RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 NEFMP07197 916 aa20.82■□□□□ 0.92
AP000253.1-201ENST00000449339 RARSP54136 660 aaKnown RBP20.82■□□□□ 0.92
AP000253.1-201ENST00000449339 ORAI2Q96SN7 254 aa20.81■□□□□ 0.92
AP000253.1-201ENST00000449339 PDE3AQ14432 1141 aa20.81■□□□□ 0.92
AP000253.1-201ENST00000449339 KDM4FA0A1W2PPD8 638 aa20.8■□□□□ 0.92
AP000253.1-201ENST00000449339 TCERG1O14776 1098 aaKnown RBP20.8■□□□□ 0.92
AP000253.1-201ENST00000449339 NFE2L2Q16236 605 aa20.8■□□□□ 0.92
AP000253.1-201ENST00000449339 STRCP1A6NGW2 1772 aa20.8■□□□□ 0.92
AP000253.1-201ENST00000449339 CANXP27824 592 aaKnown RBP20.8■□□□□ 0.92
AP000253.1-201ENST00000449339 KDM2BQ8NHM5 1336 aa20.79■□□□□ 0.92
AP000253.1-201ENST00000449339 SULT6B1Q6IMI4 303 aa20.79■□□□□ 0.92
AP000253.1-201ENST00000449339 THUMPD2Q9BTF0 503 aaKnown RBP20.78■□□□□ 0.92
AP000253.1-201ENST00000449339 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
AP000253.1-201ENST00000449339 PSME1Q06323 249 aa20.78■□□□□ 0.92
AP000253.1-201ENST00000449339 AMPHP49418 695 aa20.77■□□□□ 0.92
AP000253.1-201ENST00000449339 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
AP000253.1-201ENST00000449339 SBNO1A3KN83 1393 aa20.77■□□□□ 0.92
AP000253.1-201ENST00000449339 CENPQQ7L2Z9 268 aaPredicted RBP20.77■□□□□ 0.91
AP000253.1-201ENST00000449339 FRAT1Q92837 279 aaPredicted RBP20.77■□□□□ 0.91
AP000253.1-201ENST00000449339 BCL2L13Q9BXK5 485 aa20.77■□□□□ 0.91
AP000253.1-201ENST00000449339 USP54Q70EL1 1684 aa20.76■□□□□ 0.91
AP000253.1-201ENST00000449339 RGPD1P0DJD0 1748 aa20.76■□□□□ 0.91
AP000253.1-201ENST00000449339 EXOSC9Q06265 439 aaKnown RBP20.76■□□□□ 0.91
AP000253.1-201ENST00000449339 FLT4P35916 1363 aa20.76■□□□□ 0.91
AP000253.1-201ENST00000449339 FOXO3O43524 673 aa20.76■□□□□ 0.91
AP000253.1-201ENST00000449339 IL16Q14005 1332 aa20.76■□□□□ 0.91
AP000253.1-201ENST00000449339 CT47B1P0C2W7 299 aaPredicted RBP20.74■□□□□ 0.91
AP000253.1-201ENST00000449339 PANK1Q8TE04 598 aa20.74■□□□□ 0.91
AP000253.1-201ENST00000449339 MS4A1P11836 297 aa20.73■□□□□ 0.91
AP000253.1-201ENST00000449339 LAS1LQ9Y4W2 734 aaKnown RBP20.73■□□□□ 0.91
AP000253.1-201ENST00000449339 TMEM94Q12767 1356 aa20.73■□□□□ 0.91
AP000253.1-201ENST00000449339 C19orf44Q9H6X5 657 aa20.73■□□□□ 0.91
AP000253.1-201ENST00000449339 FAM83GA6ND36 823 aa20.72■□□□□ 0.91
AP000253.1-201ENST00000449339 MSH5O43196 834 aa20.72■□□□□ 0.91
AP000253.1-201ENST00000449339 PLEKHG5O94827 1062 aa20.72■□□□□ 0.91
AP000253.1-201ENST00000449339 COG6Q9Y2V7 657 aa20.72■□□□□ 0.91
AP000253.1-201ENST00000449339 HOXC9P31274 260 aa20.71■□□□□ 0.91
AP000253.1-201ENST00000449339 C1orf167Q5SNV9 1468 aa20.71■□□□□ 0.91
AP000253.1-201ENST00000449339 DCTN1Q14203 1278 aa20.7■□□□□ 0.9
AP000253.1-201ENST00000449339 SKAP1Q86WV1 359 aa20.7■□□□□ 0.9
AP000253.1-201ENST00000449339 TNNQ9UQP3 1299 aa20.7■□□□□ 0.9
AP000253.1-201ENST00000449339 LMTK3Q96Q04 1460 aa20.7■□□□□ 0.9
AP000253.1-201ENST00000449339 EYA1Q99502 592 aa20.69■□□□□ 0.9
AP000253.1-201ENST00000449339 LTN1O94822 1766 aa20.69■□□□□ 0.9
AP000253.1-201ENST00000449339 ARHGEF10O15013 1369 aa20.69■□□□□ 0.9
AP000253.1-201ENST00000449339 CLUAP1Q96AJ1 413 aa20.68■□□□□ 0.9
AP000253.1-201ENST00000449339 LTV1Q96GA3 475 aaPredicted RBP20.68■□□□□ 0.9
AP000253.1-201ENST00000449339 PDE4AP27815 886 aa20.67■□□□□ 0.9
AP000253.1-201ENST00000449339 STRCQ7RTU9 1775 aa20.67■□□□□ 0.9
AP000253.1-201ENST00000449339 RLBP1P12271 317 aa20.66■□□□□ 0.9
AP000253.1-201ENST00000449339 ATF3P18847 181 aa20.66■□□□□ 0.9
AP000253.1-201ENST00000449339 LMOD2Q6P5Q4 547 aa20.66■□□□□ 0.9
AP000253.1-201ENST00000449339 NFAT5O94916 1531 aa20.66■□□□□ 0.9
AP000253.1-201ENST00000449339 ZBTB7CA1YPR0 619 aa20.66■□□□□ 0.9
AP000253.1-201ENST00000449339 IGSF1Q8N6C5 1336 aa20.66■□□□□ 0.9
AP000253.1-201ENST00000449339 LMOD3Q0VAK6 560 aa20.65■□□□□ 0.9
AP000253.1-201ENST00000449339 KRT28Q7Z3Y7 464 aa20.65■□□□□ 0.9
AP000253.1-201ENST00000449339 TRPM3Q9HCF6 1732 aaPredicted RBP20.65■□□□□ 0.9
AP000253.1-201ENST00000449339 MST1RQ04912 1400 aa20.65■□□□□ 0.9
AP000253.1-201ENST00000449339 SSH1Q8WYL5 1049 aa20.65■□□□□ 0.9
AP000253.1-201ENST00000449339 DDX17Q92841 729 aaKnown RBP20.65■□□□□ 0.9
AP000253.1-201ENST00000449339 BACH2Q9BYV9 841 aa20.65■□□□□ 0.9
AP000253.1-201ENST00000449339 SMC4Q9NTJ3 1288 aa20.65■□□□□ 0.9
AP000253.1-201ENST00000449339 AAMPQ13685 434 aa20.64■□□□□ 0.89
AP000253.1-201ENST00000449339 KIF1AQ12756 1690 aa20.64■□□□□ 0.89
AP000253.1-201ENST00000449339 ZNF853P0CG23 659 aa20.63■□□□□ 0.89
AP000253.1-201ENST00000449339 CALD1Q05682 793 aaKnown RBP20.63■□□□□ 0.89
AP000253.1-201ENST00000449339 ZKSCAN2Q63HK3 967 aa20.63■□□□□ 0.89
AP000253.1-201ENST00000449339 MBIPQ9NS73 344 aa20.63■□□□□ 0.89
AP000253.1-201ENST00000449339 IFT57Q9NWB7 429 aa20.63■□□□□ 0.89
AP000253.1-201ENST00000449339 KIF24Q5T7B8 1368 aa20.63■□□□□ 0.89
AP000253.1-201ENST00000449339 KDRP35968 1356 aa20.63■□□□□ 0.89
AP000253.1-201ENST00000449339 GNAI1P63096 354 aa20.62■□□□□ 0.89
AP000253.1-201ENST00000449339 MCM10Q7L590 875 aa20.62■□□□□ 0.89
AP000253.1-201ENST00000449339 IGHDP01880 384 aa20.62■□□□□ 0.89
AP000253.1-201ENST00000449339 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
AP000253.1-201ENST00000449339 XIRP1Q702N8 1843 aaKnown RBP20.61■□□□□ 0.89
AP000253.1-201ENST00000449339 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
AP000253.1-201ENST00000449339 USHBP1Q8N6Y0 703 aa20.61■□□□□ 0.89
AP000253.1-201ENST00000449339 TSPYL6Q8N831 410 aa20.61■□□□□ 0.89
AP000253.1-201ENST00000449339 ANP32EQ9BTT0 268 aa20.61■□□□□ 0.89
AP000253.1-201ENST00000449339 RTL1A6NKG5 1358 aa20.6■□□□□ 0.89
AP000253.1-201ENST00000449339 FTSJ3Q8IY81 847 aaKnown RBP20.6■□□□□ 0.89
AP000253.1-201ENST00000449339 IP6K1Q92551 441 aa20.6■□□□□ 0.89
AP000253.1-201ENST00000449339 CFAP44Q96MT7 982 aa20.6■□□□□ 0.89
AP000253.1-201ENST00000449339 DZIP1LQ8IYY4 767 aaKnown RBP20.59■□□□□ 0.89
AP000253.1-201ENST00000449339 KCNH5Q8NCM2 988 aa20.59■□□□□ 0.89
AP000253.1-201ENST00000449339 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
AP000253.1-201ENST00000449339 GCP02774 474 aa20.59■□□□□ 0.89
AP000253.1-201ENST00000449339 DCCP43146 1447 aa20.59■□□□□ 0.89
AP000253.1-201ENST00000449339 MVPQ14764 893 aaKnown RBP20.58■□□□□ 0.89
AP000253.1-201ENST00000449339 NCOA3Q9Y6Q9 1424 aa20.58■□□□□ 0.89
AP000253.1-201ENST00000449339 TRIM27P14373 513 aa20.58■□□□□ 0.88
AP000253.1-201ENST00000449339 SLIT3O75094 1523 aa20.57■□□□□ 0.88
AP000253.1-201ENST00000449339 NOB1Q9ULX3 412 aaKnown RBP20.57■□□□□ 0.88
AP000253.1-201ENST00000449339 VAMP4O75379 141 aa20.57■□□□□ 0.88
AP000253.1-201ENST00000449339 CADPS2Q86UW7 1296 aa20.57■□□□□ 0.88
AP000253.1-201ENST00000449339 RGPD2P0DJD1 1756 aa20.56■□□□□ 0.88
AP000253.1-201ENST00000449339 MSH6P52701 1360 aa20.56■□□□□ 0.88
AP000253.1-201ENST00000449339 ZNF335Q9H4Z2 1342 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms