RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
LIMD1-202ENST00000440097 CLUAP1Q96AJ1 413 aa18.13■□□□□ 0.49
LIMD1-202ENST00000440097 NUTM2GQ5VZR2 741 aa18.13■□□□□ 0.49
LIMD1-202ENST00000440097 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
LIMD1-202ENST00000440097 TNNQ9UQP3 1299 aa18.13■□□□□ 0.49
LIMD1-202ENST00000440097 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
LIMD1-202ENST00000440097 NFE2L2Q16236 605 aa18.12■□□□□ 0.49
LIMD1-202ENST00000440097 DDRGK1Q96HY6 314 aa18.12■□□□□ 0.49
LIMD1-202ENST00000440097 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
LIMD1-202ENST00000440097 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
LIMD1-202ENST00000440097 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
LIMD1-202ENST00000440097 NLRP6P59044 892 aa18.11■□□□□ 0.49
LIMD1-202ENST00000440097 TTC21AQ8NDW8 1320 aa18.11■□□□□ 0.49
LIMD1-202ENST00000440097 GSE1Q14687 1217 aa18.11■□□□□ 0.49
LIMD1-202ENST00000440097 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
LIMD1-202ENST00000440097 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
LIMD1-202ENST00000440097 SULT6B1Q6IMI4 303 aa18.1■□□□□ 0.49
LIMD1-202ENST00000440097 RGPD8O14715 1765 aaPredicted RBP18.1■□□□□ 0.49
LIMD1-202ENST00000440097 XRN1Q8IZH2 1706 aaKnown RBP18.1■□□□□ 0.49
LIMD1-202ENST00000440097 CENPQQ7L2Z9 268 aaPredicted RBP18.09■□□□□ 0.49
LIMD1-202ENST00000440097 OVOS2A0A0J9YW53 1432 aa18.09■□□□□ 0.49
LIMD1-202ENST00000440097 OVOS2Q6IE36 1432 aa18.09■□□□□ 0.49
LIMD1-202ENST00000440097 IL16Q14005 1332 aa18.09■□□□□ 0.49
LIMD1-202ENST00000440097 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
LIMD1-202ENST00000440097 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
LIMD1-202ENST00000440097 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
LIMD1-202ENST00000440097 AMPHP49418 695 aa18.08■□□□□ 0.49
LIMD1-202ENST00000440097 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.49
LIMD1-202ENST00000440097 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.49
LIMD1-202ENST00000440097 NFKBIBQ15653 356 aa18.08■□□□□ 0.48
LIMD1-202ENST00000440097 ABTB2Q8N961 1025 aa18.08■□□□□ 0.48
LIMD1-202ENST00000440097 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
LIMD1-202ENST00000440097 SLC4A3P48751 1232 aa18.07■□□□□ 0.48
LIMD1-202ENST00000440097 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
LIMD1-202ENST00000440097 MAP3K19Q56UN5 1328 aa18.07■□□□□ 0.48
LIMD1-202ENST00000440097 CT47B1P0C2W7 299 aaPredicted RBP18.06■□□□□ 0.48
LIMD1-202ENST00000440097 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
LIMD1-202ENST00000440097 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
LIMD1-202ENST00000440097 RLBP1P12271 317 aa18.05■□□□□ 0.48
LIMD1-202ENST00000440097 LMOD3Q0VAK6 560 aa18.05■□□□□ 0.48
LIMD1-202ENST00000440097 FAM83GA6ND36 823 aa18.05■□□□□ 0.48
LIMD1-202ENST00000440097 SSH1Q8WYL5 1049 aa18.05■□□□□ 0.48
LIMD1-202ENST00000440097 PHF8Q9UPP1 1060 aa18.05■□□□□ 0.48
LIMD1-202ENST00000440097 ANKARQ7Z5J8 1434 aa18.05■□□□□ 0.48
LIMD1-202ENST00000440097 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
LIMD1-202ENST00000440097 SSH2Q76I76 1423 aa18.04■□□□□ 0.48
LIMD1-202ENST00000440097 NPHP4O75161 1426 aaPredicted RBP18.04■□□□□ 0.48
LIMD1-202ENST00000440097 ZNF142P52746 1687 aaPredicted RBP18.04■□□□□ 0.48
LIMD1-202ENST00000440097 ELL2O00472 640 aaPredicted RBP18.03■□□□□ 0.48
LIMD1-202ENST00000440097 USP31Q70CQ4 1352 aa18.03■□□□□ 0.48
LIMD1-202ENST00000440097 IGHDP01880 384 aa18.03■□□□□ 0.48
LIMD1-202ENST00000440097 RGS3P49796 1198 aa18.02■□□□□ 0.48
LIMD1-202ENST00000440097 GNAI1P63096 354 aa18.02■□□□□ 0.48
LIMD1-202ENST00000440097 PSME1Q06323 249 aa18.02■□□□□ 0.48
LIMD1-202ENST00000440097 DZIP1LQ8IYY4 767 aaKnown RBP18.02■□□□□ 0.48
LIMD1-202ENST00000440097 KDM4FA0A1W2PPD8 638 aa18.01■□□□□ 0.47
LIMD1-202ENST00000440097 ZBTB7CA1YPR0 619 aa18.01■□□□□ 0.47
LIMD1-202ENST00000440097 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
LIMD1-202ENST00000440097 FLT4P35916 1363 aa18■□□□□ 0.47
LIMD1-202ENST00000440097 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
LIMD1-202ENST00000440097 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
LIMD1-202ENST00000440097 DAXXQ9UER7 740 aaPredicted RBP18■□□□□ 0.47
LIMD1-202ENST00000440097 ITPRIPQ8IWB1 547 aa17.99■□□□□ 0.47
LIMD1-202ENST00000440097 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
LIMD1-202ENST00000440097 IFT57Q9NWB7 429 aa17.99■□□□□ 0.47
LIMD1-202ENST00000440097 SBNO1A3KN83 1393 aa17.99■□□□□ 0.47
LIMD1-202ENST00000440097 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
LIMD1-202ENST00000440097 TRIM27P14373 513 aa17.99■□□□□ 0.47
LIMD1-202ENST00000440097 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
LIMD1-202ENST00000440097 PROSER2Q86WR7 435 aaPredicted RBP17.98■□□□□ 0.47
LIMD1-202ENST00000440097 NALCNQ8IZF0 1738 aa17.98■□□□□ 0.47
LIMD1-202ENST00000440097 MVPQ14764 893 aaKnown RBP17.98■□□□□ 0.47
LIMD1-202ENST00000440097 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
LIMD1-202ENST00000440097 XPCQ01831 940 aaPredicted RBP17.97■□□□□ 0.47
LIMD1-202ENST00000440097 KIF16BQ96L93 1317 aa17.97■□□□□ 0.47
LIMD1-202ENST00000440097 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
LIMD1-202ENST00000440097 MCM10Q7L590 875 aa17.97■□□□□ 0.47
LIMD1-202ENST00000440097 PEAK1Q9H792 1746 aa17.97■□□□□ 0.47
LIMD1-202ENST00000440097 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
LIMD1-202ENST00000440097 ADGRL3Q9HAR2 1447 aa17.96■□□□□ 0.47
LIMD1-202ENST00000440097 PIK3C2AO00443 1686 aa17.96■□□□□ 0.47
LIMD1-202ENST00000440097 FOXO3O43524 673 aa17.96■□□□□ 0.47
LIMD1-202ENST00000440097 TSPYL6Q8N831 410 aa17.96■□□□□ 0.47
LIMD1-202ENST00000440097 ORAI2Q96SN7 254 aa17.95■□□□□ 0.46
LIMD1-202ENST00000440097 TWISTNBQ3B726 338 aaPredicted RBP17.95■□□□□ 0.46
LIMD1-202ENST00000440097 EYA1Q99502 592 aa17.95■□□□□ 0.46
LIMD1-202ENST00000440097 ALDH1L2Q3SY69 923 aa17.94■□□□□ 0.46
LIMD1-202ENST00000440097 UBE2Q2Q8WVN8 375 aa17.94■□□□□ 0.46
LIMD1-202ENST00000440097 RTF1Q92541 710 aaKnown RBP17.94■□□□□ 0.46
LIMD1-202ENST00000440097 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
LIMD1-202ENST00000440097 HOXC9P31274 260 aa17.94■□□□□ 0.46
LIMD1-202ENST00000440097 EIF5BO60841 1220 aaKnown RBP17.93■□□□□ 0.46
LIMD1-202ENST00000440097 DLG5Q8TDM6 1919 aa17.93■□□□□ 0.46
LIMD1-202ENST00000440097 VAMP4O75379 141 aa17.93■□□□□ 0.46
LIMD1-202ENST00000440097 AAMPQ13685 434 aa17.93■□□□□ 0.46
LIMD1-202ENST00000440097 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
LIMD1-202ENST00000440097 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
LIMD1-202ENST00000440097 C8orf58Q8NAV2 365 aa17.92■□□□□ 0.46
LIMD1-202ENST00000440097 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
LIMD1-202ENST00000440097 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms