RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
ZNF550-204ENST00000447310 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.55□□□□□ -0.24
ZNF550-204ENST00000447310 RAPGEF3O95398 923 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 TXNDC2Q86VQ3 553 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 FAM184AQ8NB25 1140 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 SPC24Q8NBT2 197 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 IFT57Q9NWB7 429 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 MAGI2Q86UL8 1455 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 MAP4K4O95819 1239 aaPredicted RBP13.55□□□□□ -0.24
ZNF550-204ENST00000447310 ZMYND15Q9H091 742 aa13.55□□□□□ -0.24
ZNF550-204ENST00000447310 WDR33Q9C0J8 1336 aaKnown RBP13.55□□□□□ -0.24
ZNF550-204ENST00000447310 TEFQ10587 303 aa13.54□□□□□ -0.24
ZNF550-204ENST00000447310 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
ZNF550-204ENST00000447310 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
ZNF550-204ENST00000447310 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
ZNF550-204ENST00000447310 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
ZNF550-204ENST00000447310 IL16Q14005 1332 aa13.54□□□□□ -0.24
ZNF550-204ENST00000447310 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
ZNF550-204ENST00000447310 EIF2AK4Q9P2K8 1649 aaKnown RBP13.54□□□□□ -0.24
ZNF550-204ENST00000447310 HMGN5P82970 282 aaKnown RBP13.54□□□□□ -0.24
ZNF550-204ENST00000447310 MCM10Q7L590 875 aa13.54□□□□□ -0.24
ZNF550-204ENST00000447310 FYB1O15117 783 aa13.53□□□□□ -0.24
ZNF550-204ENST00000447310 GNL2Q13823 731 aaKnown RBP13.53□□□□□ -0.24
ZNF550-204ENST00000447310 ZSCAN23Q3MJ62 389 aa13.53□□□□□ -0.24
ZNF550-204ENST00000447310 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
ZNF550-204ENST00000447310 GDPD2Q9HCC8 539 aa13.53□□□□□ -0.24
ZNF550-204ENST00000447310 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
ZNF550-204ENST00000447310 CCT4P50991 539 aaKnown RBP13.53□□□□□ -0.24
ZNF550-204ENST00000447310 SF3A1Q15459 793 aaKnown RBP13.53□□□□□ -0.24
ZNF550-204ENST00000447310 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
ZNF550-204ENST00000447310 DUOX2Q9NRD8 1548 aa13.52□□□□□ -0.24
ZNF550-204ENST00000447310 CCDC30Q5VVM6 783 aa13.52□□□□□ -0.25
ZNF550-204ENST00000447310 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
ZNF550-204ENST00000447310 F6X3S4 739 aa13.52□□□□□ -0.25
ZNF550-204ENST00000447310 ZNF771Q7L3S4 317 aaPredicted RBP13.52□□□□□ -0.25
ZNF550-204ENST00000447310 CNTROBQ8N137 903 aa13.52□□□□□ -0.25
ZNF550-204ENST00000447310 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
ZNF550-204ENST00000447310 NME9Q86XW9 330 aa13.51□□□□□ -0.25
ZNF550-204ENST00000447310 NSD2O96028 1365 aa13.51□□□□□ -0.25
ZNF550-204ENST00000447310 IDI1Q13907 227 aa13.51□□□□□ -0.25
ZNF550-204ENST00000447310 TTC22Q5TAA0 569 aa13.51□□□□□ -0.25
ZNF550-204ENST00000447310 RBM25P49756 843 aaKnown RBP13.51□□□□□ -0.25
ZNF550-204ENST00000447310 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
ZNF550-204ENST00000447310 TRAPPC8Q9Y2L5 1435 aa13.51□□□□□ -0.25
ZNF550-204ENST00000447310 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
ZNF550-204ENST00000447310 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
ZNF550-204ENST00000447310 SDSP20132 328 aa13.5□□□□□ -0.25
ZNF550-204ENST00000447310 TSHZ3Q63HK5 1081 aa13.5□□□□□ -0.25
ZNF550-204ENST00000447310 CLASRPQ8N2M8 674 aaKnown RBP13.5□□□□□ -0.25
ZNF550-204ENST00000447310 TRIM5Q9C035 493 aa13.5□□□□□ -0.25
ZNF550-204ENST00000447310 HSP90AB4PQ58FF6 505 aa13.5□□□□□ -0.25
ZNF550-204ENST00000447310 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
ZNF550-204ENST00000447310 RTEL1-TNFRSF6BF6WH68 1400 aa13.5□□□□□ -0.25
ZNF550-204ENST00000447310 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
ZNF550-204ENST00000447310 FOSBP53539 338 aa13.49□□□□□ -0.25
ZNF550-204ENST00000447310 RNF20Q5VTR2 975 aa13.49□□□□□ -0.25
ZNF550-204ENST00000447310 ANTXR1Q9H6X2 564 aa13.49□□□□□ -0.25
ZNF550-204ENST00000447310 PRIM1P49642 420 aaKnown RBP13.49□□□□□ -0.25
ZNF550-204ENST00000447310 TPM4P67936 248 aa13.49□□□□□ -0.25
ZNF550-204ENST00000447310 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
ZNF550-204ENST00000447310 ARHGAP45Q92619 1136 aa13.49□□□□□ -0.25
ZNF550-204ENST00000447310 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
ZNF550-204ENST00000447310 MX1P20591 662 aa13.48□□□□□ -0.25
ZNF550-204ENST00000447310 G3BP1Q13283 466 aaKnown RBP eCLIP13.48□□□□□ -0.25
ZNF550-204ENST00000447310 OSCARQ8IYS5 282 aa13.48□□□□□ -0.25
ZNF550-204ENST00000447310 USP25Q9UHP3 1055 aa13.48□□□□□ -0.25
ZNF550-204ENST00000447310 USP19O94966 1318 aa13.48□□□□□ -0.25
ZNF550-204ENST00000447310 C8orf58Q8NAV2 365 aa13.48□□□□□ -0.25
ZNF550-204ENST00000447310 VAMP4O75379 141 aa13.48□□□□□ -0.25
ZNF550-204ENST00000447310 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
ZNF550-204ENST00000447310 PLCH2O75038 1416 aa13.48□□□□□ -0.25
ZNF550-204ENST00000447310 NUTM1Q86Y26 1132 aa13.48□□□□□ -0.25
ZNF550-204ENST00000447310 ZGPATQ8N5A5 531 aaKnown RBP13.48□□□□□ -0.25
ZNF550-204ENST00000447310 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
ZNF550-204ENST00000447310 HDGFL1Q5TGJ6 251 aa13.47□□□□□ -0.25
ZNF550-204ENST00000447310 CWC27Q6UX04 472 aaKnown RBP13.47□□□□□ -0.25
ZNF550-204ENST00000447310 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
ZNF550-204ENST00000447310 NLRP6P59044 892 aa13.47□□□□□ -0.25
ZNF550-204ENST00000447310 ZNF330Q9Y3S2 320 aaPredicted RBP13.47□□□□□ -0.25
ZNF550-204ENST00000447310 ADGRL1O94910 1474 aa13.47□□□□□ -0.25
ZNF550-204ENST00000447310 ZBTB7BO15156 539 aaPredicted RBP13.46□□□□□ -0.25
ZNF550-204ENST00000447310 CCDC192P0DO97 292 aa13.46□□□□□ -0.25
ZNF550-204ENST00000447310 TMX3Q96JJ7 454 aa13.46□□□□□ -0.25
ZNF550-204ENST00000447310 MEIS3Q99687 375 aa13.46□□□□□ -0.25
ZNF550-204ENST00000447310 PRDM10Q9NQV6 1147 aa13.46□□□□□ -0.25
ZNF550-204ENST00000447310 TRIM35Q9UPQ4 493 aa13.46□□□□□ -0.25
ZNF550-204ENST00000447310 SRCIN1Q9C0H9 1055 aa13.46□□□□□ -0.25
ZNF550-204ENST00000447310 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
ZNF550-204ENST00000447310 PHACTR3Q96KR7 559 aa13.46□□□□□ -0.26
ZNF550-204ENST00000447310 SRGAP3O43295 1099 aa13.45□□□□□ -0.26
ZNF550-204ENST00000447310 TPM3P06753 285 aa13.45□□□□□ -0.26
ZNF550-204ENST00000447310 NUDT16Q96DE0 195 aaKnown RBP13.45□□□□□ -0.26
ZNF550-204ENST00000447310 LRSAM1Q6UWE0 723 aa13.45□□□□□ -0.26
ZNF550-204ENST00000447310 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
ZNF550-204ENST00000447310 PLEKHM2Q8IWE5 1019 aa13.45□□□□□ -0.26
ZNF550-204ENST00000447310 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
ZNF550-204ENST00000447310 CYP46A1Q9Y6A2 500 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms