RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 PHACTR3Q96KR7 559 aa24.55■■□□□ 1.52
POLR1E-203ENST00000442009 ATF3P18847 181 aa24.54■■□□□ 1.52
POLR1E-203ENST00000442009 PPP4R2Q9NY27 417 aa24.54■■□□□ 1.52
POLR1E-203ENST00000442009 NUTM2GQ5VZR2 741 aa24.54■■□□□ 1.52
POLR1E-203ENST00000442009 SOX12O15370 315 aa24.53■■□□□ 1.52
POLR1E-203ENST00000442009 RIPK4P57078 832 aa24.52■■□□□ 1.52
POLR1E-203ENST00000442009 NFAT5O94916 1531 aa24.52■■□□□ 1.52
POLR1E-203ENST00000442009 CADPS2Q86UW7 1296 aa24.51■■□□□ 1.51
POLR1E-203ENST00000442009 IL16Q14005 1332 aa24.51■■□□□ 1.51
POLR1E-203ENST00000442009 NFE2L2Q16236 605 aa24.5■■□□□ 1.51
POLR1E-203ENST00000442009 MSH6P52701 1360 aa24.48■■□□□ 1.51
POLR1E-203ENST00000442009 PHRF1Q9P1Y6 1649 aaKnown RBP24.48■■□□□ 1.51
POLR1E-203ENST00000442009 AMPHP49418 695 aa24.48■■□□□ 1.51
POLR1E-203ENST00000442009 KRT28Q7Z3Y7 464 aa24.48■■□□□ 1.51
POLR1E-203ENST00000442009 LTN1O94822 1766 aa24.48■■□□□ 1.51
POLR1E-203ENST00000442009 ARHGEF10O15013 1369 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 SLIT3O75094 1523 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 DLG5Q8TDM6 1919 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 NEFMP07197 916 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 HOXC9P31274 260 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 RTL1A6NKG5 1358 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 SULT6B1Q6IMI4 303 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 AEBP1Q8IUX7 1158 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 MYH16Q9H6N6 1097 aa24.47■■□□□ 1.51
POLR1E-203ENST00000442009 ZNF335Q9H4Z2 1342 aaPredicted RBP24.46■■□□□ 1.51
POLR1E-203ENST00000442009 ALS2Q96Q42 1657 aa24.46■■□□□ 1.51
POLR1E-203ENST00000442009 KDRP35968 1356 aa24.46■■□□□ 1.51
POLR1E-203ENST00000442009 XPCQ01831 940 aaPredicted RBP24.45■■□□□ 1.5
POLR1E-203ENST00000442009 KCNH5Q8NCM2 988 aa24.45■■□□□ 1.5
POLR1E-203ENST00000442009 USP19O94966 1318 aa24.44■■□□□ 1.5
POLR1E-203ENST00000442009 IGSF1Q8N6C5 1336 aa24.44■■□□□ 1.5
POLR1E-203ENST00000442009 PLIN1O60240 522 aa24.43■■□□□ 1.5
POLR1E-203ENST00000442009 IP6K1Q92551 441 aa24.42■■□□□ 1.5
POLR1E-203ENST00000442009 EYA1Q99502 592 aa24.42■■□□□ 1.5
POLR1E-203ENST00000442009 FANCIQ9NVI1 1328 aa24.41■■□□□ 1.5
POLR1E-203ENST00000442009 GCP02774 474 aa24.4■■□□□ 1.5
POLR1E-203ENST00000442009 NPHP3Q7Z494 1330 aa24.38■■□□□ 1.49
POLR1E-203ENST00000442009 BCAR3O75815 825 aa24.38■■□□□ 1.49
POLR1E-203ENST00000442009 CT47B1P0C2W7 299 aaPredicted RBP24.38■■□□□ 1.49
POLR1E-203ENST00000442009 ARHGEF25Q86VW2 580 aa24.38■■□□□ 1.49
POLR1E-203ENST00000442009 EXOC6Q8TAG9 804 aa24.38■■□□□ 1.49
POLR1E-203ENST00000442009 PXDNQ92626 1479 aa24.37■■□□□ 1.49
POLR1E-203ENST00000442009 RARSP54136 660 aaKnown RBP24.37■■□□□ 1.49
POLR1E-203ENST00000442009 TSR2Q969E8 191 aaKnown RBP24.37■■□□□ 1.49
POLR1E-203ENST00000442009 LMOD3Q0VAK6 560 aa24.36■■□□□ 1.49
POLR1E-203ENST00000442009 MED1Q15648 1581 aaPredicted RBP24.36■■□□□ 1.49
POLR1E-203ENST00000442009 ZNF853P0CG23 659 aa24.35■■□□□ 1.49
POLR1E-203ENST00000442009 B4GALNT3Q6L9W6 998 aa24.35■■□□□ 1.49
POLR1E-203ENST00000442009 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.35■■□□□ 1.49
POLR1E-203ENST00000442009 CALD1Q05682 793 aaKnown RBP24.35■■□□□ 1.49
POLR1E-203ENST00000442009 C20orf194Q5TEA3 1177 aa24.35■■□□□ 1.49
POLR1E-203ENST00000442009 DDX17Q92841 729 aaKnown RBP24.35■■□□□ 1.49
POLR1E-203ENST00000442009 BRINP3Q76B58 766 aa24.34■■□□□ 1.49
POLR1E-203ENST00000442009 EXOSC9Q06265 439 aaKnown RBP24.33■■□□□ 1.48
POLR1E-203ENST00000442009 THUMPD2Q9BTF0 503 aaKnown RBP24.32■■□□□ 1.48
POLR1E-203ENST00000442009 IFT57Q9NWB7 429 aa24.32■■□□□ 1.48
POLR1E-203ENST00000442009 SLAIN2Q9P270 581 aa24.32■■□□□ 1.48
POLR1E-203ENST00000442009 LMOD2Q6P5Q4 547 aa24.31■■□□□ 1.48
POLR1E-203ENST00000442009 PELP1Q8IZL8 1130 aaKnown RBP24.31■■□□□ 1.48
POLR1E-203ENST00000442009 CRBNQ96SW2 442 aa24.31■■□□□ 1.48
POLR1E-203ENST00000442009 TNS3Q68CZ2 1445 aa24.3■■□□□ 1.48
POLR1E-203ENST00000442009 SPATA31A3Q5VYP0 1347 aa24.3■■□□□ 1.48
POLR1E-203ENST00000442009 FAM83GA6ND36 823 aa24.29■■□□□ 1.48
POLR1E-203ENST00000442009 CRYBG1Q9Y4K1 1723 aa24.29■■□□□ 1.48
POLR1E-203ENST00000442009 GNAI1P63096 354 aa24.28■■□□□ 1.48
POLR1E-203ENST00000442009 MTHFSDQ2M296 383 aaKnown RBP24.28■■□□□ 1.48
POLR1E-203ENST00000442009 CFAP44Q96MT7 982 aa24.28■■□□□ 1.48
POLR1E-203ENST00000442009 NCAPD2Q15021 1401 aa24.27■■□□□ 1.48
POLR1E-203ENST00000442009 PDE3AQ14432 1141 aa24.27■■□□□ 1.48
POLR1E-203ENST00000442009 LTV1Q96GA3 475 aaPredicted RBP24.27■■□□□ 1.48
POLR1E-203ENST00000442009 RGPD2P0DJD1 1756 aa24.27■■□□□ 1.48
POLR1E-203ENST00000442009 NBPF6Q5VWK0 638 aa24.26■■□□□ 1.47
POLR1E-203ENST00000442009 CCDC136Q96JN2 1154 aa24.26■■□□□ 1.47
POLR1E-203ENST00000442009 NBPF4Q96M43 638 aa24.26■■□□□ 1.47
POLR1E-203ENST00000442009 DCTN1Q14203 1278 aa24.26■■□□□ 1.47
POLR1E-203ENST00000442009 SOS2Q07890 1332 aaPredicted RBP24.26■■□□□ 1.47
POLR1E-203ENST00000442009 GAS2L2Q8NHY3 880 aa24.24■■□□□ 1.47
POLR1E-203ENST00000442009 MBIPQ9NS73 344 aa24.24■■□□□ 1.47
POLR1E-203ENST00000442009 COL18A1P39060 1754 aa24.24■■□□□ 1.47
POLR1E-203ENST00000442009 AXIN2Q9Y2T1 843 aa24.24■■□□□ 1.47
POLR1E-203ENST00000442009 CAMTA1Q9Y6Y1 1673 aa24.23■■□□□ 1.47
POLR1E-203ENST00000442009 RGPD5Q99666 1765 aa24.23■■□□□ 1.47
POLR1E-203ENST00000442009 CRB1P82279 1406 aa24.23■■□□□ 1.47
POLR1E-203ENST00000442009 HTATSF1O43719 755 aaKnown RBP24.22■■□□□ 1.47
POLR1E-203ENST00000442009 ZNF428Q96B54 188 aa24.21■■□□□ 1.47
POLR1E-203ENST00000442009 CHL1O00533 1208 aa24.21■■□□□ 1.47
POLR1E-203ENST00000442009 MCM10Q7L590 875 aa24.21■■□□□ 1.47
POLR1E-203ENST00000442009 LAS1LQ9Y4W2 734 aaKnown RBP24.21■■□□□ 1.47
POLR1E-203ENST00000442009 SSH1Q8WYL5 1049 aa24.2■■□□□ 1.46
POLR1E-203ENST00000442009 USHBP1Q8N6Y0 703 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 ABCC6O95255 1503 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 NHSL1Q5SYE7 1610 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 ZBTB7CA1YPR0 619 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 VAMP4O75379 141 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 ZC3H6P61129 1189 aaKnown RBP24.19■■□□□ 1.46
POLR1E-203ENST00000442009 ALDH1L2Q3SY69 923 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 ANKRD24Q8TF21 1146 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 BCL2L13Q9BXK5 485 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 LMO7Q8WWI1 1683 aa24.19■■□□□ 1.46
POLR1E-203ENST00000442009 BRPF1P55201 1214 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms