RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 ANP32CO43423 234 aa16.07■□□□□ 0.16
AC009404.1-202ENST00000439955 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
AC009404.1-202ENST00000439955 C1QTNF8P60827 252 aa16.06■□□□□ 0.16
AC009404.1-202ENST00000439955 PTF1AQ7RTS3 328 aa16.06■□□□□ 0.16
AC009404.1-202ENST00000439955 PHRF1Q9P1Y6 1649 aaKnown RBP16.05■□□□□ 0.16
AC009404.1-202ENST00000439955 IFFO2Q5TF58 517 aa16.05■□□□□ 0.16
AC009404.1-202ENST00000439955 MIER1Q8N108 512 aa16.05■□□□□ 0.16
AC009404.1-202ENST00000439955 BCL11BQ9C0K0 894 aaPredicted RBP16.05■□□□□ 0.16
AC009404.1-202ENST00000439955 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
AC009404.1-202ENST00000439955 PTGER2P43116 358 aa16.04■□□□□ 0.16
AC009404.1-202ENST00000439955 PER1O15534 1290 aaPredicted RBP16.03■□□□□ 0.16
AC009404.1-202ENST00000439955 SRPK2P78362 688 aaKnown RBP16.03■□□□□ 0.16
AC009404.1-202ENST00000439955 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
AC009404.1-202ENST00000439955 FHDC1Q9C0D6 1143 aaPredicted RBP16.03■□□□□ 0.16
AC009404.1-202ENST00000439955 PANK3Q9H999 370 aa16.03■□□□□ 0.16
AC009404.1-202ENST00000439955 UTRNP46939 3433 aa16.02■□□□□ 0.16
AC009404.1-202ENST00000439955 ZBTB7CA1YPR0 619 aa16.02■□□□□ 0.16
AC009404.1-202ENST00000439955 NUDT16Q96DE0 195 aaKnown RBP16.02■□□□□ 0.16
AC009404.1-202ENST00000439955 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.15
AC009404.1-202ENST00000439955 ANKRD36BQ8N2N9 1353 aa16.01■□□□□ 0.15
AC009404.1-202ENST00000439955 NPC1L1Q9UHC9 1359 aa16.01■□□□□ 0.15
AC009404.1-202ENST00000439955 PLSCR1O15162 318 aa16.01■□□□□ 0.15
AC009404.1-202ENST00000439955 SYT17Q9BSW7 474 aa16.01■□□□□ 0.15
AC009404.1-202ENST00000439955 CABP2Q9NPB3 220 aa16.01■□□□□ 0.15
AC009404.1-202ENST00000439955 ATP7BP35670 1465 aa16.01■□□□□ 0.15
AC009404.1-202ENST00000439955 CASZ1Q86V15 1759 aa16■□□□□ 0.15
AC009404.1-202ENST00000439955 ITSN1Q15811 1721 aa16■□□□□ 0.15
AC009404.1-202ENST00000439955 PROM2Q8N271 834 aa16■□□□□ 0.15
AC009404.1-202ENST00000439955 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
AC009404.1-202ENST00000439955 OVOS2A0A0G2JMS6 1433 aa16■□□□□ 0.15
AC009404.1-202ENST00000439955 OVOS2A0A0J9YW53 1432 aa16■□□□□ 0.15
AC009404.1-202ENST00000439955 OVOS2Q6IE36 1432 aa16■□□□□ 0.15
AC009404.1-202ENST00000439955 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
AC009404.1-202ENST00000439955 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
AC009404.1-202ENST00000439955 PRKRIP1Q9H875 184 aaPredicted RBP15.99■□□□□ 0.15
AC009404.1-202ENST00000439955 ACEP12821 1306 aa15.98■□□□□ 0.15
AC009404.1-202ENST00000439955 DDB1Q16531 1140 aa15.97■□□□□ 0.15
AC009404.1-202ENST00000439955 LMO7Q8WWI1 1683 aa15.97■□□□□ 0.15
AC009404.1-202ENST00000439955 CPDO75976 1380 aa15.97■□□□□ 0.15
AC009404.1-202ENST00000439955 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
AC009404.1-202ENST00000439955 CD163L1Q9NR16 1453 aa15.97■□□□□ 0.15
AC009404.1-202ENST00000439955 TMC1Q8TDI8 760 aa15.96■□□□□ 0.15
AC009404.1-202ENST00000439955 SLC12A5Q9H2X9 1139 aa15.96■□□□□ 0.15
AC009404.1-202ENST00000439955 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
AC009404.1-202ENST00000439955 KNSTRNQ9Y448 316 aa15.96■□□□□ 0.15
AC009404.1-202ENST00000439955 PEAK1Q9H792 1746 aa15.96■□□□□ 0.15
AC009404.1-202ENST00000439955 PARP4Q9UKK3 1724 aaKnown RBP15.96■□□□□ 0.15
AC009404.1-202ENST00000439955 PPIP5K1Q6PFW1 1433 aa15.95■□□□□ 0.14
AC009404.1-202ENST00000439955 GCP02774 474 aa15.95■□□□□ 0.14
AC009404.1-202ENST00000439955 RALBP1Q15311 655 aa15.95■□□□□ 0.14
AC009404.1-202ENST00000439955 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
AC009404.1-202ENST00000439955 CCDC61Q9Y6R9 512 aa15.95■□□□□ 0.14
AC009404.1-202ENST00000439955 AKAP12Q02952 1782 aa15.95■□□□□ 0.14
AC009404.1-202ENST00000439955 CRB1P82279 1406 aa15.94■□□□□ 0.14
AC009404.1-202ENST00000439955 MARCH10Q8NA82 808 aaPredicted RBP15.94■□□□□ 0.14
AC009404.1-202ENST00000439955 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
AC009404.1-202ENST00000439955 CPSF1Q10570 1443 aaKnown RBP15.94■□□□□ 0.14
AC009404.1-202ENST00000439955 NSD3Q9BZ95 1437 aa15.94■□□□□ 0.14
AC009404.1-202ENST00000439955 USP19O94966 1318 aa15.94■□□□□ 0.14
AC009404.1-202ENST00000439955 POLR3AO14802 1390 aaPredicted RBP15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 NSD2O96028 1365 aa15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 SLC15A2Q16348 729 aa15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 TXNRD1Q16881 649 aa15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 MON2Q7Z3U7 1717 aa15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 LRRC37A3O60309 1634 aa15.93■□□□□ 0.14
AC009404.1-202ENST00000439955 GIGYF1O75420 1035 aaPredicted RBP15.92■□□□□ 0.14
AC009404.1-202ENST00000439955 TOM1L2Q6ZVM7 507 aa15.92■□□□□ 0.14
AC009404.1-202ENST00000439955 SGIP1Q9BQI5 828 aa15.92■□□□□ 0.14
AC009404.1-202ENST00000439955 MTFR1LQ9H019 292 aa15.92■□□□□ 0.14
AC009404.1-202ENST00000439955 RGPD3A6NKT7 1758 aaPredicted RBP15.92■□□□□ 0.14
AC009404.1-202ENST00000439955 RGPD4Q7Z3J3 1758 aa15.92■□□□□ 0.14
AC009404.1-202ENST00000439955 NLRP13Q86W25 1043 aa15.91■□□□□ 0.14
AC009404.1-202ENST00000439955 ARXQ96QS3 562 aa15.91■□□□□ 0.14
AC009404.1-202ENST00000439955 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
AC009404.1-202ENST00000439955 CGNL1Q0VF96 1302 aa15.91■□□□□ 0.14
AC009404.1-202ENST00000439955 PLEKHG3A1L390 1219 aa15.9■□□□□ 0.14
AC009404.1-202ENST00000439955 GPR162Q16538 588 aa15.9■□□□□ 0.14
AC009404.1-202ENST00000439955 MYBBP1AQ9BQG0 1328 aaKnown RBP15.9■□□□□ 0.14
AC009404.1-202ENST00000439955 ANKRD26Q9UPS8 1709 aa15.89■□□□□ 0.13
AC009404.1-202ENST00000439955 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
AC009404.1-202ENST00000439955 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
AC009404.1-202ENST00000439955 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
AC009404.1-202ENST00000439955 KIF20BQ96Q89 1820 aa15.89■□□□□ 0.13
AC009404.1-202ENST00000439955 KCNA4P22459 653 aa15.88■□□□□ 0.13
AC009404.1-202ENST00000439955 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
AC009404.1-202ENST00000439955 SBF2Q86WG5 1849 aa15.88■□□□□ 0.13
AC009404.1-202ENST00000439955 AXIN2Q9Y2T1 843 aa15.87■□□□□ 0.13
AC009404.1-202ENST00000439955 BRD4O60885 1362 aaPredicted RBP15.87■□□□□ 0.13
AC009404.1-202ENST00000439955 NLRP6P59044 892 aa15.86■□□□□ 0.13
AC009404.1-202ENST00000439955 CC2D1BQ5T0F9 858 aaKnown RBP15.86■□□□□ 0.13
AC009404.1-202ENST00000439955 AATKQ6ZMQ8 1374 aa15.86■□□□□ 0.13
AC009404.1-202ENST00000439955 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
AC009404.1-202ENST00000439955 WDR17Q8IZU2 1322 aa15.84■□□□□ 0.13
AC009404.1-202ENST00000439955 CEP350Q5VT06 3117 aa15.84■□□□□ 0.13
AC009404.1-202ENST00000439955 USP6P35125 1406 aa15.84■□□□□ 0.13
AC009404.1-202ENST00000439955 SOX12O15370 315 aa15.83■□□□□ 0.12
AC009404.1-202ENST00000439955 CSB-PGBD3P0DP91 1061 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms