RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 MCCD1P59942 119 aaPredicted RBP12.44□□□□□ -0.42
ATP13A3-204ENST00000446356 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
ATP13A3-204ENST00000446356 GRM5P41594 1212 aa12.43□□□□□ -0.42
ATP13A3-204ENST00000446356 WASHC4Q2M389 1173 aa12.43□□□□□ -0.42
ATP13A3-204ENST00000446356 CRIPAKQ8N1N5 446 aa12.43□□□□□ -0.42
ATP13A3-204ENST00000446356 EIF4G2P78344 907 aaKnown RBP eCLIP12.42□□□□□ -0.42
ATP13A3-204ENST00000446356 CCDC116Q8IYX3 515 aa12.42□□□□□ -0.42
ATP13A3-204ENST00000446356 SMCPP49901 116 aaPredicted RBP12.41□□□□□ -0.42
ATP13A3-204ENST00000446356 DHX9Q08211 1270 aaKnown RBP12.41□□□□□ -0.42
ATP13A3-204ENST00000446356 IRF5Q13568 498 aa12.41□□□□□ -0.42
ATP13A3-204ENST00000446356 ST8SIA5O15466 376 aa12.4□□□□□ -0.42
ATP13A3-204ENST00000446356 CAPN5O15484 640 aaPredicted RBP12.4□□□□□ -0.42
ATP13A3-204ENST00000446356 NR3C2P08235 984 aa12.4□□□□□ -0.42
ATP13A3-204ENST00000446356 WDR4P57081 412 aaKnown RBP12.4□□□□□ -0.42
ATP13A3-204ENST00000446356 AAASQ9NRG9 546 aa12.4□□□□□ -0.42
ATP13A3-204ENST00000446356 POM121Q96HA1 1249 aa12.39□□□□□ -0.43
ATP13A3-204ENST00000446356 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
ATP13A3-204ENST00000446356 RAB15P59190 212 aa12.38□□□□□ -0.43
ATP13A3-204ENST00000446356 TRIM52Q96A61 297 aa12.38□□□□□ -0.43
ATP13A3-204ENST00000446356 PGPEP1Q9NXJ5 209 aa12.38□□□□□ -0.43
ATP13A3-204ENST00000446356 ZIC2O95409 532 aaPredicted RBP12.37□□□□□ -0.43
ATP13A3-204ENST00000446356 VAC14Q08AM6 782 aa12.37□□□□□ -0.43
ATP13A3-204ENST00000446356 INTS6LQ5JSJ4 861 aaKnown RBP12.37□□□□□ -0.43
ATP13A3-204ENST00000446356 SEPT12Q8IYM1 358 aa12.37□□□□□ -0.43
ATP13A3-204ENST00000446356 TIMP2P16035 220 aa12.35□□□□□ -0.43
ATP13A3-204ENST00000446356 RNF20Q5VTR2 975 aa12.35□□□□□ -0.43
ATP13A3-204ENST00000446356 SOX11P35716 441 aa12.34□□□□□ -0.43
ATP13A3-204ENST00000446356 PPP1R26Q5T8A7 1209 aaPredicted RBP12.34□□□□□ -0.43
ATP13A3-204ENST00000446356 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
ATP13A3-204ENST00000446356 ITPKCQ96DU7 683 aa12.34□□□□□ -0.43
ATP13A3-204ENST00000446356 ESPNB1AK53 854 aa12.33□□□□□ -0.44
ATP13A3-204ENST00000446356 ZFAND3Q9H8U3 227 aa12.32□□□□□ -0.44
ATP13A3-204ENST00000446356 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
ATP13A3-204ENST00000446356 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
ATP13A3-204ENST00000446356 SEMA3FQ13275 785 aa12.31□□□□□ -0.44
ATP13A3-204ENST00000446356 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
ATP13A3-204ENST00000446356 KLF16Q9BXK1 252 aaPredicted RBP12.31□□□□□ -0.44
ATP13A3-204ENST00000446356 ERVH48-1M5A8F1 160 aa12.29□□□□□ -0.44
ATP13A3-204ENST00000446356 UPP2O95045 317 aa12.29□□□□□ -0.44
ATP13A3-204ENST00000446356 PROSER2Q86WR7 435 aaPredicted RBP12.29□□□□□ -0.44
ATP13A3-204ENST00000446356 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
ATP13A3-204ENST00000446356 SLFNL1Q499Z3 407 aa12.28□□□□□ -0.44
ATP13A3-204ENST00000446356 CEP126Q9P2H0 1117 aa12.28□□□□□ -0.44
ATP13A3-204ENST00000446356 BMP1P13497 986 aa12.27□□□□□ -0.45
ATP13A3-204ENST00000446356 SCARF1Q14162 830 aa12.27□□□□□ -0.45
ATP13A3-204ENST00000446356 DACH1Q9UI36 760 aa12.27□□□□□ -0.45
ATP13A3-204ENST00000446356 SENP2Q9HC62 589 aa12.26□□□□□ -0.45
ATP13A3-204ENST00000446356 TMPRSS4Q9NRS4 437 aa12.26□□□□□ -0.45
ATP13A3-204ENST00000446356 A6NJR5 290 aa12.25□□□□□ -0.45
ATP13A3-204ENST00000446356 MRPL14Q6P1L8 145 aaKnown RBP12.25□□□□□ -0.45
ATP13A3-204ENST00000446356 MEIOBQ8N635 442 aa12.25□□□□□ -0.45
ATP13A3-204ENST00000446356 ZNF784Q8NCA9 323 aaPredicted RBP12.25□□□□□ -0.45
ATP13A3-204ENST00000446356 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
ATP13A3-204ENST00000446356 PCDHB11Q9Y5F2 797 aa12.24□□□□□ -0.45
ATP13A3-204ENST00000446356 RNF135Q8IUD6 432 aa12.23□□□□□ -0.45
ATP13A3-204ENST00000446356 KIFC2Q96AC6 838 aa12.23□□□□□ -0.45
ATP13A3-204ENST00000446356 CYLDQ9NQC7 956 aa12.23□□□□□ -0.45
ATP13A3-204ENST00000446356 ZNF787Q6DD87 383 aa12.22□□□□□ -0.45
ATP13A3-204ENST00000446356 LINC00528Q8N1L1 170 aa12.22□□□□□ -0.45
ATP13A3-204ENST00000446356 TSEN34Q9BSV6 310 aaKnown RBP12.22□□□□□ -0.45
ATP13A3-204ENST00000446356 GMPR2Q9P2T1 348 aaKnown RBP12.22□□□□□ -0.45
ATP13A3-204ENST00000446356 C11orf95C9JLR9 678 aaPredicted RBP12.21□□□□□ -0.45
ATP13A3-204ENST00000446356 CBLBQ13191 982 aa12.21□□□□□ -0.45
ATP13A3-204ENST00000446356 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.45
ATP13A3-204ENST00000446356 BMP2P12643 396 aa12.2□□□□□ -0.46
ATP13A3-204ENST00000446356 C6orf118Q5T5N4 469 aa12.2□□□□□ -0.46
ATP13A3-204ENST00000446356 Q6ZVU0 165 aa12.2□□□□□ -0.46
ATP13A3-204ENST00000446356 PURBQ96QR8 312 aaKnown RBP12.2□□□□□ -0.46
ATP13A3-204ENST00000446356 DOLKQ9UPQ8 538 aa12.2□□□□□ -0.46
ATP13A3-204ENST00000446356 POM121CA8CG34 1229 aa12.19□□□□□ -0.46
ATP13A3-204ENST00000446356 CC2D2BQ6DHV5 1058 aa12.19□□□□□ -0.46
ATP13A3-204ENST00000446356 FNBP4Q8N3X1 1017 aaPredicted RBP12.19□□□□□ -0.46
ATP13A3-204ENST00000446356 ALG2Q9H553 416 aa12.19□□□□□ -0.46
ATP13A3-204ENST00000446356 MYCP01106 439 aaPredicted RBP12.18□□□□□ -0.46
ATP13A3-204ENST00000446356 TRIM47Q96LD4 638 aa12.18□□□□□ -0.46
ATP13A3-204ENST00000446356 ZFP42Q96MM3 310 aa12.18□□□□□ -0.46
ATP13A3-204ENST00000446356 LILRA1O75019 489 aa12.17□□□□□ -0.46
ATP13A3-204ENST00000446356 ADH1AP07327 375 aa12.17□□□□□ -0.46
ATP13A3-204ENST00000446356 ERVK-9P63128 1117 aa12.17□□□□□ -0.46
ATP13A3-204ENST00000446356 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
ATP13A3-204ENST00000446356 RELBQ01201 579 aa12.15□□□□□ -0.46
ATP13A3-204ENST00000446356 HDGFL1Q5TGJ6 251 aa12.15□□□□□ -0.46
ATP13A3-204ENST00000446356 PHTF2Q8N3S3 785 aa12.15□□□□□ -0.46
ATP13A3-204ENST00000446356 POTECB2RU33 542 aa12.14□□□□□ -0.47
ATP13A3-204ENST00000446356 MAP7D1Q3KQU3 841 aa12.14□□□□□ -0.47
ATP13A3-204ENST00000446356 OXLD1Q5BKU9 147 aa12.14□□□□□ -0.47
ATP13A3-204ENST00000446356 CYP2U1Q7Z449 544 aa12.14□□□□□ -0.47
ATP13A3-204ENST00000446356 SIRT1Q96EB6 747 aa12.14□□□□□ -0.47
ATP13A3-204ENST00000446356 AGBL1Q96MI9 1066 aa12.14□□□□□ -0.47
ATP13A3-204ENST00000446356 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
ATP13A3-204ENST00000446356 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
ATP13A3-204ENST00000446356 USP4Q13107 963 aa12.13□□□□□ -0.47
ATP13A3-204ENST00000446356 PLPP7Q8NBV4 271 aa12.13□□□□□ -0.47
ATP13A3-204ENST00000446356 GLMNQ92990 594 aa12.13□□□□□ -0.47
ATP13A3-204ENST00000446356 SCTRP47872 440 aa12.12□□□□□ -0.47
ATP13A3-204ENST00000446356 TRAK2O60296 914 aa12.11□□□□□ -0.47
ATP13A3-204ENST00000446356 SKIP12755 728 aa12.11□□□□□ -0.47
ATP13A3-204ENST00000446356 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
ATP13A3-204ENST00000446356 CALR3Q96L12 384 aaKnown RBP12.11□□□□□ -0.47
ATP13A3-204ENST00000446356 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms