RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SLFNL1Q499Z3 407 aa6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 ANKMY2Q8IV38 441 aa6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 PLPP7Q8NBV4 271 aa6.47□□□□□ -1.37
CDC42BPA-207ENST00000441725 OCSTAMPQ9BR26 566 aa6.47□□□□□ -1.37
CDC42BPA-207ENST00000441725 ZC3H4Q9UPT8 1303 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-207ENST00000441725 RNF135Q8IUD6 432 aa6.47□□□□□ -1.37
CDC42BPA-207ENST00000441725 PHTF2Q8N3S3 785 aa6.47□□□□□ -1.37
CDC42BPA-207ENST00000441725 CDCA7Q9BWT1 371 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-207ENST00000441725 MARSP56192 900 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-207ENST00000441725 CLDN10P78369 228 aa6.46□□□□□ -1.38
CDC42BPA-207ENST00000441725 DPYDQ12882 1025 aa6.46□□□□□ -1.38
CDC42BPA-207ENST00000441725 OGFOD1Q8N543 542 aa6.46□□□□□ -1.38
CDC42BPA-207ENST00000441725 ZNF594Q96JF6 807 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-207ENST00000441725 BCL2L13Q9BXK5 485 aa6.46□□□□□ -1.38
CDC42BPA-207ENST00000441725 PTPRNQ16849 979 aa6.45□□□□□ -1.38
CDC42BPA-207ENST00000441725 BRICD5Q6PL45 260 aa6.45□□□□□ -1.38
CDC42BPA-207ENST00000441725 SIRT1Q96EB6 747 aa6.45□□□□□ -1.38
CDC42BPA-207ENST00000441725 CTHP32929 405 aa6.45□□□□□ -1.38
CDC42BPA-207ENST00000441725 SWI5Q1ZZU3 235 aa6.45□□□□□ -1.38
CDC42BPA-207ENST00000441725 BIN2Q9UBW5 565 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-207ENST00000441725 TSR3Q9UJK0 312 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-207ENST00000441725 TSGA10IPQ3SY00 556 aa6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 GIPC2Q8TF65 315 aa6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 WBP1LQ9NX94 342 aa6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 HPS5Q9UPZ3 1129 aa6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 PCDHB9Q9Y5E1 797 aa6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 TRAF7Q6Q0C0 670 aa6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 NYAP1Q6ZVC0 841 aa6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 CHIC2Q9UKJ5 165 aa6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 SALL2Q9Y467 1007 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-207ENST00000441725 ANKRD33BA6NCL7 494 aa6.43□□□□□ -1.38
CDC42BPA-207ENST00000441725 JUNDP17535 347 aa6.43□□□□□ -1.38
CDC42BPA-207ENST00000441725 EML3Q32P44 896 aa6.43□□□□□ -1.38
CDC42BPA-207ENST00000441725 NPAS4Q8IUM7 802 aa6.43□□□□□ -1.38
CDC42BPA-207ENST00000441725 SCUBE3Q8IX30 993 aa6.43□□□□□ -1.38
CDC42BPA-207ENST00000441725 THAP11Q96EK4 314 aa6.43□□□□□ -1.38
CDC42BPA-207ENST00000441725 KIAA1024Q9UPX6 916 aa6.43□□□□□ -1.38
CDC42BPA-207ENST00000441725 GPSM3Q9Y4H4 160 aa6.43□□□□□ -1.38
CDC42BPA-207ENST00000441725 LZTS3O60299 673 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-207ENST00000441725 PTK2Q05397 1052 aa6.42□□□□□ -1.38
CDC42BPA-207ENST00000441725 PDXDC2PQ6P474 469 aa6.42□□□□□ -1.38
CDC42BPA-207ENST00000441725 PRMT3O60678 531 aa6.42□□□□□ -1.38
CDC42BPA-207ENST00000441725 DKK1O94907 266 aa6.42□□□□□ -1.38
CDC42BPA-207ENST00000441725 C1orf216Q8TAB5 229 aa6.42□□□□□ -1.38
CDC42BPA-207ENST00000441725 PPP4CP60510 307 aa6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 MAP7D1Q3KQU3 841 aa6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 DNAAF2Q9NVR5 837 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 PLA2G2EQ9NZK7 142 aa6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 FMNL1O95466 1100 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 ABL1P00519 1130 aa6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 OCLNQ16625 522 aa6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 ADAM32Q8TC27 787 aa6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 ZNF592Q92610 1267 aa6.41□□□□□ -1.38
CDC42BPA-207ENST00000441725 CCNYL3P0C7X3 344 aa6.4□□□□□ -1.38
CDC42BPA-207ENST00000441725 ZNF211Q13398 564 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-207ENST00000441725 EVA1BQ9NVM1 165 aa6.4□□□□□ -1.38
CDC42BPA-207ENST00000441725 ZBTB7BO15156 539 aaPredicted RBP6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 TCF3P15923 654 aa6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 ATP1A2P50993 1020 aa6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 APLP1P51693 650 aa6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 SIX5Q8N196 739 aa6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 PRIMPOLQ96LW4 560 aa6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 PRR14Q9BWN1 585 aa6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 ANO2Q9NQ90 1003 aa6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 NOD1Q9Y239 953 aa6.4□□□□□ -1.39
CDC42BPA-207ENST00000441725 H3BRB1 525 aa6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 TAGLNQ01995 201 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 TAS1R3Q7RTX0 852 aa6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 TRIM50Q86XT4 487 aa6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 LARGE2Q8N3Y3 721 aa6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 GPKOWQ92917 476 aaPredicted RBP eCLIP6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 NUDT12Q9BQG2 462 aa6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 TUT1Q9H6E5 874 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 CXXC1Q9P0U4 656 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-207ENST00000441725 LGR5O75473 907 aa6.38□□□□□ -1.39
CDC42BPA-207ENST00000441725 NBPF14Q5TI25 921 aa6.38□□□□□ -1.39
CDC42BPA-207ENST00000441725 ARMC2Q8NEN0 867 aa6.38□□□□□ -1.39
CDC42BPA-207ENST00000441725 CCDC85AQ96PX6 553 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-207ENST00000441725 ARHGAP9Q9BRR9 750 aa6.38□□□□□ -1.39
CDC42BPA-207ENST00000441725 DOLKQ9UPQ8 538 aa6.38□□□□□ -1.39
CDC42BPA-207ENST00000441725 ITGBL1O95965 494 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 SEC13P55735 322 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 GTF2IP78347 998 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 OXLD1Q5BKU9 147 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 PRDM9Q9NQV7 894 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 EGFL7Q9UHF1 273 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 PCDHB3Q9Y5E6 796 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 SFI1A8K8P3 1242 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 ICMTO60725 284 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 NR1I2O75469 434 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 DXOO77932 396 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 CCDC102BQ68D86 513 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 FBXO33Q7Z6M2 555 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 ZBTB33Q86T24 672 aa6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 FAM160A2Q8N612 972 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-207ENST00000441725 ECM1Q16610 540 aa6.36□□□□□ -1.39
CDC42BPA-207ENST00000441725 ZNF326Q5BKZ1 582 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-207ENST00000441725 IFFO2Q5TF58 517 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms