RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 AKAP12Q02952 1782 aa20.42■□□□□ 0.86
USP39-206ENST00000448971 NBPF14Q5TI25 921 aa20.42■□□□□ 0.86
USP39-206ENST00000448971 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
USP39-206ENST00000448971 TMC1Q8TDI8 760 aa20.4■□□□□ 0.86
USP39-206ENST00000448971 PARP4Q9UKK3 1724 aaKnown RBP20.4■□□□□ 0.86
USP39-206ENST00000448971 CRB1P82279 1406 aa20.39■□□□□ 0.85
USP39-206ENST00000448971 AATKQ6ZMQ8 1374 aa20.39■□□□□ 0.85
USP39-206ENST00000448971 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.85
USP39-206ENST00000448971 NLRP6P59044 892 aa20.39■□□□□ 0.85
USP39-206ENST00000448971 TMF1P82094 1093 aa20.39■□□□□ 0.85
USP39-206ENST00000448971 MON2Q7Z3U7 1717 aa20.39■□□□□ 0.85
USP39-206ENST00000448971 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
USP39-206ENST00000448971 KTN1Q86UP2 1357 aaKnown RBP20.37■□□□□ 0.85
USP39-206ENST00000448971 PLSCR1O15162 318 aa20.37■□□□□ 0.85
USP39-206ENST00000448971 AXIN2Q9Y2T1 843 aa20.37■□□□□ 0.85
USP39-206ENST00000448971 PEAK1Q9H792 1746 aa20.36■□□□□ 0.85
USP39-206ENST00000448971 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
USP39-206ENST00000448971 PIK3C2AO00443 1686 aa20.36■□□□□ 0.85
USP39-206ENST00000448971 KCNQ2O43526 872 aa20.35■□□□□ 0.85
USP39-206ENST00000448971 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
USP39-206ENST00000448971 PUS7Q96PZ0 661 aaKnown RBP20.35■□□□□ 0.85
USP39-206ENST00000448971 ZNF692Q9BU19 519 aaPredicted RBP20.35■□□□□ 0.85
USP39-206ENST00000448971 SPON1Q9HCB6 807 aa20.35■□□□□ 0.85
USP39-206ENST00000448971 SLIT3O75094 1523 aa20.35■□□□□ 0.85
USP39-206ENST00000448971 COL18A1P39060 1754 aa20.35■□□□□ 0.85
USP39-206ENST00000448971 SBF2Q86WG5 1849 aa20.34■□□□□ 0.85
USP39-206ENST00000448971 PTF1AQ7RTS3 328 aa20.34■□□□□ 0.85
USP39-206ENST00000448971 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
USP39-206ENST00000448971 OVOS2A0A0G2JMS6 1433 aa20.34■□□□□ 0.85
USP39-206ENST00000448971 OVOS2A0A0J9YW53 1432 aa20.34■□□□□ 0.85
USP39-206ENST00000448971 OVOS2Q6IE36 1432 aa20.34■□□□□ 0.85
USP39-206ENST00000448971 A0A1W2PP64 1363 aa20.34■□□□□ 0.85
USP39-206ENST00000448971 ZBTB7CA1YPR0 619 aa20.33■□□□□ 0.85
USP39-206ENST00000448971 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.85
USP39-206ENST00000448971 DDB1Q16531 1140 aa20.33■□□□□ 0.85
USP39-206ENST00000448971 TTC21BQ7Z4L5 1316 aa20.32■□□□□ 0.84
USP39-206ENST00000448971 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
USP39-206ENST00000448971 TOM1L2Q6ZVM7 507 aa20.32■□□□□ 0.84
USP39-206ENST00000448971 PROM2Q8N271 834 aa20.32■□□□□ 0.84
USP39-206ENST00000448971 BCL11BQ9C0K0 894 aaPredicted RBP20.32■□□□□ 0.84
USP39-206ENST00000448971 SLC12A5Q9H2X9 1139 aa20.32■□□□□ 0.84
USP39-206ENST00000448971 TERF2IPQ9NYB0 399 aa20.32■□□□□ 0.84
USP39-206ENST00000448971 TTC21AQ8NDW8 1320 aa20.31■□□□□ 0.84
USP39-206ENST00000448971 ARHGEF25Q86VW2 580 aa20.31■□□□□ 0.84
USP39-206ENST00000448971 MARCH10Q8NA82 808 aaPredicted RBP20.31■□□□□ 0.84
USP39-206ENST00000448971 WDR17Q8IZU2 1322 aa20.3■□□□□ 0.84
USP39-206ENST00000448971 EDC4Q6P2E9 1401 aaKnown RBP20.3■□□□□ 0.84
USP39-206ENST00000448971 LRRC37A3O60309 1634 aa20.29■□□□□ 0.84
USP39-206ENST00000448971 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
USP39-206ENST00000448971 ANO8Q9HCE9 1232 aaPredicted RBP20.29■□□□□ 0.84
USP39-206ENST00000448971 RNF216Q9NWF9 866 aaPredicted RBP20.29■□□□□ 0.84
USP39-206ENST00000448971 RGPD3A6NKT7 1758 aaPredicted RBP20.29■□□□□ 0.84
USP39-206ENST00000448971 RGPD4Q7Z3J3 1758 aa20.29■□□□□ 0.84
USP39-206ENST00000448971 BCL9O00512 1426 aa20.28■□□□□ 0.84
USP39-206ENST00000448971 YY1P25490 414 aa20.28■□□□□ 0.84
USP39-206ENST00000448971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.28■□□□□ 0.84
USP39-206ENST00000448971 CDCA7Q9BWT1 371 aaPredicted RBP20.28■□□□□ 0.84
USP39-206ENST00000448971 PPP1R1BQ9UD71 204 aaPredicted RBP20.28■□□□□ 0.84
USP39-206ENST00000448971 MYOM1P52179 1685 aa20.28■□□□□ 0.84
USP39-206ENST00000448971 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.84
USP39-206ENST00000448971 PDGFDQ9GZP0 370 aaPredicted RBP20.27■□□□□ 0.84
USP39-206ENST00000448971 KCNH5Q8NCM2 988 aa20.26■□□□□ 0.83
USP39-206ENST00000448971 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
USP39-206ENST00000448971 CARD10Q9BWT7 1032 aa20.26■□□□□ 0.83
USP39-206ENST00000448971 RGPD5Q99666 1765 aa20.25■□□□□ 0.83
USP39-206ENST00000448971 UTRNP46939 3433 aa20.24■□□□□ 0.83
USP39-206ENST00000448971 USP54Q70EL1 1684 aa20.23■□□□□ 0.83
USP39-206ENST00000448971 SOX12O15370 315 aa20.23■□□□□ 0.83
USP39-206ENST00000448971 NME9Q86XW9 330 aa20.23■□□□□ 0.83
USP39-206ENST00000448971 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
USP39-206ENST00000448971 CASZ1Q86V15 1759 aa20.22■□□□□ 0.83
USP39-206ENST00000448971 EXOC5O00471 708 aa20.21■□□□□ 0.83
USP39-206ENST00000448971 TXNRD1Q16881 649 aa20.21■□□□□ 0.83
USP39-206ENST00000448971 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
USP39-206ENST00000448971 CSB-PGBD3P0DP91 1061 aa20.2■□□□□ 0.82
USP39-206ENST00000448971 PTGER2P43116 358 aa20.2■□□□□ 0.82
USP39-206ENST00000448971 NFAT5O94916 1531 aa20.19■□□□□ 0.82
USP39-206ENST00000448971 DCAF8L1A6NGE4 600 aa20.18■□□□□ 0.82
USP39-206ENST00000448971 ZBTB7AO95365 584 aa20.18■□□□□ 0.82
USP39-206ENST00000448971 SLC15A2Q16348 729 aa20.17■□□□□ 0.82
USP39-206ENST00000448971 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
USP39-206ENST00000448971 CCDC7Q96M83 1385 aa20.16■□□□□ 0.82
USP39-206ENST00000448971 NSD3Q9BZ95 1437 aa20.16■□□□□ 0.82
USP39-206ENST00000448971 KIF20BQ96Q89 1820 aa20.16■□□□□ 0.82
USP39-206ENST00000448971 STK32BQ9NY57 414 aa20.15■□□□□ 0.82
USP39-206ENST00000448971 COG3Q96JB2 828 aa20.14■□□□□ 0.81
USP39-206ENST00000448971 ABCC6O95255 1503 aa20.13■□□□□ 0.81
USP39-206ENST00000448971 SGIP1Q9BQI5 828 aa20.13■□□□□ 0.81
USP39-206ENST00000448971 LTN1O94822 1766 aa20.12■□□□□ 0.81
USP39-206ENST00000448971 TNS2Q63HR2 1409 aa20.11■□□□□ 0.81
USP39-206ENST00000448971 ERBB3P21860 1342 aa20.11■□□□□ 0.81
USP39-206ENST00000448971 KAT6BQ8WYB5 2073 aa20.11■□□□□ 0.81
USP39-206ENST00000448971 SYT17Q9BSW7 474 aa20.11■□□□□ 0.81
USP39-206ENST00000448971 ACSBG1Q96GR2 724 aa20.1■□□□□ 0.81
USP39-206ENST00000448971 MTFR1LQ9H019 292 aa20.1■□□□□ 0.81
USP39-206ENST00000448971 GGNBP2Q9H3C7 697 aa20.1■□□□□ 0.81
USP39-206ENST00000448971 HOXD11P31277 338 aaPredicted RBP20.09■□□□□ 0.81
USP39-206ENST00000448971 FHDC1Q9C0D6 1143 aaPredicted RBP20.09■□□□□ 0.81
USP39-206ENST00000448971 NLRP2Q9NX02 1062 aa20.09■□□□□ 0.81
USP39-206ENST00000448971 IL2RBP14784 551 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms