RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 NFAT5O94916 1531 aa25.8■■□□□ 1.72
APTR-204ENST00000440088 TMPOP42166 694 aaKnown RBP25.8■■□□□ 1.72
APTR-204ENST00000440088 E9PSI1 815 aa25.8■■□□□ 1.72
APTR-204ENST00000440088 DUSP27Q5VZP5 1158 aa25.8■■□□□ 1.72
APTR-204ENST00000440088 SLAIN2Q9P270 581 aa25.8■■□□□ 1.72
APTR-204ENST00000440088 ALS2Q96Q42 1657 aa25.79■■□□□ 1.72
APTR-204ENST00000440088 RTL1A6NKG5 1358 aa25.79■■□□□ 1.72
APTR-204ENST00000440088 BRINP3Q76B58 766 aa25.78■■□□□ 1.72
APTR-204ENST00000440088 LTN1O94822 1766 aa25.78■■□□□ 1.72
APTR-204ENST00000440088 SLIT3O75094 1523 aa25.78■■□□□ 1.72
APTR-204ENST00000440088 HOXC9P31274 260 aa25.78■■□□□ 1.72
APTR-204ENST00000440088 WDR63Q8IWG1 891 aa25.78■■□□□ 1.72
APTR-204ENST00000440088 DDX17Q92841 729 aaKnown RBP25.78■■□□□ 1.72
APTR-204ENST00000440088 TRMT2AQ8IZ69 625 aaKnown RBP25.77■■□□□ 1.72
APTR-204ENST00000440088 RGPD1P0DJD0 1748 aa25.77■■□□□ 1.72
APTR-204ENST00000440088 USP19O94966 1318 aa25.77■■□□□ 1.72
APTR-204ENST00000440088 RCAN3Q9UKA8 241 aa25.76■■□□□ 1.72
APTR-204ENST00000440088 GCP02774 474 aa25.76■■□□□ 1.71
APTR-204ENST00000440088 SPINK5Q9NQ38 1064 aaPredicted RBP25.75■■□□□ 1.71
APTR-204ENST00000440088 PXDNQ92626 1479 aa25.75■■□□□ 1.71
APTR-204ENST00000440088 RIPK4P57078 832 aa25.74■■□□□ 1.71
APTR-204ENST00000440088 SULT6B1Q6IMI4 303 aa25.74■■□□□ 1.71
APTR-204ENST00000440088 RNF123Q5XPI4 1314 aa25.74■■□□□ 1.71
APTR-204ENST00000440088 ARHGEF10O15013 1369 aa25.74■■□□□ 1.71
APTR-204ENST00000440088 TNS3Q68CZ2 1445 aa25.73■■□□□ 1.71
APTR-204ENST00000440088 PHACTR3Q96KR7 559 aa25.73■■□□□ 1.71
APTR-204ENST00000440088 PHRF1Q9P1Y6 1649 aaKnown RBP25.72■■□□□ 1.71
APTR-204ENST00000440088 IP6K1Q92551 441 aa25.72■■□□□ 1.71
APTR-204ENST00000440088 TRIM35Q9UPQ4 493 aa25.71■■□□□ 1.71
APTR-204ENST00000440088 NFE2L2Q16236 605 aa25.71■■□□□ 1.71
APTR-204ENST00000440088 AEBP1Q8IUX7 1158 aa25.71■■□□□ 1.71
APTR-204ENST00000440088 SPATA31A3Q5VYP0 1347 aa25.69■■□□□ 1.7
APTR-204ENST00000440088 ARHGEF25Q86VW2 580 aa25.69■■□□□ 1.7
APTR-204ENST00000440088 IGSF1Q8N6C5 1336 aa25.69■■□□□ 1.7
APTR-204ENST00000440088 PLEKHG5O94827 1062 aa25.68■■□□□ 1.7
APTR-204ENST00000440088 EYA1Q99502 592 aa25.68■■□□□ 1.7
APTR-204ENST00000440088 KDRP35968 1356 aa25.68■■□□□ 1.7
APTR-204ENST00000440088 IRX6P78412 446 aaPredicted RBP25.68■■□□□ 1.7
APTR-204ENST00000440088 MED1Q15648 1581 aaPredicted RBP25.67■■□□□ 1.7
APTR-204ENST00000440088 ZBTB7CA1YPR0 619 aa25.66■■□□□ 1.7
APTR-204ENST00000440088 MYH16Q9H6N6 1097 aa25.66■■□□□ 1.7
APTR-204ENST00000440088 LTBP4Q8N2S1 1624 aa25.65■■□□□ 1.7
APTR-204ENST00000440088 SOS2Q07890 1332 aaPredicted RBP25.65■■□□□ 1.7
APTR-204ENST00000440088 IL16Q14005 1332 aa25.64■■□□□ 1.7
APTR-204ENST00000440088 ERICH6BQ5W0A0 696 aa25.64■■□□□ 1.69
APTR-204ENST00000440088 LTV1Q96GA3 475 aaPredicted RBP25.64■■□□□ 1.69
APTR-204ENST00000440088 RRP1P56182 461 aaKnown RBP25.63■■□□□ 1.69
APTR-204ENST00000440088 LMOD3Q0VAK6 560 aa25.63■■□□□ 1.69
APTR-204ENST00000440088 DLG5Q8TDM6 1919 aa25.61■■□□□ 1.69
APTR-204ENST00000440088 NHSL1Q5SYE7 1610 aa25.6■■□□□ 1.69
APTR-204ENST00000440088 ZC3H6P61129 1189 aaKnown RBP25.59■■□□□ 1.69
APTR-204ENST00000440088 CALD1Q05682 793 aaKnown RBP25.59■■□□□ 1.69
APTR-204ENST00000440088 CRYBG1Q9Y4K1 1723 aa25.58■■□□□ 1.69
APTR-204ENST00000440088 CABLES1Q8TDN4 633 aa25.57■■□□□ 1.68
APTR-204ENST00000440088 FANCIQ9NVI1 1328 aa25.56■■□□□ 1.68
APTR-204ENST00000440088 NBPF6Q5VWK0 638 aa25.54■■□□□ 1.68
APTR-204ENST00000440088 ANKRD24Q8TF21 1146 aa25.54■■□□□ 1.68
APTR-204ENST00000440088 NBPF4Q96M43 638 aa25.54■■□□□ 1.68
APTR-204ENST00000440088 AXIN2Q9Y2T1 843 aa25.54■■□□□ 1.68
APTR-204ENST00000440088 TSR2Q969E8 191 aaKnown RBP25.53■■□□□ 1.68
APTR-204ENST00000440088 GAS2L2Q8NHY3 880 aa25.53■■□□□ 1.68
APTR-204ENST00000440088 CPDO75976 1380 aa25.52■■□□□ 1.68
APTR-204ENST00000440088 MTHFSDQ2M296 383 aaKnown RBP25.52■■□□□ 1.68
APTR-204ENST00000440088 USHBP1Q8N6Y0 703 aa25.52■■□□□ 1.68
APTR-204ENST00000440088 ABCC6O95255 1503 aa25.52■■□□□ 1.68
APTR-204ENST00000440088 THUMPD2Q9BTF0 503 aaKnown RBP25.51■■□□□ 1.67
APTR-204ENST00000440088 ROBO1Q9Y6N7 1651 aa25.51■■□□□ 1.67
APTR-204ENST00000440088 RGPD2P0DJD1 1756 aa25.5■■□□□ 1.67
APTR-204ENST00000440088 RGPD5Q99666 1765 aa25.5■■□□□ 1.67
APTR-204ENST00000440088 ERBB3P21860 1342 aa25.5■■□□□ 1.67
APTR-204ENST00000440088 FAM83GA6ND36 823 aa25.5■■□□□ 1.67
APTR-204ENST00000440088 CT47B1P0C2W7 299 aaPredicted RBP25.5■■□□□ 1.67
APTR-204ENST00000440088 LRRC59Q96AG4 307 aaKnown RBP25.5■■□□□ 1.67
APTR-204ENST00000440088 IFT57Q9NWB7 429 aa25.5■■□□□ 1.67
APTR-204ENST00000440088 GNAI1P63096 354 aa25.49■■□□□ 1.67
APTR-204ENST00000440088 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.49■■□□□ 1.67
APTR-204ENST00000440088 COL18A1P39060 1754 aa25.49■■□□□ 1.67
APTR-204ENST00000440088 KIAA0232Q92628 1395 aa25.48■■□□□ 1.67
APTR-204ENST00000440088 PLIN1O60240 522 aa25.47■■□□□ 1.67
APTR-204ENST00000440088 NCAPD2Q15021 1401 aa25.47■■□□□ 1.67
APTR-204ENST00000440088 LAS1LQ9Y4W2 734 aaKnown RBP25.47■■□□□ 1.67
APTR-204ENST00000440088 DCTN1Q14203 1278 aa25.47■■□□□ 1.67
APTR-204ENST00000440088 PPP4R2Q9NY27 417 aa25.47■■□□□ 1.67
APTR-204ENST00000440088 CAMTA1Q9Y6Y1 1673 aa25.46■■□□□ 1.67
APTR-204ENST00000440088 HAP1P54257 671 aaPredicted RBP25.46■■□□□ 1.67
APTR-204ENST00000440088 EXOSC9Q06265 439 aaKnown RBP25.46■■□□□ 1.67
APTR-204ENST00000440088 RTF1Q92541 710 aaKnown RBP25.46■■□□□ 1.67
APTR-204ENST00000440088 CFAP44Q96MT7 982 aa25.46■■□□□ 1.67
APTR-204ENST00000440088 ZNF853P0CG23 659 aa25.46■■□□□ 1.67
APTR-204ENST00000440088 BCAR3O75815 825 aa25.45■■□□□ 1.66
APTR-204ENST00000440088 AHDC1Q5TGY3 1603 aaPredicted RBP25.45■■□□□ 1.66
APTR-204ENST00000440088 RARSP54136 660 aaKnown RBP25.44■■□□□ 1.66
APTR-204ENST00000440088 CHRNA2Q15822 529 aa25.44■■□□□ 1.66
APTR-204ENST00000440088 ABCA3Q99758 1704 aa25.44■■□□□ 1.66
APTR-204ENST00000440088 HTATSF1O43719 755 aaKnown RBP25.44■■□□□ 1.66
APTR-204ENST00000440088 MCM10Q7L590 875 aa25.44■■□□□ 1.66
APTR-204ENST00000440088 GNAT3A8MTJ3 354 aa25.42■■□□□ 1.66
APTR-204ENST00000440088 PRDM11Q9NQV5 511 aa25.42■■□□□ 1.66
APTR-204ENST00000440088 MBIPQ9NS73 344 aa25.41■■□□□ 1.66
APTR-204ENST00000440088 LMO7Q8WWI1 1683 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms