RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 QRICH2Q9H0J4 1663 aa34.96■■■■□ 3.19
PMS1-214ENST00000446877 SOX12O15370 315 aa34.96■■■■□ 3.19
PMS1-214ENST00000446877 ARHGEF25Q86VW2 580 aa34.96■■■■□ 3.19
PMS1-214ENST00000446877 TTC21BQ7Z4L5 1316 aa34.96■■■■□ 3.19
PMS1-214ENST00000446877 MARCH10Q8NA82 808 aaPredicted RBP34.94■■■■□ 3.18
PMS1-214ENST00000446877 CARD10Q9BWT7 1032 aa34.93■■■■□ 3.18
PMS1-214ENST00000446877 CPSF1Q10570 1443 aaKnown RBP34.92■■■■□ 3.18
PMS1-214ENST00000446877 PTF1AQ7RTS3 328 aa34.91■■■■□ 3.18
PMS1-214ENST00000446877 TTC21AQ8NDW8 1320 aa34.9■■■■□ 3.18
PMS1-214ENST00000446877 NINLQ9Y2I6 1382 aa34.89■■■■□ 3.18
PMS1-214ENST00000446877 EXOC5O00471 708 aa34.89■■■■□ 3.18
PMS1-214ENST00000446877 ANO8Q9HCE9 1232 aaPredicted RBP34.88■■■■□ 3.17
PMS1-214ENST00000446877 PEAK1Q9H792 1746 aa34.88■■■■□ 3.17
PMS1-214ENST00000446877 ROCK2O75116 1388 aaKnown RBP34.87■■■■□ 3.17
PMS1-214ENST00000446877 LRRC37A3O60309 1634 aa34.87■■■■□ 3.17
PMS1-214ENST00000446877 PIK3C2AO00443 1686 aa34.86■■■■□ 3.17
PMS1-214ENST00000446877 BCL9O00512 1426 aa34.85■■■■□ 3.17
PMS1-214ENST00000446877 PROM2Q8N271 834 aa34.85■■■■□ 3.17
PMS1-214ENST00000446877 SIN3AQ96ST3 1273 aa34.84■■■■□ 3.17
PMS1-214ENST00000446877 NEUROD1Q13562 356 aa34.83■■■■□ 3.17
PMS1-214ENST00000446877 KTN1Q86UP2 1357 aaKnown RBP34.83■■■■□ 3.17
PMS1-214ENST00000446877 COL18A1P39060 1754 aa34.82■■■■□ 3.17
PMS1-214ENST00000446877 STK32BQ9NY57 414 aa34.82■■■■□ 3.16
PMS1-214ENST00000446877 CCDC7Q96M83 1385 aa34.81■■■■□ 3.16
PMS1-214ENST00000446877 TRPM1Q7Z4N2 1603 aa34.81■■■■□ 3.16
PMS1-214ENST00000446877 ZBTB7AO95365 584 aa34.8■■■■□ 3.16
PMS1-214ENST00000446877 TXNRD1Q16881 649 aa34.8■■■■□ 3.16
PMS1-214ENST00000446877 RGPD3A6NKT7 1758 aaPredicted RBP34.79■■■■□ 3.16
PMS1-214ENST00000446877 RGPD4Q7Z3J3 1758 aa34.79■■■■□ 3.16
PMS1-214ENST00000446877 PDGFDQ9GZP0 370 aaPredicted RBP34.78■■■■□ 3.16
PMS1-214ENST00000446877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.76■■■■□ 3.16
PMS1-214ENST00000446877 SBF2Q86WG5 1849 aa34.76■■■■□ 3.15
PMS1-214ENST00000446877 ATF5Q9Y2D1 282 aaPredicted RBP34.74■■■■□ 3.15
PMS1-214ENST00000446877 SLC15A2Q16348 729 aa34.73■■■■□ 3.15
PMS1-214ENST00000446877 NLRP2Q9NX02 1062 aa34.73■■■■□ 3.15
PMS1-214ENST00000446877 NFAT5O94916 1531 aa34.7■■■■□ 3.14
PMS1-214ENST00000446877 PTGER2P43116 358 aa34.69■■■■□ 3.14
PMS1-214ENST00000446877 TMC1Q8TDI8 760 aa34.69■■■■□ 3.14
PMS1-214ENST00000446877 TNS2Q63HR2 1409 aa34.68■■■■□ 3.14
PMS1-214ENST00000446877 USP31Q70CQ4 1352 aa34.68■■■■□ 3.14
PMS1-214ENST00000446877 ACSBG1Q96GR2 724 aa34.67■■■■□ 3.14
PMS1-214ENST00000446877 IL2RBP14784 551 aa34.66■■■■□ 3.14
PMS1-214ENST00000446877 HDGFL2Q7Z4V5 671 aaPredicted RBP34.66■■■■□ 3.14
PMS1-214ENST00000446877 NME9Q86XW9 330 aa34.66■■■■□ 3.14
PMS1-214ENST00000446877 WNK3Q9BYP7 1800 aa34.66■■■■□ 3.14
PMS1-214ENST00000446877 AKAP12Q02952 1782 aa34.66■■■■□ 3.14
PMS1-214ENST00000446877 ABCC6O95255 1503 aa34.65■■■■□ 3.14
PMS1-214ENST00000446877 ERBB3P21860 1342 aa34.65■■■■□ 3.14
PMS1-214ENST00000446877 MTFR1LQ9H019 292 aa34.65■■■■□ 3.14
PMS1-214ENST00000446877 CASZ1Q86V15 1759 aa34.64■■■■□ 3.14
PMS1-214ENST00000446877 CARD11Q9BXL7 1154 aa34.63■■■■□ 3.13
PMS1-214ENST00000446877 RGPD5Q99666 1765 aa34.63■■■■□ 3.13
PMS1-214ENST00000446877 SBNO2Q9Y2G9 1366 aa34.62■■■■□ 3.13
PMS1-214ENST00000446877 ANKRD24Q8TF21 1146 aa34.62■■■■□ 3.13
PMS1-214ENST00000446877 FHDC1Q9C0D6 1143 aaPredicted RBP34.6■■■■□ 3.13
PMS1-214ENST00000446877 SYT17Q9BSW7 474 aa34.59■■■■□ 3.13
PMS1-214ENST00000446877 SLC12A5Q9H2X9 1139 aa34.58■■■■□ 3.13
PMS1-214ENST00000446877 TERF2IPQ9NYB0 399 aa34.58■■■■□ 3.13
PMS1-214ENST00000446877 CD163L1Q9NR16 1453 aa34.52■■■■□ 3.12
PMS1-214ENST00000446877 ARXQ96QS3 562 aa34.52■■■■□ 3.12
PMS1-214ENST00000446877 MON2Q7Z3U7 1717 aa34.52■■■■□ 3.12
PMS1-214ENST00000446877 MYOM1P52179 1685 aa34.51■■■■□ 3.12
PMS1-214ENST00000446877 EDC4Q6P2E9 1401 aaKnown RBP34.51■■■■□ 3.12
PMS1-214ENST00000446877 SGIP1Q9BQI5 828 aa34.51■■■■□ 3.12
PMS1-214ENST00000446877 NHSQ6T4R5 1651 aa34.48■■■■□ 3.11
PMS1-214ENST00000446877 DDX54Q8TDD1 881 aaKnown RBP34.48■■■■□ 3.11
PMS1-214ENST00000446877 IP6K1Q92551 441 aa34.48■■■■□ 3.11
PMS1-214ENST00000446877 UTRNP46939 3433 aa34.47■■■■□ 3.11
PMS1-214ENST00000446877 LTV1Q96GA3 475 aaPredicted RBP34.47■■■■□ 3.11
PMS1-214ENST00000446877 PUS7Q96PZ0 661 aaKnown RBP34.47■■■■□ 3.11
PMS1-214ENST00000446877 ZNF827Q17R98 1081 aa34.45■■■■□ 3.11
PMS1-214ENST00000446877 ZNF784Q8NCA9 323 aaPredicted RBP34.45■■■■□ 3.11
PMS1-214ENST00000446877 LRRC4BQ9NT99 713 aa34.45■■■■□ 3.11
PMS1-214ENST00000446877 A0A1W2PP64 1363 aa34.44■■■■□ 3.1
PMS1-214ENST00000446877 SLC27A3Q5K4L6 730 aa34.43■■■■□ 3.1
PMS1-214ENST00000446877 USP54Q70EL1 1684 aa34.41■■■■□ 3.1
PMS1-214ENST00000446877 COG3Q96JB2 828 aa34.4■■■■□ 3.1
PMS1-214ENST00000446877 SLC16A10Q8TF71 515 aa34.39■■■■□ 3.1
PMS1-214ENST00000446877 SYTL4Q96C24 671 aaPredicted RBP34.39■■■■□ 3.1
PMS1-214ENST00000446877 TONSLQ96HA7 1378 aa34.38■■■■□ 3.09
PMS1-214ENST00000446877 AKT1S1Q96B36 256 aa34.38■■■■□ 3.09
PMS1-214ENST00000446877 LTN1O94822 1766 aa34.38■■■■□ 3.09
PMS1-214ENST00000446877 POLD1P28340 1107 aa34.37■■■■□ 3.09
PMS1-214ENST00000446877 MAP3K5Q99683 1374 aa34.36■■■■□ 3.09
PMS1-214ENST00000446877 AMPHP49418 695 aa34.36■■■■□ 3.09
PMS1-214ENST00000446877 GPR162Q16538 588 aa34.35■■■■□ 3.09
PMS1-214ENST00000446877 BTAF1O14981 1849 aa34.34■■■■□ 3.09
PMS1-214ENST00000446877 PAPPAQ13219 1627 aa34.34■■■■□ 3.09
PMS1-214ENST00000446877 KAT6BQ8WYB5 2073 aa34.34■■■■□ 3.09
PMS1-214ENST00000446877 SLC24A1O60721 1099 aa34.34■■■■□ 3.09
PMS1-214ENST00000446877 PRIM1P49642 420 aaKnown RBP34.34■■■■□ 3.09
PMS1-214ENST00000446877 TFCP2L1Q9NZI6 479 aa34.34■■■■□ 3.09
PMS1-214ENST00000446877 KLHL34Q8N239 644 aa34.33■■■■□ 3.09
PMS1-214ENST00000446877 MAP3K19Q56UN5 1328 aa34.32■■■■□ 3.09
PMS1-214ENST00000446877 HOXC9P31274 260 aa34.32■■■■□ 3.08
PMS1-214ENST00000446877 ZCRB1Q8TBF4 217 aaKnown RBP34.31■■■■□ 3.08
PMS1-214ENST00000446877 ANKRD36BQ8N2N9 1353 aa34.29■■■■□ 3.08
PMS1-214ENST00000446877 ST20-MTHFSA0A0A6YYL1 179 aa34.29■■■■□ 3.08
PMS1-214ENST00000446877 KCNQ4P56696 695 aa34.28■■■■□ 3.08
PMS1-214ENST00000446877 PNPLA7Q6ZV29 1317 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms