RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 HSCBQ8IWL3 235 aa13.2□□□□□ -0.3
NOD1-206ENST00000434755 KDM5AP29375 1690 aaKnown RBP13.2□□□□□ -0.3
NOD1-206ENST00000434755 E9PCH4 1651 aa13.19□□□□□ -0.3
NOD1-206ENST00000434755 FYB1O15117 783 aa13.19□□□□□ -0.3
NOD1-206ENST00000434755 NEURL4Q96JN8 1562 aa13.19□□□□□ -0.3
NOD1-206ENST00000434755 CEP152O94986 1710 aa13.19□□□□□ -0.3
NOD1-206ENST00000434755 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
NOD1-206ENST00000434755 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
NOD1-206ENST00000434755 ZNF530Q6P9A1 599 aaPredicted RBP13.18□□□□□ -0.3
NOD1-206ENST00000434755 RRS1Q15050 365 aaKnown RBP13.17□□□□□ -0.3
NOD1-206ENST00000434755 CCDC30Q5VVM6 783 aa13.17□□□□□ -0.3
NOD1-206ENST00000434755 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
NOD1-206ENST00000434755 NOL8Q76FK4 1167 aaKnown RBP13.17□□□□□ -0.3
NOD1-206ENST00000434755 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
NOD1-206ENST00000434755 MSH5O43196 834 aa13.17□□□□□ -0.3
NOD1-206ENST00000434755 HSPA2P54652 639 aa13.17□□□□□ -0.3
NOD1-206ENST00000434755 PPRC1Q5VV67 1664 aaKnown RBP13.17□□□□□ -0.3
NOD1-206ENST00000434755 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
NOD1-206ENST00000434755 STRN4Q9NRL3 753 aa13.16□□□□□ -0.3
NOD1-206ENST00000434755 SETBP1Q9Y6X0 1596 aa13.16□□□□□ -0.3
NOD1-206ENST00000434755 HSP90B1P14625 803 aaKnown RBP13.16□□□□□ -0.3
NOD1-206ENST00000434755 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
NOD1-206ENST00000434755 FLT4P35916 1363 aa13.16□□□□□ -0.3
NOD1-206ENST00000434755 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
NOD1-206ENST00000434755 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
NOD1-206ENST00000434755 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
NOD1-206ENST00000434755 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
NOD1-206ENST00000434755 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
NOD1-206ENST00000434755 ARHGEF10O15013 1369 aa13.15□□□□□ -0.3
NOD1-206ENST00000434755 BLMP54132 1417 aaPredicted RBP13.15□□□□□ -0.3
NOD1-206ENST00000434755 ATP7BP35670 1465 aa13.15□□□□□ -0.3
NOD1-206ENST00000434755 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
NOD1-206ENST00000434755 DEPDC5O75140 1603 aa13.15□□□□□ -0.3
NOD1-206ENST00000434755 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
NOD1-206ENST00000434755 DUSP27Q5VZP5 1158 aa13.14□□□□□ -0.31
NOD1-206ENST00000434755 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
NOD1-206ENST00000434755 GNAT3A8MTJ3 354 aa13.14□□□□□ -0.31
NOD1-206ENST00000434755 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
NOD1-206ENST00000434755 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
NOD1-206ENST00000434755 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
NOD1-206ENST00000434755 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
NOD1-206ENST00000434755 RILPL2Q969X0 211 aa13.13□□□□□ -0.31
NOD1-206ENST00000434755 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
NOD1-206ENST00000434755 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
NOD1-206ENST00000434755 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
NOD1-206ENST00000434755 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
NOD1-206ENST00000434755 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
NOD1-206ENST00000434755 TRIM44Q96DX7 344 aaPredicted RBP13.12□□□□□ -0.31
NOD1-206ENST00000434755 EMILIN1Q9Y6C2 1016 aa13.12□□□□□ -0.31
NOD1-206ENST00000434755 GOLGA6L4A6NEF3 574 aa13.12□□□□□ -0.31
NOD1-206ENST00000434755 NUTM2BA6NNL0 878 aaPredicted RBP13.12□□□□□ -0.31
NOD1-206ENST00000434755 NUTM2EB1AL46 878 aaPredicted RBP13.12□□□□□ -0.31
NOD1-206ENST00000434755 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
NOD1-206ENST00000434755 NUTM2AQ8IVF1 878 aaPredicted RBP13.12□□□□□ -0.31
NOD1-206ENST00000434755 METP08581 1390 aa13.12□□□□□ -0.31
NOD1-206ENST00000434755 LMTK3Q96Q04 1460 aa13.11□□□□□ -0.31
NOD1-206ENST00000434755 CABP4P57796 275 aa13.11□□□□□ -0.31
NOD1-206ENST00000434755 TWISTNBQ3B726 338 aaPredicted RBP13.11□□□□□ -0.31
NOD1-206ENST00000434755 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
NOD1-206ENST00000434755 RICTORQ6R327 1708 aa13.11□□□□□ -0.31
NOD1-206ENST00000434755 ATF7IPQ6VMQ6 1270 aa13.11□□□□□ -0.31
NOD1-206ENST00000434755 GCC1Q96CN9 775 aa13.11□□□□□ -0.31
NOD1-206ENST00000434755 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
NOD1-206ENST00000434755 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
NOD1-206ENST00000434755 SLC4A3P48751 1232 aa13.1□□□□□ -0.31
NOD1-206ENST00000434755 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
NOD1-206ENST00000434755 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
NOD1-206ENST00000434755 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
NOD1-206ENST00000434755 UBAP1LF5GYI3 381 aa13.09□□□□□ -0.31
NOD1-206ENST00000434755 GNAI3P08754 354 aa13.09□□□□□ -0.31
NOD1-206ENST00000434755 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
NOD1-206ENST00000434755 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
NOD1-206ENST00000434755 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
NOD1-206ENST00000434755 ALKQ9UM73 1620 aa13.08□□□□□ -0.32
NOD1-206ENST00000434755 RARSP54136 660 aaKnown RBP13.08□□□□□ -0.32
NOD1-206ENST00000434755 DDX54Q8TDD1 881 aaKnown RBP13.08□□□□□ -0.32
NOD1-206ENST00000434755 SBNO1A3KN83 1393 aa13.08□□□□□ -0.32
NOD1-206ENST00000434755 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
NOD1-206ENST00000434755 LNPKQ9C0E8 428 aa13.08□□□□□ -0.32
NOD1-206ENST00000434755 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
NOD1-206ENST00000434755 DLC1Q96QB1 1528 aa13.08□□□□□ -0.32
NOD1-206ENST00000434755 G3V3G9 751 aa13.08□□□□□ -0.32
NOD1-206ENST00000434755 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
NOD1-206ENST00000434755 POLKQ9UBT6 870 aa13.08□□□□□ -0.32
NOD1-206ENST00000434755 FAM177BA6PVY3 158 aa13.07□□□□□ -0.32
NOD1-206ENST00000434755 ANKRD24Q8TF21 1146 aa13.07□□□□□ -0.32
NOD1-206ENST00000434755 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
NOD1-206ENST00000434755 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
NOD1-206ENST00000434755 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
NOD1-206ENST00000434755 IP6K1Q92551 441 aa13.07□□□□□ -0.32
NOD1-206ENST00000434755 PREX1Q8TCU6 1659 aa13.06□□□□□ -0.32
NOD1-206ENST00000434755 FRMPD1Q5SYB0 1578 aa13.06□□□□□ -0.32
NOD1-206ENST00000434755 IFNL2Q8IZJ0 200 aa13.06□□□□□ -0.32
NOD1-206ENST00000434755 SOS1Q07889 1333 aaPredicted RBP13.06□□□□□ -0.32
NOD1-206ENST00000434755 BCAR3O75815 825 aa13.06□□□□□ -0.32
NOD1-206ENST00000434755 GCP02774 474 aa13.06□□□□□ -0.32
NOD1-206ENST00000434755 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
NOD1-206ENST00000434755 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
NOD1-206ENST00000434755 HDGFL1Q5TGJ6 251 aa13.06□□□□□ -0.32
NOD1-206ENST00000434755 SLAIN2Q9P270 581 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms