RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 CLSPNQ9HAW4 1339 aa10.49□□□□□ -0.73
R3HDM1-210ENST00000443537 CFHP08603 1231 aa10.48□□□□□ -0.73
R3HDM1-210ENST00000443537 POTEGQ6S5H5 508 aa10.48□□□□□ -0.73
R3HDM1-210ENST00000443537 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
R3HDM1-210ENST00000443537 RIC3Q7Z5B4 369 aa10.48□□□□□ -0.73
R3HDM1-210ENST00000443537 C14orf37Q86TY3 774 aa10.48□□□□□ -0.73
R3HDM1-210ENST00000443537 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
R3HDM1-210ENST00000443537 KDM5DQ9BY66 1539 aa10.48□□□□□ -0.73
R3HDM1-210ENST00000443537 UNC13BO14795 1591 aa10.48□□□□□ -0.73
R3HDM1-210ENST00000443537 DEPDC5O75140 1603 aa10.47□□□□□ -0.73
R3HDM1-210ENST00000443537 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
R3HDM1-210ENST00000443537 WNT2BQ93097 391 aa10.47□□□□□ -0.73
R3HDM1-210ENST00000443537 ARHGEF40Q8TER5 1519 aa10.47□□□□□ -0.73
R3HDM1-210ENST00000443537 FAM135AQ9P2D6 1515 aa10.47□□□□□ -0.73
R3HDM1-210ENST00000443537 KDM6BO15054 1643 aa10.47□□□□□ -0.73
R3HDM1-210ENST00000443537 USP46P62068 366 aa10.46□□□□□ -0.73
R3HDM1-210ENST00000443537 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.73
R3HDM1-210ENST00000443537 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.73
R3HDM1-210ENST00000443537 ABCA6Q8N139 1617 aa10.46□□□□□ -0.74
R3HDM1-210ENST00000443537 RNF17Q9BXT8 1623 aaKnown RBP10.46□□□□□ -0.74
R3HDM1-210ENST00000443537 DIP2CQ9Y2E4 1556 aa10.45□□□□□ -0.74
R3HDM1-210ENST00000443537 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
R3HDM1-210ENST00000443537 POTEMA6NI47 508 aa10.45□□□□□ -0.74
R3HDM1-210ENST00000443537 CSPP1Q1MSJ5 1256 aa10.45□□□□□ -0.74
R3HDM1-210ENST00000443537 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
R3HDM1-210ENST00000443537 CDAN1Q8IWY9 1227 aa10.45□□□□□ -0.74
R3HDM1-210ENST00000443537 AFAP1Q8N556 730 aa10.45□□□□□ -0.74
R3HDM1-210ENST00000443537 CHIC2Q9UKJ5 165 aa10.45□□□□□ -0.74
R3HDM1-210ENST00000443537 A2MP01023 1474 aa10.44□□□□□ -0.74
R3HDM1-210ENST00000443537 DHX29Q7Z478 1369 aaKnown RBP10.44□□□□□ -0.74
R3HDM1-210ENST00000443537 NDUFV2P19404 249 aa10.44□□□□□ -0.74
R3HDM1-210ENST00000443537 RRP7BPQ9NSQ0 103 aa10.44□□□□□ -0.74
R3HDM1-210ENST00000443537 LIMD1Q9UGP4 676 aa10.44□□□□□ -0.74
R3HDM1-210ENST00000443537 TIMELESSQ9UNS1 1208 aa10.44□□□□□ -0.74
R3HDM1-210ENST00000443537 ZC3H13Q5T200 1668 aaKnown RBP10.44□□□□□ -0.74
R3HDM1-210ENST00000443537 IQGAP3Q86VI3 1631 aa10.44□□□□□ -0.74
R3HDM1-210ENST00000443537 AGLP35573 1532 aa10.43□□□□□ -0.74
R3HDM1-210ENST00000443537 PRDM15P57071 1507 aaPredicted RBP10.43□□□□□ -0.74
R3HDM1-210ENST00000443537 BCAMP50895 628 aa10.43□□□□□ -0.74
R3HDM1-210ENST00000443537 PPP4CP60510 307 aa10.43□□□□□ -0.74
R3HDM1-210ENST00000443537 GRIPAP1Q4V328 841 aa10.43□□□□□ -0.74
R3HDM1-210ENST00000443537 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
R3HDM1-210ENST00000443537 HPS5Q9UPZ3 1129 aa10.43□□□□□ -0.74
R3HDM1-210ENST00000443537 SOWAHBA6NEL2 793 aa10.42□□□□□ -0.74
R3HDM1-210ENST00000443537 SPTLC1O15269 473 aa10.42□□□□□ -0.74
R3HDM1-210ENST00000443537 HOXA2O43364 376 aa10.42□□□□□ -0.74
R3HDM1-210ENST00000443537 ATP10AO60312 1499 aa10.42□□□□□ -0.74
R3HDM1-210ENST00000443537 FUT2Q10981 343 aa10.41□□□□□ -0.74
R3HDM1-210ENST00000443537 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
R3HDM1-210ENST00000443537 RAPGEF3O95398 923 aa10.4□□□□□ -0.74
R3HDM1-210ENST00000443537 FDX1P10109 184 aa10.4□□□□□ -0.74
R3HDM1-210ENST00000443537 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
R3HDM1-210ENST00000443537 PRR14Q9BWN1 585 aa10.4□□□□□ -0.74
R3HDM1-210ENST00000443537 TET3O43151 1660 aa10.4□□□□□ -0.74
R3HDM1-210ENST00000443537 KANK1Q14678 1352 aa10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 DHX57Q6P158 1386 aaKnown RBP10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 VWDEQ8N2E2 1590 aa10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 NUTM2BA6NNL0 878 aaPredicted RBP10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 NUTM2EB1AL46 878 aaPredicted RBP10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 ZEB1P37275 1124 aaPredicted RBP10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 NUTM2DQ5VT03 806 aaPredicted RBP10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 NUTM2AQ8IVF1 878 aaPredicted RBP10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 TSR3Q9UJK0 312 aaKnown RBP10.39□□□□□ -0.75
R3HDM1-210ENST00000443537 GJA5P36382 358 aa10.38□□□□□ -0.75
R3HDM1-210ENST00000443537 ATP6V1AP38606 617 aa10.38□□□□□ -0.75
R3HDM1-210ENST00000443537 CCER1Q8TC90 406 aaPredicted RBP10.38□□□□□ -0.75
R3HDM1-210ENST00000443537 HLA-CQ95604 372 aa10.38□□□□□ -0.75
R3HDM1-210ENST00000443537 KCTD12Q96CX2 325 aaKnown RBP10.38□□□□□ -0.75
R3HDM1-210ENST00000443537 LMTK2Q8IWU2 1503 aa10.38□□□□□ -0.75
R3HDM1-210ENST00000443537 COL17A1Q9UMD9 1497 aaPredicted RBP10.37□□□□□ -0.75
R3HDM1-210ENST00000443537 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
R3HDM1-210ENST00000443537 TUSC1Q2TAM9 212 aa10.37□□□□□ -0.75
R3HDM1-210ENST00000443537 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
R3HDM1-210ENST00000443537 MROH1Q8NDA8 1641 aa10.36□□□□□ -0.75
R3HDM1-210ENST00000443537 RPRD2Q5VT52 1461 aaKnown RBP10.36□□□□□ -0.75
R3HDM1-210ENST00000443537 YEATS2Q9ULM3 1422 aa10.36□□□□□ -0.75
R3HDM1-210ENST00000443537 ACTN4O43707 911 aaKnown RBP10.36□□□□□ -0.75
R3HDM1-210ENST00000443537 FLIIQ13045 1269 aa10.36□□□□□ -0.75
R3HDM1-210ENST00000443537 NUP155O75694 1391 aa10.36□□□□□ -0.75
R3HDM1-210ENST00000443537 PZPP20742 1482 aa10.36□□□□□ -0.75
R3HDM1-210ENST00000443537 RFC5P40937 340 aa10.35□□□□□ -0.75
R3HDM1-210ENST00000443537 QPCTQ16769 361 aa10.35□□□□□ -0.75
R3HDM1-210ENST00000443537 PUS10Q3MIT2 529 aaKnown RBP10.35□□□□□ -0.75
R3HDM1-210ENST00000443537 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
R3HDM1-210ENST00000443537 TRIM52Q96A61 297 aa10.35□□□□□ -0.75
R3HDM1-210ENST00000443537 ZBTB3Q9H5J0 574 aa10.35□□□□□ -0.75
R3HDM1-210ENST00000443537 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
R3HDM1-210ENST00000443537 WBP1LQ9NX94 342 aa10.34□□□□□ -0.75
R3HDM1-210ENST00000443537 EFCAB6Q5THR3 1501 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 CEP152O94986 1710 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 C6orf229H3BNL8 230 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 KIF3BO15066 747 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 LILRB3O75022 631 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 APLP1P51693 650 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 PRPF38BQ5VTL8 546 aaKnown RBP10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 MPHOSPH9Q99550 1183 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 SPHKAPQ2M3C7 1700 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 CAMSAP1Q5T5Y3 1602 aa10.33□□□□□ -0.76
R3HDM1-210ENST00000443537 MROH2AA6NES4 1674 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms