RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
SPEN-202ENST00000438066 KIAA1522Q9P206 1035 aaPredicted RBP9.56□□□□□ -0.88
SPEN-202ENST00000438066 ERCC3P19447 782 aa9.56□□□□□ -0.88
SPEN-202ENST00000438066 LAPTM4BQ86VI4 370 aa9.56□□□□□ -0.88
SPEN-202ENST00000438066 ZNF594Q96JF6 807 aaPredicted RBP9.56□□□□□ -0.88
SPEN-202ENST00000438066 BIN2Q9UBW5 565 aaPredicted RBP9.56□□□□□ -0.88
SPEN-202ENST00000438066 DNMBPQ6XZF7 1577 aa9.56□□□□□ -0.88
SPEN-202ENST00000438066 DPYDQ12882 1025 aa9.55□□□□□ -0.88
SPEN-202ENST00000438066 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
SPEN-202ENST00000438066 PCDHB9Q9Y5E1 797 aa9.55□□□□□ -0.88
SPEN-202ENST00000438066 TNIKQ9UKE5 1360 aa9.55□□□□□ -0.88
SPEN-202ENST00000438066 MARSP56192 900 aaKnown RBP9.54□□□□□ -0.88
SPEN-202ENST00000438066 BRICD5Q6PL45 260 aa9.54□□□□□ -0.88
SPEN-202ENST00000438066 OGFOD1Q8N543 542 aa9.54□□□□□ -0.88
SPEN-202ENST00000438066 BCL2L13Q9BXK5 485 aa9.54□□□□□ -0.88
SPEN-202ENST00000438066 IGSF5Q9NSI5 407 aa9.54□□□□□ -0.88
SPEN-202ENST00000438066 ZNF16P17020 682 aaPredicted RBP9.53□□□□□ -0.88
SPEN-202ENST00000438066 PTPRNQ16849 979 aa9.53□□□□□ -0.88
SPEN-202ENST00000438066 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
SPEN-202ENST00000438066 CEP162Q5TB80 1403 aa9.53□□□□□ -0.88
SPEN-202ENST00000438066 ERICH3Q5RHP9 1530 aa9.53□□□□□ -0.88
SPEN-202ENST00000438066 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
SPEN-202ENST00000438066 MAMSTRQ6ZN01 415 aa9.53□□□□□ -0.88
SPEN-202ENST00000438066 PHTF2Q8N3S3 785 aa9.53□□□□□ -0.88
SPEN-202ENST00000438066 JUNDP17535 347 aa9.52□□□□□ -0.89
SPEN-202ENST00000438066 CLDN10P78369 228 aa9.52□□□□□ -0.89
SPEN-202ENST00000438066 PTK2Q05397 1052 aa9.52□□□□□ -0.89
SPEN-202ENST00000438066 EML3Q32P44 896 aa9.52□□□□□ -0.89
SPEN-202ENST00000438066 LRCH3Q96II8 777 aa9.52□□□□□ -0.89
SPEN-202ENST00000438066 OCSTAMPQ9BR26 566 aa9.52□□□□□ -0.89
SPEN-202ENST00000438066 KIF21AQ7Z4S6 1674 aa9.52□□□□□ -0.89
SPEN-202ENST00000438066 PRXQ9BXM0 1461 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 SIRT1Q96EB6 747 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 TOPBP1Q92547 1522 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 KIF27Q86VH2 1401 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 RAPGEF2Q9Y4G8 1499 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 FMNL1O95466 1100 aaPredicted RBP9.51□□□□□ -0.89
SPEN-202ENST00000438066 SWI5Q1ZZU3 235 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 TSGA10IPQ3SY00 556 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 GIPC2Q8TF65 315 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 ZNF592Q92610 1267 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 SALL2Q9Y467 1007 aaPredicted RBP9.51□□□□□ -0.89
SPEN-202ENST00000438066 GPSM3Q9Y4H4 160 aa9.51□□□□□ -0.89
SPEN-202ENST00000438066 ERBB3P21860 1342 aa9.5□□□□□ -0.89
SPEN-202ENST00000438066 LZTS3O60299 673 aaPredicted RBP9.5□□□□□ -0.89
SPEN-202ENST00000438066 PDXDC2PQ6P474 469 aa9.5□□□□□ -0.89
SPEN-202ENST00000438066 PRR14Q9BWN1 585 aa9.5□□□□□ -0.89
SPEN-202ENST00000438066 DNAAF2Q9NVR5 837 aaKnown RBP9.5□□□□□ -0.89
SPEN-202ENST00000438066 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.5□□□□□ -0.89
SPEN-202ENST00000438066 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
SPEN-202ENST00000438066 BHMG1C9JSJ3 638 aaPredicted RBP9.49□□□□□ -0.89
SPEN-202ENST00000438066 PRMT3O60678 531 aa9.49□□□□□ -0.89
SPEN-202ENST00000438066 SP7Q8TDD2 431 aaPredicted RBP9.49□□□□□ -0.89
SPEN-202ENST00000438066 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
SPEN-202ENST00000438066 URB2Q14146 1524 aaKnown RBP9.49□□□□□ -0.89
SPEN-202ENST00000438066 PDS5BQ9NTI5 1447 aa9.48□□□□□ -0.89
SPEN-202ENST00000438066 ANKRD33BA6NCL7 494 aa9.48□□□□□ -0.89
SPEN-202ENST00000438066 ABL1P00519 1130 aa9.48□□□□□ -0.89
SPEN-202ENST00000438066 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
SPEN-202ENST00000438066 TRAF7Q6Q0C0 670 aa9.48□□□□□ -0.89
SPEN-202ENST00000438066 MRPL50Q8N5N7 158 aaKnown RBP9.48□□□□□ -0.89
SPEN-202ENST00000438066 CCNYL3P0C7X3 344 aa9.48□□□□□ -0.89
SPEN-202ENST00000438066 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
SPEN-202ENST00000438066 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
SPEN-202ENST00000438066 POLA1P09884 1462 aaPredicted RBP9.48□□□□□ -0.89
SPEN-202ENST00000438066 CUX2O14529 1486 aa9.47□□□□□ -0.89
SPEN-202ENST00000438066 ATP1A2P50993 1020 aa9.47□□□□□ -0.89
SPEN-202ENST00000438066 MCCD1P59942 119 aaPredicted RBP9.47□□□□□ -0.89
SPEN-202ENST00000438066 ARMC2Q8NEN0 867 aa9.47□□□□□ -0.89
SPEN-202ENST00000438066 EVA1BQ9NVM1 165 aa9.47□□□□□ -0.89
SPEN-202ENST00000438066 CHIC2Q9UKJ5 165 aa9.47□□□□□ -0.89
SPEN-202ENST00000438066 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
SPEN-202ENST00000438066 NOD1Q9Y239 953 aa9.47□□□□□ -0.89
SPEN-202ENST00000438066 ABCA10Q8WWZ4 1543 aa9.46□□□□□ -0.89
SPEN-202ENST00000438066 NBPF14Q5TI25 921 aa9.46□□□□□ -0.89
SPEN-202ENST00000438066 GPKOWQ92917 476 aaPredicted RBP eCLIP9.46□□□□□ -0.89
SPEN-202ENST00000438066 NUDT12Q9BQG2 462 aa9.46□□□□□ -0.89
SPEN-202ENST00000438066 ANO2Q9NQ90 1003 aa9.46□□□□□ -0.89
SPEN-202ENST00000438066 APLP1P51693 650 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
SPEN-202ENST00000438066 NPAS4Q8IUM7 802 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 PRIMPOLQ96LW4 560 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 ARHGAP9Q9BRR9 750 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 PCDHB3Q9Y5E6 796 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 NR1I2O75469 434 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 PBX2P40425 430 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 LARGE2Q8N3Y3 721 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 C1orf216Q8TAB5 229 aa9.45□□□□□ -0.9
SPEN-202ENST00000438066 H3BRB1 525 aa9.44□□□□□ -0.9
SPEN-202ENST00000438066 PPP4CP60510 307 aa9.44□□□□□ -0.9
SPEN-202ENST00000438066 OXLD1Q5BKU9 147 aa9.44□□□□□ -0.9
SPEN-202ENST00000438066 ZBTB33Q86T24 672 aa9.44□□□□□ -0.9
SPEN-202ENST00000438066 TUT1Q9H6E5 874 aaKnown RBP9.44□□□□□ -0.9
SPEN-202ENST00000438066 DOLKQ9UPQ8 538 aa9.44□□□□□ -0.9
SPEN-202ENST00000438066 LGR5O75473 907 aa9.43□□□□□ -0.9
SPEN-202ENST00000438066 DKK1O94907 266 aa9.43□□□□□ -0.9
SPEN-202ENST00000438066 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
SPEN-202ENST00000438066 SEC13P55735 322 aa9.42□□□□□ -0.9
SPEN-202ENST00000438066 GTF2IP78347 998 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms