RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
SNX13-204ENST00000444712 NLRP6P59044 892 aa20.23■□□□□ 0.83
SNX13-204ENST00000444712 MAP3K19Q56UN5 1328 aa20.23■□□□□ 0.83
SNX13-204ENST00000444712 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
SNX13-204ENST00000444712 MS4A1P11836 297 aa20.22■□□□□ 0.83
SNX13-204ENST00000444712 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
SNX13-204ENST00000444712 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
SNX13-204ENST00000444712 RBM19Q9Y4C8 960 aaKnown RBP20.21■□□□□ 0.83
SNX13-204ENST00000444712 ABTB2Q8N961 1025 aa20.2■□□□□ 0.83
SNX13-204ENST00000444712 LTN1O94822 1766 aa20.2■□□□□ 0.82
SNX13-204ENST00000444712 RTL1A6NKG5 1358 aa20.2■□□□□ 0.82
SNX13-204ENST00000444712 AMPHP49418 695 aa20.2■□□□□ 0.82
SNX13-204ENST00000444712 GNAI1P63096 354 aa20.2■□□□□ 0.82
SNX13-204ENST00000444712 EXOSC9Q06265 439 aaKnown RBP20.2■□□□□ 0.82
SNX13-204ENST00000444712 TSR2Q969E8 191 aaKnown RBP20.2■□□□□ 0.82
SNX13-204ENST00000444712 HSP90AB2PQ58FF8 381 aa20.19■□□□□ 0.82
SNX13-204ENST00000444712 IFT57Q9NWB7 429 aa20.19■□□□□ 0.82
SNX13-204ENST00000444712 NCOA3Q9Y6Q9 1424 aa20.19■□□□□ 0.82
SNX13-204ENST00000444712 SULT6B1Q6IMI4 303 aa20.19■□□□□ 0.82
SNX13-204ENST00000444712 CENPQQ7L2Z9 268 aaPredicted RBP20.19■□□□□ 0.82
SNX13-204ENST00000444712 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
SNX13-204ENST00000444712 ESCO1Q5FWF5 840 aa20.18■□□□□ 0.82
SNX13-204ENST00000444712 PROSER2Q86WR7 435 aaPredicted RBP20.18■□□□□ 0.82
SNX13-204ENST00000444712 PHRF1Q9P1Y6 1649 aaKnown RBP20.18■□□□□ 0.82
SNX13-204ENST00000444712 FRAT1Q92837 279 aaPredicted RBP20.17■□□□□ 0.82
SNX13-204ENST00000444712 SOX12O15370 315 aa20.17■□□□□ 0.82
SNX13-204ENST00000444712 PSME1Q06323 249 aa20.17■□□□□ 0.82
SNX13-204ENST00000444712 KDRP35968 1356 aa20.16■□□□□ 0.82
SNX13-204ENST00000444712 DCCP43146 1447 aa20.16■□□□□ 0.82
SNX13-204ENST00000444712 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
SNX13-204ENST00000444712 ALDH1L2Q3SY69 923 aa20.15■□□□□ 0.82
SNX13-204ENST00000444712 ZKSCAN2Q63HK3 967 aa20.15■□□□□ 0.82
SNX13-204ENST00000444712 KDM2BQ8NHM5 1336 aa20.15■□□□□ 0.82
SNX13-204ENST00000444712 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
SNX13-204ENST00000444712 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
SNX13-204ENST00000444712 KIF16BQ96L93 1317 aa20.14■□□□□ 0.81
SNX13-204ENST00000444712 TRPM3Q9HCF6 1732 aaPredicted RBP20.14■□□□□ 0.81
SNX13-204ENST00000444712 KCNH5Q8NCM2 988 aa20.14■□□□□ 0.81
SNX13-204ENST00000444712 RBM33Q96EV2 1170 aaKnown RBP20.14■□□□□ 0.81
SNX13-204ENST00000444712 NFAT5O94916 1531 aa20.14■□□□□ 0.81
SNX13-204ENST00000444712 IGSF1Q8N6C5 1336 aa20.13■□□□□ 0.81
SNX13-204ENST00000444712 ZNF853P0CG23 659 aa20.13■□□□□ 0.81
SNX13-204ENST00000444712 CFAP44Q96MT7 982 aa20.13■□□□□ 0.81
SNX13-204ENST00000444712 AEBP1Q8IUX7 1158 aa20.12■□□□□ 0.81
SNX13-204ENST00000444712 STRCP1A6NGW2 1772 aa20.12■□□□□ 0.81
SNX13-204ENST00000444712 HOXC9P31274 260 aa20.12■□□□□ 0.81
SNX13-204ENST00000444712 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
SNX13-204ENST00000444712 IPO8O15397 1037 aaKnown RBP20.11■□□□□ 0.81
SNX13-204ENST00000444712 PANK1Q8TE04 598 aa20.11■□□□□ 0.81
SNX13-204ENST00000444712 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
SNX13-204ENST00000444712 C1orf167Q5SNV9 1468 aa20.11■□□□□ 0.81
SNX13-204ENST00000444712 BRPF1P55201 1214 aaPredicted RBP20.1■□□□□ 0.81
SNX13-204ENST00000444712 BCL2L13Q9BXK5 485 aa20.1■□□□□ 0.81
SNX13-204ENST00000444712 COG6Q9Y2V7 657 aa20.1■□□□□ 0.81
SNX13-204ENST00000444712 SLIT3O75094 1523 aa20.1■□□□□ 0.81
SNX13-204ENST00000444712 HAP1P54257 671 aaPredicted RBP20.1■□□□□ 0.81
SNX13-204ENST00000444712 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
SNX13-204ENST00000444712 NUTM2GQ5VZR2 741 aa20.09■□□□□ 0.81
SNX13-204ENST00000444712 DZIP1LQ8IYY4 767 aaKnown RBP20.09■□□□□ 0.81
SNX13-204ENST00000444712 SSH1Q8WYL5 1049 aa20.09■□□□□ 0.81
SNX13-204ENST00000444712 GAS2L2Q8NHY3 880 aa20.08■□□□□ 0.8
SNX13-204ENST00000444712 EYA1Q99502 592 aa20.08■□□□□ 0.8
SNX13-204ENST00000444712 MST1RQ04912 1400 aa20.08■□□□□ 0.8
SNX13-204ENST00000444712 MBIPQ9NS73 344 aa20.07■□□□□ 0.8
SNX13-204ENST00000444712 MVPQ14764 893 aaKnown RBP20.07■□□□□ 0.8
SNX13-204ENST00000444712 ATF7IPQ6VMQ6 1270 aa20.07■□□□□ 0.8
SNX13-204ENST00000444712 THUMPD2Q9BTF0 503 aaKnown RBP20.07■□□□□ 0.8
SNX13-204ENST00000444712 ATF3P18847 181 aa20.06■□□□□ 0.8
SNX13-204ENST00000444712 IP6K1Q92551 441 aa20.06■□□□□ 0.8
SNX13-204ENST00000444712 ORAI2Q96SN7 254 aa20.06■□□□□ 0.8
SNX13-204ENST00000444712 TMEM94Q12767 1356 aa20.05■□□□□ 0.8
SNX13-204ENST00000444712 ALS2Q96Q42 1657 aa20.05■□□□□ 0.8
SNX13-204ENST00000444712 HTATSF1O43719 755 aaKnown RBP20.05■□□□□ 0.8
SNX13-204ENST00000444712 RTF1Q92541 710 aaKnown RBP20.04■□□□□ 0.8
SNX13-204ENST00000444712 LRRC37A3O60309 1634 aa20.04■□□□□ 0.8
SNX13-204ENST00000444712 FOXO3O43524 673 aa20.03■□□□□ 0.8
SNX13-204ENST00000444712 VAMP4O75379 141 aa20.03■□□□□ 0.8
SNX13-204ENST00000444712 RLBP1P12271 317 aa20.03■□□□□ 0.8
SNX13-204ENST00000444712 DDX19BQ9UMR2 479 aa20.03■□□□□ 0.8
SNX13-204ENST00000444712 FAM83GA6ND36 823 aa20.03■□□□□ 0.8
SNX13-204ENST00000444712 TRIM27P14373 513 aa20.03■□□□□ 0.8
SNX13-204ENST00000444712 TWISTNBQ3B726 338 aaPredicted RBP20.02■□□□□ 0.8
SNX13-204ENST00000444712 CADPS2Q86UW7 1296 aa20.02■□□□□ 0.8
SNX13-204ENST00000444712 ARHGAP45Q92619 1136 aa20.02■□□□□ 0.8
SNX13-204ENST00000444712 NOB1Q9ULX3 412 aaKnown RBP20.02■□□□□ 0.8
SNX13-204ENST00000444712 USP19O94966 1318 aa20.02■□□□□ 0.8
SNX13-204ENST00000444712 KRT28Q7Z3Y7 464 aa20.02■□□□□ 0.79
SNX13-204ENST00000444712 KIAA0232Q92628 1395 aa20.01■□□□□ 0.79
SNX13-204ENST00000444712 STRCQ7RTU9 1775 aa20.01■□□□□ 0.79
SNX13-204ENST00000444712 LMTK3Q96Q04 1460 aa20.01■□□□□ 0.79
SNX13-204ENST00000444712 CHMP4BQ9H444 224 aaKnown RBP20.01■□□□□ 0.79
SNX13-204ENST00000444712 CHL1O00533 1208 aa20■□□□□ 0.79
SNX13-204ENST00000444712 DCTN1Q14203 1278 aa20■□□□□ 0.79
SNX13-204ENST00000444712 MTHFSDQ2M296 383 aaKnown RBP20■□□□□ 0.79
SNX13-204ENST00000444712 MSH6P52701 1360 aa20■□□□□ 0.79
SNX13-204ENST00000444712 CRB1P82279 1406 aa20■□□□□ 0.79
SNX13-204ENST00000444712 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
SNX13-204ENST00000444712 TNNQ9UQP3 1299 aa19.99■□□□□ 0.79
SNX13-204ENST00000444712 GCP02774 474 aa19.98■□□□□ 0.79
SNX13-204ENST00000444712 MCM10Q7L590 875 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms