RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
CSTF3-203ENST00000438862 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
CSTF3-203ENST00000438862 PTGER2P43116 358 aa16.64■□□□□ 0.25
CSTF3-203ENST00000438862 SYT17Q9BSW7 474 aa16.64■□□□□ 0.25
CSTF3-203ENST00000438862 PRR36Q9H6K5 1346 aa16.64■□□□□ 0.25
CSTF3-203ENST00000438862 UTRNP46939 3433 aa16.64■□□□□ 0.25
CSTF3-203ENST00000438862 WASLO00401 505 aaPredicted RBP16.63■□□□□ 0.25
CSTF3-203ENST00000438862 LARP1Q6PKG0 1096 aaKnown RBP16.63■□□□□ 0.25
CSTF3-203ENST00000438862 TULP4Q9NRJ4 1543 aa16.62■□□□□ 0.25
CSTF3-203ENST00000438862 ZBTB7AO95365 584 aa16.62■□□□□ 0.25
CSTF3-203ENST00000438862 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
CSTF3-203ENST00000438862 PHRF1Q9P1Y6 1649 aaKnown RBP16.61■□□□□ 0.25
CSTF3-203ENST00000438862 FHDC1Q9C0D6 1143 aaPredicted RBP16.61■□□□□ 0.25
CSTF3-203ENST00000438862 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
CSTF3-203ENST00000438862 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
CSTF3-203ENST00000438862 OVOS2A0A0G2JMS6 1433 aa16.61■□□□□ 0.25
CSTF3-203ENST00000438862 OVOS2A0A0J9YW53 1432 aa16.61■□□□□ 0.25
CSTF3-203ENST00000438862 OVOS2Q6IE36 1432 aa16.61■□□□□ 0.25
CSTF3-203ENST00000438862 MYOM1P52179 1685 aa16.6■□□□□ 0.25
CSTF3-203ENST00000438862 PARP4Q9UKK3 1724 aaKnown RBP16.6■□□□□ 0.25
CSTF3-203ENST00000438862 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
CSTF3-203ENST00000438862 PDGFDQ9GZP0 370 aaPredicted RBP16.6■□□□□ 0.25
CSTF3-203ENST00000438862 MINK1Q8N4C8 1332 aaPredicted RBP16.59■□□□□ 0.25
CSTF3-203ENST00000438862 ATP7BP35670 1465 aa16.59■□□□□ 0.25
CSTF3-203ENST00000438862 PPARGC1BQ86YN6 1023 aaKnown RBP16.58■□□□□ 0.24
CSTF3-203ENST00000438862 SBF2Q86WG5 1849 aa16.58■□□□□ 0.24
CSTF3-203ENST00000438862 CPDO75976 1380 aa16.57■□□□□ 0.24
CSTF3-203ENST00000438862 GIGYF1O75420 1035 aaPredicted RBP16.57■□□□□ 0.24
CSTF3-203ENST00000438862 PROM2Q8N271 834 aa16.57■□□□□ 0.24
CSTF3-203ENST00000438862 MTFR1LQ9H019 292 aa16.57■□□□□ 0.24
CSTF3-203ENST00000438862 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
CSTF3-203ENST00000438862 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
CSTF3-203ENST00000438862 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
CSTF3-203ENST00000438862 NUTM2GQ5VZR2 741 aa16.56■□□□□ 0.24
CSTF3-203ENST00000438862 MPHOSPH9Q99550 1183 aa16.56■□□□□ 0.24
CSTF3-203ENST00000438862 ITSN1Q15811 1721 aa16.56■□□□□ 0.24
CSTF3-203ENST00000438862 SLC15A2Q16348 729 aa16.55■□□□□ 0.24
CSTF3-203ENST00000438862 NUDT16Q96DE0 195 aaKnown RBP16.55■□□□□ 0.24
CSTF3-203ENST00000438862 LMO7Q8WWI1 1683 aa16.54■□□□□ 0.24
CSTF3-203ENST00000438862 DDB1Q16531 1140 aa16.54■□□□□ 0.24
CSTF3-203ENST00000438862 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
CSTF3-203ENST00000438862 SGIP1Q9BQI5 828 aa16.53■□□□□ 0.24
CSTF3-203ENST00000438862 CRB1P82279 1406 aa16.53■□□□□ 0.24
CSTF3-203ENST00000438862 ARXQ96QS3 562 aa16.52■□□□□ 0.24
CSTF3-203ENST00000438862 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
CSTF3-203ENST00000438862 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
CSTF3-203ENST00000438862 GPR162Q16538 588 aa16.51■□□□□ 0.23
CSTF3-203ENST00000438862 TXNRD1Q16881 649 aa16.51■□□□□ 0.23
CSTF3-203ENST00000438862 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
CSTF3-203ENST00000438862 BCL9O00512 1426 aa16.51■□□□□ 0.23
CSTF3-203ENST00000438862 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
CSTF3-203ENST00000438862 GCP02774 474 aa16.5■□□□□ 0.23
CSTF3-203ENST00000438862 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
CSTF3-203ENST00000438862 PTF1AQ7RTS3 328 aa16.5■□□□□ 0.23
CSTF3-203ENST00000438862 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
CSTF3-203ENST00000438862 POLR3AO14802 1390 aaPredicted RBP16.5■□□□□ 0.23
CSTF3-203ENST00000438862 USP19O94966 1318 aa16.49■□□□□ 0.23
CSTF3-203ENST00000438862 ACEP12821 1306 aa16.49■□□□□ 0.23
CSTF3-203ENST00000438862 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
CSTF3-203ENST00000438862 CCDC61Q9Y6R9 512 aa16.48■□□□□ 0.23
CSTF3-203ENST00000438862 CEP350Q5VT06 3117 aa16.48■□□□□ 0.23
CSTF3-203ENST00000438862 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
CSTF3-203ENST00000438862 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
CSTF3-203ENST00000438862 MARCH10Q8NA82 808 aaPredicted RBP16.47■□□□□ 0.23
CSTF3-203ENST00000438862 LRRC37A3O60309 1634 aa16.47■□□□□ 0.23
CSTF3-203ENST00000438862 AATKQ6ZMQ8 1374 aa16.47■□□□□ 0.23
CSTF3-203ENST00000438862 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
CSTF3-203ENST00000438862 CDK19Q9BWU1 502 aa16.46■□□□□ 0.23
CSTF3-203ENST00000438862 LHX8Q68G74 356 aa16.43■□□□□ 0.22
CSTF3-203ENST00000438862 STAC3Q96MF2 364 aa16.43■□□□□ 0.22
CSTF3-203ENST00000438862 AKAP12Q02952 1782 aa16.43■□□□□ 0.22
CSTF3-203ENST00000438862 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
CSTF3-203ENST00000438862 EXOC5O00471 708 aa16.41■□□□□ 0.22
CSTF3-203ENST00000438862 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
CSTF3-203ENST00000438862 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
CSTF3-203ENST00000438862 SLC16A10Q8TF71 515 aa16.4■□□□□ 0.22
CSTF3-203ENST00000438862 WDR17Q8IZU2 1322 aa16.4■□□□□ 0.22
CSTF3-203ENST00000438862 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
CSTF3-203ENST00000438862 WNK3Q9BYP7 1800 aa16.38■□□□□ 0.21
CSTF3-203ENST00000438862 GRIN3BO60391 1043 aa16.38■□□□□ 0.21
CSTF3-203ENST00000438862 POLD1P28340 1107 aa16.38■□□□□ 0.21
CSTF3-203ENST00000438862 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
CSTF3-203ENST00000438862 KDM2AQ9Y2K7 1162 aa16.38■□□□□ 0.21
CSTF3-203ENST00000438862 ARHGEF28Q8N1W1 1705 aaKnown RBP16.38■□□□□ 0.21
CSTF3-203ENST00000438862 NLRP6P59044 892 aa16.37■□□□□ 0.21
CSTF3-203ENST00000438862 DCAF11Q8TEB1 546 aa16.37■□□□□ 0.21
CSTF3-203ENST00000438862 CARD10Q9BWT7 1032 aa16.37■□□□□ 0.21
CSTF3-203ENST00000438862 ZNF579Q8NAF0 562 aaKnown RBP16.36■□□□□ 0.21
CSTF3-203ENST00000438862 HSPA6P17066 643 aa16.35■□□□□ 0.21
CSTF3-203ENST00000438862 KLHL34Q8N239 644 aa16.35■□□□□ 0.21
CSTF3-203ENST00000438862 AXIN2Q9Y2T1 843 aa16.35■□□□□ 0.21
CSTF3-203ENST00000438862 COL18A1P39060 1754 aa16.35■□□□□ 0.21
CSTF3-203ENST00000438862 PAPPAQ13219 1627 aa16.34■□□□□ 0.21
CSTF3-203ENST00000438862 SLIT3O75094 1523 aa16.33■□□□□ 0.2
CSTF3-203ENST00000438862 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
CSTF3-203ENST00000438862 CLCN6P51797 869 aa16.32■□□□□ 0.2
CSTF3-203ENST00000438862 GOLGB1Q14789 3259 aaKnown RBP16.32■□□□□ 0.2
CSTF3-203ENST00000438862 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
CSTF3-203ENST00000438862 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
CSTF3-203ENST00000438862 PPIP5K1Q6PFW1 1433 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms