RNA–Protein interactions for RNA: ENST00000446404.1

AP000402.1-201, humanhuman

TSL 3 BASIC

Gene AP000402.1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000402.1-201ENST00000446404 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.97□□□□□ -0.49
AP000402.1-201ENST00000446404 SLC19A1P41440 591 aa11.97□□□□□ -0.49
AP000402.1-201ENST00000446404 PLEKHM2Q8IWE5 1019 aa11.97□□□□□ -0.49
AP000402.1-201ENST00000446404 USP17L5A8MUK1 530 aa11.96□□□□□ -0.49
AP000402.1-201ENST00000446404 GIGYF1O75420 1035 aaPredicted RBP11.96□□□□□ -0.49
AP000402.1-201ENST00000446404 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
AP000402.1-201ENST00000446404 USP17L3A6NCW0 530 aa11.95□□□□□ -0.5
AP000402.1-201ENST00000446404 USP17L4A6NCW7 530 aa11.95□□□□□ -0.5
AP000402.1-201ENST00000446404 ESPNB1AK53 854 aa11.95□□□□□ -0.5
AP000402.1-201ENST00000446404 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
AP000402.1-201ENST00000446404 USP17L1Q7RTZ2 530 aa11.95□□□□□ -0.5
AP000402.1-201ENST00000446404 PLPP7Q8NBV4 271 aa11.95□□□□□ -0.5
AP000402.1-201ENST00000446404 MAP4K5Q9Y4K4 846 aa11.95□□□□□ -0.5
AP000402.1-201ENST00000446404 MAP7D1Q3KQU3 841 aa11.94□□□□□ -0.5
AP000402.1-201ENST00000446404 RNF20Q5VTR2 975 aa11.94□□□□□ -0.5
AP000402.1-201ENST00000446404 SEPT12Q8IYM1 358 aa11.93□□□□□ -0.5
AP000402.1-201ENST00000446404 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
AP000402.1-201ENST00000446404 WNT7AO00755 349 aa11.92□□□□□ -0.5
AP000402.1-201ENST00000446404 LZTS3O60299 673 aaPredicted RBP11.92□□□□□ -0.5
AP000402.1-201ENST00000446404 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
AP000402.1-201ENST00000446404 TRAF7Q6Q0C0 670 aa11.92□□□□□ -0.5
AP000402.1-201ENST00000446404 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
AP000402.1-201ENST00000446404 KCTD15Q96SI1 283 aaPredicted RBP11.92□□□□□ -0.5
AP000402.1-201ENST00000446404 KANK4Q5T7N3 995 aaPredicted RBP11.91□□□□□ -0.5
AP000402.1-201ENST00000446404 CCDC125Q86Z20 511 aa11.91□□□□□ -0.5
AP000402.1-201ENST00000446404 DEPDC4Q8N2C3 294 aa11.91□□□□□ -0.5
AP000402.1-201ENST00000446404 MPNDQ8N594 471 aa11.91□□□□□ -0.5
AP000402.1-201ENST00000446404 CDK15Q96Q40 435 aa11.91□□□□□ -0.5
AP000402.1-201ENST00000446404 NCOA4Q13772 614 aa11.9□□□□□ -0.5
AP000402.1-201ENST00000446404 TSGA10IPQ3SY00 556 aa11.9□□□□□ -0.5
AP000402.1-201ENST00000446404 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.5
AP000402.1-201ENST00000446404 VRTNQ9H8Y1 702 aa11.9□□□□□ -0.5
AP000402.1-201ENST00000446404 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.5
AP000402.1-201ENST00000446404 SIAH2O43255 324 aa11.89□□□□□ -0.51
AP000402.1-201ENST00000446404 RETREG2Q8NC44 543 aa11.89□□□□□ -0.51
AP000402.1-201ENST00000446404 EML3Q32P44 896 aa11.88□□□□□ -0.51
AP000402.1-201ENST00000446404 CDCA8Q53HL2 280 aa11.88□□□□□ -0.51
AP000402.1-201ENST00000446404 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
AP000402.1-201ENST00000446404 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
AP000402.1-201ENST00000446404 ATG7O95352 703 aa11.87□□□□□ -0.51
AP000402.1-201ENST00000446404 ARID5BQ14865 1188 aa11.87□□□□□ -0.51
AP000402.1-201ENST00000446404 INTS6LQ5JSJ4 861 aaKnown RBP11.87□□□□□ -0.51
AP000402.1-201ENST00000446404 ZNF697Q5TEC3 545 aa11.87□□□□□ -0.51
AP000402.1-201ENST00000446404 MRGPRX2Q96LB1 330 aa11.87□□□□□ -0.51
AP000402.1-201ENST00000446404 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
AP000402.1-201ENST00000446404 V9GY48 417 aaPredicted RBP11.87□□□□□ -0.51
AP000402.1-201ENST00000446404 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
AP000402.1-201ENST00000446404 PCDHB11Q9Y5F2 797 aa11.86□□□□□ -0.51
AP000402.1-201ENST00000446404 ATP5J2-PTCD1G3V325 749 aa11.85□□□□□ -0.51
AP000402.1-201ENST00000446404 FSHRP23945 695 aa11.84□□□□□ -0.51
AP000402.1-201ENST00000446404 GRM5P41594 1212 aa11.84□□□□□ -0.51
AP000402.1-201ENST00000446404 RAB15P59190 212 aa11.84□□□□□ -0.51
AP000402.1-201ENST00000446404 OXLD1Q5BKU9 147 aa11.84□□□□□ -0.51
AP000402.1-201ENST00000446404 CDCA7Q9BWT1 371 aaPredicted RBP11.84□□□□□ -0.51
AP000402.1-201ENST00000446404 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
AP000402.1-201ENST00000446404 ADH1CP00326 375 aa11.83□□□□□ -0.52
AP000402.1-201ENST00000446404 PDIA4P13667 645 aaKnown RBP11.83□□□□□ -0.52
AP000402.1-201ENST00000446404 FAM196BA6NMK8 535 aa11.82□□□□□ -0.52
AP000402.1-201ENST00000446404 ERVH48-1M5A8F1 160 aa11.82□□□□□ -0.52
AP000402.1-201ENST00000446404 CSB-PGBD3P0DP91 1061 aa11.82□□□□□ -0.52
AP000402.1-201ENST00000446404 ELOAQ14241 798 aaKnown RBP11.82□□□□□ -0.52
AP000402.1-201ENST00000446404 PKD2L1Q9P0L9 805 aa11.82□□□□□ -0.52
AP000402.1-201ENST00000446404 DHX9Q08211 1270 aaKnown RBP11.81□□□□□ -0.52
AP000402.1-201ENST00000446404 USP4Q13107 963 aa11.81□□□□□ -0.52
AP000402.1-201ENST00000446404 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
AP000402.1-201ENST00000446404 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
AP000402.1-201ENST00000446404 TRAIPQ9BWF2 469 aa11.81□□□□□ -0.52
AP000402.1-201ENST00000446404 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L15C9J2P7 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L10C9JJH3 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L13C9JLJ4 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L12C9JPN9 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L11C9JVI0 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L21D6R901 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L18D6R9N7 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L22D6RA61 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L17D6RBQ6 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L19D6RCP7 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L20D6RJB6 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 RASA1P20936 1047 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 PDE4CQ08493 712 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 USP17L24Q0WX57 530 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 FOXC1Q12948 553 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 NR5A1Q13285 461 aa11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 CRTC2Q53ET0 693 aaPredicted RBP11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
AP000402.1-201ENST00000446404 ATP1A2P50993 1020 aa11.79□□□□□ -0.52
AP000402.1-201ENST00000446404 PTK7Q13308 1070 aa11.79□□□□□ -0.52
AP000402.1-201ENST00000446404 CCDC116Q8IYX3 515 aa11.78□□□□□ -0.52
AP000402.1-201ENST00000446404 OGFOD1Q8N543 542 aa11.78□□□□□ -0.52
AP000402.1-201ENST00000446404 ZMIZ1Q9ULJ6 1067 aa11.78□□□□□ -0.52
AP000402.1-201ENST00000446404 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
AP000402.1-201ENST00000446404 GTF2IP78347 998 aa11.77□□□□□ -0.53
AP000402.1-201ENST00000446404 CLDN10P78369 228 aa11.77□□□□□ -0.53
AP000402.1-201ENST00000446404 TRIM52Q96A61 297 aa11.77□□□□□ -0.53
AP000402.1-201ENST00000446404 DNAAF2Q9NVR5 837 aaKnown RBP11.77□□□□□ -0.53
AP000402.1-201ENST00000446404 NOVA2Q9UNW9 492 aaKnown RBP11.77□□□□□ -0.53
AP000402.1-201ENST00000446404 GDF9O60383 454 aa11.76□□□□□ -0.53
AP000402.1-201ENST00000446404 ALDH1A1P00352 501 aa11.76□□□□□ -0.53
AP000402.1-201ENST00000446404 NR3C2P08235 984 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms