RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, human

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM2-208	ENST00000448732	MON2	Q7Z3U7	1717 aa		32.97	■■■□□ 2.87
R3HDM2-208	ENST00000448732	SOX12	O15370	315 aa		32.97	■■■□□ 2.87
R3HDM2-208	ENST00000448732	CD163L1	Q9NR16	1453 aa		32.95	■■■□□ 2.87
R3HDM2-208	ENST00000448732	PUS7	Q96PZ0	661 aa	Known RBP	32.95	■■■□□ 2.87
R3HDM2-208	ENST00000448732	NFAT5	O94916	1531 aa		32.95	■■■□□ 2.87
R3HDM2-208	ENST00000448732	USP31	Q70CQ4	1352 aa		32.95	■■■□□ 2.86
R3HDM2-208	ENST00000448732	DDB1	Q16531	1140 aa		32.94	■■■□□ 2.86
R3HDM2-208	ENST00000448732	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.94	■■■□□ 2.86
R3HDM2-208	ENST00000448732	TMC1	Q8TDI8	760 aa		32.94	■■■□□ 2.86
R3HDM2-208	ENST00000448732	SLC12A5	Q9H2X9	1139 aa		32.94	■■■□□ 2.86
R3HDM2-208	ENST00000448732	RGPD5	Q99666	1765 aa		32.93	■■■□□ 2.86
R3HDM2-208	ENST00000448732	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.93	■■■□□ 2.86
R3HDM2-208	ENST00000448732	CARD10	Q9BWT7	1032 aa		32.93	■■■□□ 2.86
R3HDM2-208	ENST00000448732	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.91	■■■□□ 2.86
R3HDM2-208	ENST00000448732	OVOS2	A0A0G2JMS6	1433 aa		32.91	■■■□□ 2.86
R3HDM2-208	ENST00000448732	OVOS2	A0A0J9YW53	1432 aa		32.91	■■■□□ 2.86
R3HDM2-208	ENST00000448732	OVOS2	Q6IE36	1432 aa		32.91	■■■□□ 2.86
R3HDM2-208	ENST00000448732	PEAK1	Q9H792	1746 aa		32.91	■■■□□ 2.86
R3HDM2-208	ENST00000448732	CSB-PGBD3	P0DP91	1061 aa		32.9	■■■□□ 2.86
R3HDM2-208	ENST00000448732	TRIM26	Q12899	539 aa	Predicted RBP	32.9	■■■□□ 2.86
R3HDM2-208	ENST00000448732	LRRC37A3	O60309	1634 aa		32.9	■■■□□ 2.86
R3HDM2-208	ENST00000448732	NME9	Q86XW9	330 aa		32.89	■■■□□ 2.86
R3HDM2-208	ENST00000448732	RREB1	Q92766	1687 aa		32.88	■■■□□ 2.85
R3HDM2-208	ENST00000448732	ABCC6	O95255	1503 aa		32.87	■■■□□ 2.85
R3HDM2-208	ENST00000448732	TERF2IP	Q9NYB0	399 aa		32.87	■■■□□ 2.85
R3HDM2-208	ENST00000448732	USP54	Q70EL1	1684 aa		32.87	■■■□□ 2.85
R3HDM2-208	ENST00000448732	WNK3	Q9BYP7	1800 aa		32.86	■■■□□ 2.85
R3HDM2-208	ENST00000448732	TESK2	Q96S53	571 aa		32.85	■■■□□ 2.85
R3HDM2-208	ENST00000448732	EDC4	Q6P2E9	1401 aa	Known RBP	32.85	■■■□□ 2.85
R3HDM2-208	ENST00000448732	NBPF14	Q5TI25	921 aa		32.84	■■■□□ 2.85
R3HDM2-208	ENST00000448732	MARCH10	Q8NA82	808 aa	Predicted RBP	32.84	■■■□□ 2.85
R3HDM2-208	ENST00000448732	SBF2	Q86WG5	1849 aa		32.84	■■■□□ 2.85
R3HDM2-208	ENST00000448732	ST20-MTHFS	A0A0A6YYL1	179 aa		32.83	■■■□□ 2.85
R3HDM2-208	ENST00000448732	NUP188	Q5SRE5	1749 aa		32.82	■■■□□ 2.85
R3HDM2-208	ENST00000448732	PLSCR1	O15162	318 aa		32.82	■■■□□ 2.84
R3HDM2-208	ENST00000448732	SLC24A1	O60721	1099 aa		32.82	■■■□□ 2.84
R3HDM2-208	ENST00000448732	BCL9	O00512	1426 aa		32.82	■■■□□ 2.84
R3HDM2-208	ENST00000448732	CCDC7	Q96M83	1385 aa		32.82	■■■□□ 2.84
R3HDM2-208	ENST00000448732	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.81	■■■□□ 2.84
R3HDM2-208	ENST00000448732		A0A1W2PP64	1363 aa		32.81	■■■□□ 2.84
R3HDM2-208	ENST00000448732	EXOC5	O00471	708 aa		32.8	■■■□□ 2.84
R3HDM2-208	ENST00000448732	NINL	Q9Y2I6	1382 aa		32.77	■■■□□ 2.84
R3HDM2-208	ENST00000448732	ERBB3	P21860	1342 aa		32.77	■■■□□ 2.84
R3HDM2-208	ENST00000448732	PTF1A	Q7RTS3	328 aa		32.76	■■■□□ 2.83
R3HDM2-208	ENST00000448732	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.74	■■■□□ 2.83
R3HDM2-208	ENST00000448732	LTN1	O94822	1766 aa		32.74	■■■□□ 2.83
R3HDM2-208	ENST00000448732	RGPD4	Q7Z3J3	1758 aa		32.74	■■■□□ 2.83
R3HDM2-208	ENST00000448732	NLRP2	Q9NX02	1062 aa		32.73	■■■□□ 2.83
R3HDM2-208	ENST00000448732	ANKRD24	Q8TF21	1146 aa		32.71	■■■□□ 2.83
R3HDM2-208	ENST00000448732	TNS2	Q63HR2	1409 aa		32.68	■■■□□ 2.82
R3HDM2-208	ENST00000448732	PROM2	Q8N271	834 aa		32.67	■■■□□ 2.82
R3HDM2-208	ENST00000448732	IP6K1	Q92551	441 aa		32.67	■■■□□ 2.82
R3HDM2-208	ENST00000448732	IL2RB	P14784	551 aa		32.66	■■■□□ 2.82
R3HDM2-208	ENST00000448732	COG3	Q96JB2	828 aa		32.64	■■■□□ 2.82
R3HDM2-208	ENST00000448732	TMF1	P82094	1093 aa		32.63	■■■□□ 2.81
R3HDM2-208	ENST00000448732	ANKRD36B	Q8N2N9	1353 aa		32.62	■■■□□ 2.81
R3HDM2-208	ENST00000448732	USP47	Q96K76	1375 aa		32.61	■■■□□ 2.81
R3HDM2-208	ENST00000448732	KCNQ2	O43526	872 aa		32.6	■■■□□ 2.81
R3HDM2-208	ENST00000448732	SPON1	Q9HCB6	807 aa		32.6	■■■□□ 2.81
R3HDM2-208	ENST00000448732	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.6	■■■□□ 2.81
R3HDM2-208	ENST00000448732	TXNRD1	Q16881	649 aa		32.58	■■■□□ 2.81
R3HDM2-208	ENST00000448732	MAP3K19	Q56UN5	1328 aa		32.57	■■■□□ 2.8
R3HDM2-208	ENST00000448732	FBLN1	P23142	703 aa		32.55	■■■□□ 2.8
R3HDM2-208	ENST00000448732	HOXC9	P31274	260 aa		32.55	■■■□□ 2.8
R3HDM2-208	ENST00000448732	LTV1	Q96GA3	475 aa	Predicted RBP	32.55	■■■□□ 2.8
R3HDM2-208	ENST00000448732	NHS	Q6T4R5	1651 aa		32.54	■■■□□ 2.8
R3HDM2-208	ENST00000448732	ACSBG1	Q96GR2	724 aa		32.54	■■■□□ 2.8
R3HDM2-208	ENST00000448732	TIMELESS	Q9UNS1	1208 aa		32.54	■■■□□ 2.8
R3HDM2-208	ENST00000448732	FYB1	O15117	783 aa		32.53	■■■□□ 2.8
R3HDM2-208	ENST00000448732	AMPH	P49418	695 aa		32.53	■■■□□ 2.8
R3HDM2-208	ENST00000448732	CDCA8	Q53HL2	280 aa		32.53	■■■□□ 2.8
R3HDM2-208	ENST00000448732	FAM208A	Q9UK61	1670 aa	Known RBP	32.52	■■■□□ 2.8
R3HDM2-208	ENST00000448732	STK32B	Q9NY57	414 aa		32.49	■■■□□ 2.79
R3HDM2-208	ENST00000448732	CASZ1	Q86V15	1759 aa		32.48	■■■□□ 2.79
R3HDM2-208	ENST00000448732	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.48	■■■□□ 2.79
R3HDM2-208	ENST00000448732	GGNBP2	Q9H3C7	697 aa		32.48	■■■□□ 2.79
R3HDM2-208	ENST00000448732	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.48	■■■□□ 2.79
R3HDM2-208	ENST00000448732	SLC15A2	Q16348	729 aa		32.47	■■■□□ 2.79
R3HDM2-208	ENST00000448732	DDX54	Q8TDD1	881 aa	Known RBP	32.45	■■■□□ 2.79
R3HDM2-208	ENST00000448732	CLSPN	Q9HAW4	1339 aa		32.45	■■■□□ 2.78
R3HDM2-208	ENST00000448732	RTL1	A6NKG5	1358 aa		32.45	■■■□□ 2.78
R3HDM2-208	ENST00000448732	RRS1	Q15050	365 aa	Known RBP	32.44	■■■□□ 2.78
R3HDM2-208	ENST00000448732	KAT6B	Q8WYB5	2073 aa		32.44	■■■□□ 2.78
R3HDM2-208	ENST00000448732	BTAF1	O14981	1849 aa		32.42	■■■□□ 2.78
R3HDM2-208	ENST00000448732	RGPD2	P0DJD1	1756 aa		32.4	■■■□□ 2.78
R3HDM2-208	ENST00000448732	ZBTB7A	O95365	584 aa		32.39	■■■□□ 2.78
R3HDM2-208	ENST00000448732	CARD14	Q9BXL6	1004 aa		32.39	■■■□□ 2.78
R3HDM2-208	ENST00000448732	NBPF6	Q5VWK0	638 aa		32.38	■■■□□ 2.77
R3HDM2-208	ENST00000448732	ZCRB1	Q8TBF4	217 aa	Known RBP	32.38	■■■□□ 2.77
R3HDM2-208	ENST00000448732	NBPF4	Q96M43	638 aa		32.38	■■■□□ 2.77
R3HDM2-208	ENST00000448732	PCGF6	Q9BYE7	350 aa		32.38	■■■□□ 2.77
R3HDM2-208	ENST00000448732	PTGER2	P43116	358 aa		32.36	■■■□□ 2.77
R3HDM2-208	ENST00000448732	LRRC4B	Q9NT99	713 aa		32.35	■■■□□ 2.77
R3HDM2-208	ENST00000448732	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.35	■■■□□ 2.77
R3HDM2-208	ENST00000448732	KIF20B	Q96Q89	1820 aa		32.35	■■■□□ 2.77
R3HDM2-208	ENST00000448732	MEGF6	O75095	1541 aa		32.34	■■■□□ 2.77
R3HDM2-208	ENST00000448732	PAPPA	Q13219	1627 aa		32.33	■■■□□ 2.77
R3HDM2-208	ENST00000448732	INSR	P06213	1382 aa		32.32	■■■□□ 2.77
R3HDM2-208	ENST00000448732	KIF24	Q5T7B8	1368 aa		32.32	■■■□□ 2.77
R3HDM2-208	ENST00000448732	CGNL1	Q0VF96	1302 aa		32.32	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms