RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 HCLS1P14317 486 aaPredicted RBP9.3□□□□□ -0.92
SMG1-202ENST00000446231 DCTN1Q14203 1278 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 ZNF397Q8NF99 534 aaPredicted RBP9.3□□□□□ -0.92
SMG1-202ENST00000446231 UBE2HP62256 183 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 GDPD2Q9HCC8 539 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 EVC2Q86UK5 1308 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMG1-202ENST00000446231 POTEB2H3BUK9 544 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 CENPHQ9H3R5 247 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 CCDC171Q6TFL3 1326 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 CASQ1P31415 396 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 STX1AQ16623 288 aa9.3□□□□□ -0.92
SMG1-202ENST00000446231 TUBB4AP04350 444 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 CCDC91Q7Z6B0 441 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 NAP1L1P55209 391 aaKnown RBP9.29□□□□□ -0.92
SMG1-202ENST00000446231 GSDMDP57764 484 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 RASSF4Q9H2L5 321 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 SCAND2PQ9GZW5 306 aaPredicted RBP9.29□□□□□ -0.92
SMG1-202ENST00000446231 CASKIN1Q8WXD9 1431 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 MX1P20591 662 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 RASSF8Q8NHQ8 419 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 WIZO95785 1651 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 GNAI2P04899 355 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 CNTROBQ8N137 903 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 LRRCC1Q9C099 1032 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 RSPH14Q9UHP6 348 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 IBSPP21815 317 aaPredicted RBP9.29□□□□□ -0.92
SMG1-202ENST00000446231 HSP90AB4PQ58FF6 505 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 ME1P48163 572 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 GAS2L3Q86XJ1 694 aa9.29□□□□□ -0.92
SMG1-202ENST00000446231 SERPINC1P01008 464 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 PTGS1P23219 599 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 LIMCH1Q9UPQ0 1083 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 SMARCA5O60264 1052 aaPredicted RBP9.28□□□□□ -0.92
SMG1-202ENST00000446231 SRCIN1Q9C0H9 1055 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 SNW1Q13573 536 aaKnown RBP9.28□□□□□ -0.92
SMG1-202ENST00000446231 GIMAP6Q6P9H5 292 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 CFAP45Q9UL16 551 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 PIBF1Q8WXW3 757 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 A0A1B0GUL7 405 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
SMG1-202ENST00000446231 ANTXR1Q9H6X2 564 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
SMG1-202ENST00000446231 CTAGE5O15320 804 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 ROCK1Q13464 1354 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 STK38Q15208 465 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 CLGNO14967 610 aa9.28□□□□□ -0.92
SMG1-202ENST00000446231 FAM177A1Q8N128 213 aaPredicted RBP9.27□□□□□ -0.92
SMG1-202ENST00000446231 SURF6O75683 361 aaKnown RBP9.27□□□□□ -0.92
SMG1-202ENST00000446231 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
SMG1-202ENST00000446231 EIF4G1Q04637 1599 aaKnown RBP9.27□□□□□ -0.93
SMG1-202ENST00000446231 URI1O94763 535 aaPredicted RBP9.27□□□□□ -0.93
SMG1-202ENST00000446231 RNF187Q5TA31 235 aaPredicted RBP9.27□□□□□ -0.93
SMG1-202ENST00000446231 ZSCAN12O43309 604 aa9.27□□□□□ -0.93
SMG1-202ENST00000446231 ANKRD1Q15327 319 aa9.27□□□□□ -0.93
SMG1-202ENST00000446231 JAKMIP1Q96N16 626 aaKnown RBP9.27□□□□□ -0.93
SMG1-202ENST00000446231 NKTRP30414 1462 aaKnown RBP9.27□□□□□ -0.93
SMG1-202ENST00000446231 ERBINQ96RT1 1412 aa9.27□□□□□ -0.93
SMG1-202ENST00000446231 PPP6R1Q9UPN7 881 aa9.27□□□□□ -0.93
SMG1-202ENST00000446231 CCDC9Q9Y3X0 531 aaKnown RBP9.27□□□□□ -0.93
SMG1-202ENST00000446231 KDM4AO75164 1064 aa9.27□□□□□ -0.93
SMG1-202ENST00000446231 CT47A1Q5JQC4 288 aaPredicted RBP9.27□□□□□ -0.93
SMG1-202ENST00000446231 GBP3Q9H0R5 595 aa9.27□□□□□ -0.93
SMG1-202ENST00000446231 TYRO3Q06418 890 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 CCDC186Q7Z3E2 898 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 GAS2L2Q8NHY3 880 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 U2AF2P26368 475 aaKnown RBP eCLIP9.26□□□□□ -0.934e-7■■■■□ 19.5
SMG1-202ENST00000446231 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMG1-202ENST00000446231 TRIM27P14373 513 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.26□□□□□ -0.932e-7■■■□□ 14.6
SMG1-202ENST00000446231 RBM42Q9BTD8 480 aaKnown RBP9.26□□□□□ -0.93
SMG1-202ENST00000446231 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 ARHGAP29Q52LW3 1261 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 PLCD4Q9BRC7 762 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 IQCEQ6IPM2 695 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 CCT4P50991 539 aaKnown RBP9.26□□□□□ -0.93
SMG1-202ENST00000446231 GOLGA6L10A6NI86 522 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 ARFGAP3Q9NP61 516 aa9.26□□□□□ -0.93
SMG1-202ENST00000446231 AKAP17AQ02040 695 aaKnown RBP9.26□□□□□ -0.93
SMG1-202ENST00000446231 ZNF165P49910 485 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 PLEKHH1Q9ULM0 1364 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 MCM6Q14566 821 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 GPRASP1Q5JY77 1395 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 TRIM29Q14134 588 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 ERO1AQ96HE7 468 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 SPAG9O60271 1321 aaKnown RBP9.25□□□□□ -0.93
SMG1-202ENST00000446231 STX6O43752 255 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 SRRTQ9BXP5 876 aaKnown RBP9.25□□□□□ -0.93
SMG1-202ENST00000446231 CNPY2Q9Y2B0 182 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 ERICH3Q5RHP9 1530 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 LMBRD1Q9NUN5 540 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 KIAA1107Q9UPP5 1409 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 HIP1O00291 1037 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 SAFBQ15424 915 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMG1-202ENST00000446231 SMARCE1Q969G3 411 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 NAIPQ13075 1403 aa9.25□□□□□ -0.93
SMG1-202ENST00000446231 ANO10Q9NW15 660 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms