05
NPAS1-202ENST00000449844 TNNQ9UQP3 1299 aa27.87■■■□□ 2.05
NPAS1-202ENST00000449844 DLG5Q8TDM6 1919 aa27.86■■■□□ 2.05
NPAS1-202ENST00000449844 C1orf167Q5SNV9 1468 aa27.86■■■□□ 2.05
NPAS1-202ENST00000449844 CALD1Q05682 793 aaKnown RBP27.85■■■□□ 2.05
NPAS1-202ENST00000449844 MVPQ14764 893 aaKnown RBP27.85■■■□□ 2.05
NPAS1-202ENST00000449844 DZIP1LQ8IYY4 767 aaKnown RBP27.85■■■□□ 2.05
NPAS1-202ENST00000449844 STRCQ7RTU9 1775 aa27.85■■■□□ 2.05
NPAS1-202ENST00000449844 NCOA3Q9Y6Q9 1424 aa27.85■■■□□ 2.05
NPAS1-202ENST00000449844 SULT6B1Q6IMI4 303 aa27.84■■■□□ 2.05
NPAS1-202ENST00000449844 KIF24Q5T7B8 1368 aa27.83■■■□□ 2.05
NPAS1-202ENST00000449844 DCCP43146 1447 aa27.83■■■□□ 2.05
NPAS1-202ENST00000449844 RGS3P49796 1198 aa27.83■■■□□ 2.05
NPAS1-202ENST00000449844 FTSJ3Q8IY81 847 aaKnown RBP27.83■■■□□ 2.05
NPAS1-202ENST00000449844 SSH1Q8WYL5 1049 aa27.83■■■□□ 2.05
NPAS1-202ENST00000449844 LTN1O94822 1766 aa27.82■■■□□ 2.04
NPAS1-202ENST00000449844 ZNF428Q96B54 188 aa27.82■■■□□ 2.04
NPAS1-202ENST00000449844 ARHGEF10O15013 1369 aa27.82■■■□□ 2.04
NPAS1-202ENST00000449844 C8orf34Q49A92 452 aa27.82■■■□□ 2.04
NPAS1-202ENST00000449844 AEBP1Q8IUX7 1158 aa27.82■■■□□ 2.04
NPAS1-202ENST00000449844 FOXO3O43524 673 aa27.81■■■□□ 2.04
NPAS1-202ENST00000449844 ATF3P18847 181 aa27.81■■■□□ 2.04
NPAS1-202ENST00000449844 ALDH1L2Q3SY69 923 aa27.81■■■□□ 2.04
NPAS1-202ENST00000449844 PCDHB15Q9Y5E8 787 aa27.8■■■□□ 2.04
NPAS1-202ENST00000449844 TRPM3Q9HCF6 1732 aaPredicted RBP27.8■■■□□ 2.04
NPAS1-202ENST00000449844 LMOD3Q0VAK6 560 aa27.79■■■□□ 2.04
NPAS1-202ENST00000449844 KIF16BQ96L93 1317 aa27.79■■■□□ 2.04
NPAS1-202ENST00000449844 MST1RQ04912 1400 aa27.79■■■□□ 2.04
NPAS1-202ENST00000449844 ATF7IPQ6VMQ6 1270 aa27.79■■■□□ 2.04
NPAS1-202ENST00000449844 RWDD1Q9H446 243 aaPredicted RBP27.78■■■□□ 2.04
NPAS1-202ENST00000449844 NFAT5O94916 1531 aa27.78■■■□□ 2.04
NPAS1-202ENST00000449844 TRIM27P14373 513 aa27.77■■■□□ 2.04
NPAS1-202ENST00000449844 HOXC9P31274 260 aa27.77■■■□□ 2.04
NPAS1-202ENST00000449844 RTL1A6NKG5 1358 aa27.77■■■□□ 2.04
NPAS1-202ENST00000449844 IPO8O15397 1037 aaKnown RBP27.77■■■□□ 2.04
NPAS1-202ENST00000449844 XPCQ01831 940 aaPredicted RBP27.77■■■□□ 2.04
NPAS1-202ENST00000449844 DDRGK1Q96HY6 314 aa27.77■■■□□ 2.04
NPAS1-202ENST00000449844 GNAI1P63096 354 aa27.76■■■□□ 2.03
NPAS1-202ENST00000449844 IFT57Q9NWB7 429 aa27.76■■■□□ 2.03
NPAS1-202ENST00000449844 BRPF1P55201 1214 aaPredicted RBP27.75■■■□□ 2.03
NPAS1-202ENST00000449844 NOB1Q9ULX3 412 aaKnown RBP27.75■■■□□ 2.03
NPAS1-202ENST00000449844 DDX19BQ9UMR2 479 aa27.75■■■□□ 2.03
NPAS1-202ENST00000449844 XIRP1Q702N8 1843 aaKnown RBP27.74■■■□□ 2.03
NPAS1-202ENST00000449844 KCNH5Q8NCM2 988 aa27.74■■■□□ 2.03
NPAS1-202ENST00000449844 KRT28Q7Z3Y7 464 aa27.73■■■□□ 2.03
NPAS1-202ENST00000449844 MSH6P52701 1360 aa27.73■■■□□ 2.03
NPAS1-202ENST00000449844 IGSF1Q8N6C5 1336 aa27.72■■■□□ 2.03
NPAS1-202ENST00000449844 ZNF853P0CG23 659 aa27.72■■■□□ 2.03
NPAS1-202ENST00000449844 CADPS2Q86UW7 1296 aa27.72■■■□□ 2.03
NPAS1-202ENST00000449844 SLIT3O75094 1523 aa27.71■■■□□ 2.03
NPAS1-202ENST00000449844 EYA1Q99502 592 aa27.71■■■□□ 2.03
NPAS1-202ENST00000449844 THUMPD2Q9BTF0 503 aaKnown RBP27.71■■■□□ 2.03
NPAS1-202ENST00000449844 KDRP35968 1356 aa27.71■■■□□ 2.03
NPAS1-202ENST00000449844 LAS1LQ9Y4W2 734 aaKnown RBP27.7■■■□□ 2.03
NPAS1-202ENST00000449844 PHRF1Q9P1Y6 1649 aaKnown RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms