RNA–Protein interactions for RNA: ENST00000439214.1

SNAP29-202, Transcript of synaptosome associated protein 29, humanhuman

TSL 3

Gene SNAP29, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-202ENST00000439214 MAFBQ9Y5Q3 323 aaPredicted RBP9.09□□□□□ -0.95
SNAP29-202ENST00000439214 ZBTB24O43167 697 aaPredicted RBP9.08□□□□□ -0.96
SNAP29-202ENST00000439214 UCN2Q96RP3 112 aa9.08□□□□□ -0.96
SNAP29-202ENST00000439214 TJAP1Q5JTD0 557 aa9.07□□□□□ -0.96
SNAP29-202ENST00000439214 ADAM32Q8TC27 787 aa9.07□□□□□ -0.96
SNAP29-202ENST00000439214 CEP126Q9P2H0 1117 aa9.07□□□□□ -0.96
SNAP29-202ENST00000439214 S1PR4O95977 384 aa9.06□□□□□ -0.96
SNAP29-202ENST00000439214 BPHLQ86WA6 291 aaPredicted RBP9.06□□□□□ -0.96
SNAP29-202ENST00000439214 NFATC2IPQ8NCF5 419 aa9.06□□□□□ -0.96
SNAP29-202ENST00000439214 BAP1Q92560 729 aa9.06□□□□□ -0.96
SNAP29-202ENST00000439214 PRDM2Q13029 1718 aa9.05□□□□□ -0.96
SNAP29-202ENST00000439214 MRC2Q9UBG0 1479 aa9.05□□□□□ -0.96
SNAP29-202ENST00000439214 PIK3CDO00329 1044 aa9.05□□□□□ -0.96
SNAP29-202ENST00000439214 GGCXP38435 758 aa9.05□□□□□ -0.96
SNAP29-202ENST00000439214 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
SNAP29-202ENST00000439214 PTCRAQ6ISU1 281 aaPredicted RBP9.05□□□□□ -0.96
SNAP29-202ENST00000439214 LARP1Q6PKG0 1096 aaKnown RBP9.05□□□□□ -0.96
SNAP29-202ENST00000439214 DEPDC4Q8N2C3 294 aa9.05□□□□□ -0.96
SNAP29-202ENST00000439214 USTQ9Y2C2 406 aa9.05□□□□□ -0.96
SNAP29-202ENST00000439214 FCF1Q9Y324 198 aaKnown RBP9.05□□□□□ -0.96
SNAP29-202ENST00000439214 PATL2C9JE40 543 aaKnown RBP9.04□□□□□ -0.96
SNAP29-202ENST00000439214 NKX2-3Q8TAU0 364 aa9.04□□□□□ -0.96
SNAP29-202ENST00000439214 CCDC9Q9Y3X0 531 aaKnown RBP9.04□□□□□ -0.96
SNAP29-202ENST00000439214 USP17L3A6NCW0 530 aa9.03□□□□□ -0.96
SNAP29-202ENST00000439214 USP17L4A6NCW7 530 aa9.03□□□□□ -0.96
SNAP29-202ENST00000439214 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
SNAP29-202ENST00000439214 USP17L2Q6R6M4 530 aa9.03□□□□□ -0.96
SNAP29-202ENST00000439214 USP17L1Q7RTZ2 530 aa9.03□□□□□ -0.96
SNAP29-202ENST00000439214 RBM19Q9Y4C8 960 aaKnown RBP9.03□□□□□ -0.96
SNAP29-202ENST00000439214 ATG7O95352 703 aa9.02□□□□□ -0.97
SNAP29-202ENST00000439214 KCNC4Q03721 635 aa9.02□□□□□ -0.97
SNAP29-202ENST00000439214 EML3Q32P44 896 aa9.02□□□□□ -0.97
SNAP29-202ENST00000439214 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
SNAP29-202ENST00000439214 ESF1Q9H501 851 aaKnown RBP9.02□□□□□ -0.97
SNAP29-202ENST00000439214 MKRN1Q9UHC7 482 aaKnown RBP9.02□□□□□ -0.97
SNAP29-202ENST00000439214 RASA1P20936 1047 aa9.01□□□□□ -0.97
SNAP29-202ENST00000439214 RNF20Q5VTR2 975 aa9.01□□□□□ -0.97
SNAP29-202ENST00000439214 PLPP7Q8NBV4 271 aa9.01□□□□□ -0.97
SNAP29-202ENST00000439214 LZTS3O60299 673 aaPredicted RBP9□□□□□ -0.97
SNAP29-202ENST00000439214 MAP7D1Q3KQU3 841 aa9□□□□□ -0.97
SNAP29-202ENST00000439214 SH3BP5LQ7L8J4 393 aa9□□□□□ -0.97
SNAP29-202ENST00000439214 ZNF511Q8NB15 262 aa9□□□□□ -0.97
SNAP29-202ENST00000439214 ATP5J2-PTCD1G3V325 749 aa8.99□□□□□ -0.97
SNAP29-202ENST00000439214 SRPK2P78362 688 aaKnown RBP8.99□□□□□ -0.97
SNAP29-202ENST00000439214 NCOA4Q13772 614 aa8.99□□□□□ -0.97
SNAP29-202ENST00000439214 OXLD1Q5BKU9 147 aa8.99□□□□□ -0.97
SNAP29-202ENST00000439214 B4GALNT3Q6L9W6 998 aa8.99□□□□□ -0.97
SNAP29-202ENST00000439214 FOXJ1Q92949 421 aa8.99□□□□□ -0.97
SNAP29-202ENST00000439214 DOLKQ9UPQ8 538 aa8.99□□□□□ -0.97
SNAP29-202ENST00000439214 ABCC8Q09428 1581 aa8.99□□□□□ -0.97
SNAP29-202ENST00000439214 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
SNAP29-202ENST00000439214 PPEF1O14829 653 aaPredicted RBP8.98□□□□□ -0.97
SNAP29-202ENST00000439214 BRD1O95696 1058 aa8.98□□□□□ -0.97
SNAP29-202ENST00000439214 TRIM50Q86XT4 487 aa8.98□□□□□ -0.97
SNAP29-202ENST00000439214 PLEKHM2Q8IWE5 1019 aa8.98□□□□□ -0.97
SNAP29-202ENST00000439214 FAM174AQ8TBP5 190 aa8.98□□□□□ -0.97
SNAP29-202ENST00000439214 GZF1Q9H116 711 aaPredicted RBP8.98□□□□□ -0.97
SNAP29-202ENST00000439214 NOVA2Q9UNW9 492 aaKnown RBP8.98□□□□□ -0.97
SNAP29-202ENST00000439214 NOD1Q9Y239 953 aa8.98□□□□□ -0.97
SNAP29-202ENST00000439214 URB2Q14146 1524 aaKnown RBP8.97□□□□□ -0.97
SNAP29-202ENST00000439214 CARNS1A5YM72 827 aa8.97□□□□□ -0.97
SNAP29-202ENST00000439214 RAB15P59190 212 aa8.97□□□□□ -0.97
SNAP29-202ENST00000439214 NBPF20Q3BBV1 942 aa8.97□□□□□ -0.97
SNAP29-202ENST00000439214 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
SNAP29-202ENST00000439214 FAM200AQ8TCP9 573 aa8.97□□□□□ -0.97
SNAP29-202ENST00000439214 OCSTAMPQ9BR26 566 aa8.97□□□□□ -0.97
SNAP29-202ENST00000439214 GIGYF1O75420 1035 aaPredicted RBP8.96□□□□□ -0.98
SNAP29-202ENST00000439214 ATP1A2P50993 1020 aa8.96□□□□□ -0.98
SNAP29-202ENST00000439214 PSME1Q06323 249 aa8.96□□□□□ -0.98
SNAP29-202ENST00000439214 SIRT1Q96EB6 747 aa8.96□□□□□ -0.98
SNAP29-202ENST00000439214 WDR62O43379 1518 aa8.95□□□□□ -0.98
SNAP29-202ENST00000439214 KCNA1Q09470 495 aa8.95□□□□□ -0.98
SNAP29-202ENST00000439214 ERFEQ4G0M1 354 aa8.95□□□□□ -0.98
SNAP29-202ENST00000439214 CDV3Q9UKY7 258 aaKnown RBP8.95□□□□□ -0.98
SNAP29-202ENST00000439214 TOPBP1Q92547 1522 aa8.95□□□□□ -0.98
SNAP29-202ENST00000439214 DNMBPQ6XZF7 1577 aa8.95□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L15C9J2P7 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L10C9JJH3 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L13C9JLJ4 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L12C9JPN9 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L11C9JVI0 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L21D6R901 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L18D6R9N7 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L22D6RA61 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L17D6RBQ6 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L19D6RCP7 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L20D6RJB6 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 USP17L24Q0WX57 530 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 ARID5BQ14865 1188 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 TMCO4Q5TGY1 634 aa8.94□□□□□ -0.98
SNAP29-202ENST00000439214 DNAAF2Q9NVR5 837 aaKnown RBP8.94□□□□□ -0.98
SNAP29-202ENST00000439214 FAM196BA6NMK8 535 aa8.93□□□□□ -0.98
SNAP29-202ENST00000439214 CD2BP2O95400 341 aaKnown RBP8.93□□□□□ -0.98
SNAP29-202ENST00000439214 SH3BP2P78314 561 aa8.93□□□□□ -0.98
SNAP29-202ENST00000439214 USP4Q13107 963 aa8.93□□□□□ -0.98
SNAP29-202ENST00000439214 ELOAQ14241 798 aaKnown RBP8.93□□□□□ -0.98
SNAP29-202ENST00000439214 SH3RF1Q7Z6J0 888 aa8.93□□□□□ -0.98
SNAP29-202ENST00000439214 PHTF2Q8N3S3 785 aa8.93□□□□□ -0.98
SNAP29-202ENST00000439214 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
SNAP29-202ENST00000439214 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms