RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 ATP2B1P20020 1258 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 ZHX3Q9H4I2 956 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 SURF6O75683 361 aaKnown RBP7.29□□□□□ -1.24
PCDH15-219ENST00000448885 GNAI2P04899 355 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 CCDC112Q8NEF3 446 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 WASF1Q92558 559 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 SLC26A8Q96RN1 970 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 TNMDQ9H2S6 317 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 BMP2KQ9NSY1 1161 aaPredicted RBP7.29□□□□□ -1.24
PCDH15-219ENST00000448885 FAM177BA6PVY3 158 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 PRPF40AO75400 957 aaKnown RBP7.29□□□□□ -1.24
PCDH15-219ENST00000448885 RNF214Q8ND24 703 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 TATP17735 454 aaPredicted RBP7.29□□□□□ -1.24
PCDH15-219ENST00000448885 TAF4BQ92750 862 aa7.29□□□□□ -1.24
PCDH15-219ENST00000448885 MYOM3Q5VTT5 1437 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 RBM5P52756 815 aaKnown RBP eCLIP7.28□□□□□ -1.24
PCDH15-219ENST00000448885 TAX1BP1Q86VP1 789 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 PANK1Q8TE04 598 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 TRAK2O60296 914 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 CCDC97Q96F63 343 aaPredicted RBP7.28□□□□□ -1.24
PCDH15-219ENST00000448885 CEP57L1Q8IYX8 460 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 ZNF76P36508 570 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 CCT4P50991 539 aaKnown RBP7.28□□□□□ -1.24
PCDH15-219ENST00000448885 CEBPZQ03701 1054 aaKnown RBP7.28□□□□□ -1.24
PCDH15-219ENST00000448885 CCDC148Q8NFR7 591 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 FMNL2Q96PY5 1086 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 CEP131Q9UPN4 1083 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 KDM5BQ9UGL1 1544 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 USP8P40818 1118 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 NFKBIBQ15653 356 aa7.28□□□□□ -1.24
PCDH15-219ENST00000448885 SMTNL1A8MU46 457 aa7.27□□□□□ -1.24
PCDH15-219ENST00000448885 HMGB2P26583 209 aaKnown RBP7.27□□□□□ -1.24
PCDH15-219ENST00000448885 CABP4P57796 275 aa7.27□□□□□ -1.24
PCDH15-219ENST00000448885 SPC24Q8NBT2 197 aa7.27□□□□□ -1.24
PCDH15-219ENST00000448885 CABP2Q9NPB3 220 aa7.27□□□□□ -1.24
PCDH15-219ENST00000448885 BRD4O60885 1362 aaPredicted RBP7.27□□□□□ -1.25
PCDH15-219ENST00000448885 WDR33Q9C0J8 1336 aaKnown RBP7.27□□□□□ -1.25
PCDH15-219ENST00000448885 ZNF397Q8NF99 534 aaPredicted RBP7.27□□□□□ -1.25
PCDH15-219ENST00000448885 TNIP1Q15025 636 aa7.27□□□□□ -1.25
PCDH15-219ENST00000448885 NUTM2GQ5VZR2 741 aa7.27□□□□□ -1.25
PCDH15-219ENST00000448885 NUP133Q8WUM0 1156 aa7.27□□□□□ -1.25
PCDH15-219ENST00000448885 SPG7Q9UQ90 795 aa7.27□□□□□ -1.25
PCDH15-219ENST00000448885 STAMBPO95630 424 aa7.27□□□□□ -1.25
PCDH15-219ENST00000448885 NEK4P51957 841 aa7.27□□□□□ -1.25
PCDH15-219ENST00000448885 LRRCC1Q9C099 1032 aa7.27□□□□□ -1.25
PCDH15-219ENST00000448885 FAM193AP78312 1265 aa7.27□□□□□ -1.25
PCDH15-219ENST00000448885 ZSCAN31Q96LW9 406 aaPredicted RBP7.27□□□□□ -1.25
PCDH15-219ENST00000448885 ABCA10Q8WWZ4 1543 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 ME1P48163 572 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 NLRP6P59044 892 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 STK3Q13188 491 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 PPP4R3AQ6IN85 833 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 CENPHQ9H3R5 247 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 PRXQ9BXM0 1461 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 FIBPO43427 364 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 GGNBP2Q9H3C7 697 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 ERICH3Q5RHP9 1530 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 CADPSQ9ULU8 1353 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 CETN2P41208 172 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 SRCIN1Q9C0H9 1055 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 CCDC7Q96M83 1385 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 PPP1R12BO60237 982 aaPredicted RBP7.26□□□□□ -1.25
PCDH15-219ENST00000448885 KIAA1328Q86T90 577 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 CTNNA3Q9UI47 895 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 ESCO1Q5FWF5 840 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 ABTB2Q8N961 1025 aa7.26□□□□□ -1.25
PCDH15-219ENST00000448885 TWISTNBQ3B726 338 aaPredicted RBP7.25□□□□□ -1.25
PCDH15-219ENST00000448885 PDRG1Q9NUG6 133 aa7.25□□□□□ -1.25
PCDH15-219ENST00000448885 KRT85P78386 507 aa7.25□□□□□ -1.25
PCDH15-219ENST00000448885 TSG101Q99816 390 aa7.25□□□□□ -1.25
PCDH15-219ENST00000448885 UBAC1Q9BSL1 405 aa7.25□□□□□ -1.25
PCDH15-219ENST00000448885 SSR1P43307 286 aaKnown RBP7.25□□□□□ -1.25
PCDH15-219ENST00000448885 PPP1R1BQ9UD71 204 aaPredicted RBP7.25□□□□□ -1.25
PCDH15-219ENST00000448885 EPB41L2O43491 1005 aaKnown RBP7.25□□□□□ -1.25
PCDH15-219ENST00000448885 SPATA32Q96LK8 384 aa7.25□□□□□ -1.25
PCDH15-219ENST00000448885 NOB1Q9ULX3 412 aaKnown RBP7.25□□□□□ -1.25
PCDH15-219ENST00000448885 SAMD9Q5K651 1589 aa7.25□□□□□ -1.25
PCDH15-219ENST00000448885 STK11IPQ8N1F8 1099 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 CFAP45Q9UL16 551 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 PDZRN3Q9UPQ7 1066 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 GOLGA6L10A0A0M3HER8 536 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 ARHGAP5Q13017 1502 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 KIF21BO75037 1637 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 K7ELQ4 463 aaPredicted RBP7.24□□□□□ -1.25
PCDH15-219ENST00000448885 ANAPC15P60006 121 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 PDIA4P13667 645 aaKnown RBP7.24□□□□□ -1.25
PCDH15-219ENST00000448885 MCM3P25205 808 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 TDO2P48775 406 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 MAP2K1Q02750 393 aaPredicted RBP7.24□□□□□ -1.25
PCDH15-219ENST00000448885 KRT32Q14532 448 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 CCDC150Q8NCX0 1101 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 MPHOSPH8Q99549 860 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 GBP3Q9H0R5 595 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 SSBP05455 408 aaKnown RBP eCLIP7.24□□□□□ -1.25
PCDH15-219ENST00000448885 STRN4Q9NRL3 753 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 ARHGEF11O15085 1522 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 SYNJ1O43426 1573 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 EIF5P55010 431 aaKnown RBP7.24□□□□□ -1.25
PCDH15-219ENST00000448885 EHMT1Q9H9B1 1298 aa7.24□□□□□ -1.25
PCDH15-219ENST00000448885 CCDC102AQ96A19 550 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms