RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
DDX56-205ENST00000433257 XRN1Q8IZH2 1706 aaKnown RBP18.56■□□□□ 0.56
DDX56-205ENST00000433257 PTCH1Q13635 1447 aa18.55■□□□□ 0.56
DDX56-205ENST00000433257 TOM1O60784 492 aa18.55■□□□□ 0.56
DDX56-205ENST00000433257 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
DDX56-205ENST00000433257 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.56
DDX56-205ENST00000433257 ALDH1L2Q3SY69 923 aa18.55■□□□□ 0.56
DDX56-205ENST00000433257 MSH6P52701 1360 aa18.55■□□□□ 0.56
DDX56-205ENST00000433257 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
DDX56-205ENST00000433257 MRE11P49959 708 aa18.54■□□□□ 0.56
DDX56-205ENST00000433257 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
DDX56-205ENST00000433257 SMC4Q9NTJ3 1288 aa18.54■□□□□ 0.56
DDX56-205ENST00000433257 TECPR2O15040 1411 aa18.54■□□□□ 0.56
DDX56-205ENST00000433257 ATAD2Q6PL18 1390 aa18.54■□□□□ 0.56
DDX56-205ENST00000433257 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
DDX56-205ENST00000433257 PRAM1Q96QH2 718 aa18.54■□□□□ 0.56
DDX56-205ENST00000433257 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
DDX56-205ENST00000433257 ATF3P18847 181 aa18.53■□□□□ 0.56
DDX56-205ENST00000433257 SKOR2Q2VWA4 1001 aaPredicted RBP18.53■□□□□ 0.56
DDX56-205ENST00000433257 RBM25P49756 843 aaKnown RBP18.52■□□□□ 0.56
DDX56-205ENST00000433257 BRPF1P55201 1214 aaPredicted RBP18.52■□□□□ 0.56
DDX56-205ENST00000433257 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.56
DDX56-205ENST00000433257 CDC42BPGQ6DT37 1551 aa18.52■□□□□ 0.55
DDX56-205ENST00000433257 SAFB2Q14151 953 aaKnown RBP eCLIP18.51■□□□□ 0.55
DDX56-205ENST00000433257 COL3A1P02461 1466 aaPredicted RBP18.51■□□□□ 0.55
DDX56-205ENST00000433257 CADPS2Q86UW7 1296 aa18.5■□□□□ 0.55
DDX56-205ENST00000433257 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
DDX56-205ENST00000433257 CALD1Q05682 793 aaKnown RBP18.5■□□□□ 0.55
DDX56-205ENST00000433257 GBP4Q96PP9 640 aa18.5■□□□□ 0.55
DDX56-205ENST00000433257 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
DDX56-205ENST00000433257 TERF2IPQ9NYB0 399 aa18.49■□□□□ 0.55
DDX56-205ENST00000433257 TRAK2O60296 914 aa18.48■□□□□ 0.55
DDX56-205ENST00000433257 PLEKHF1Q96S99 279 aa18.48■□□□□ 0.55
DDX56-205ENST00000433257 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
DDX56-205ENST00000433257 KNDC1Q76NI1 1749 aa18.48■□□□□ 0.55
DDX56-205ENST00000433257 TRIM27P14373 513 aa18.47■□□□□ 0.55
DDX56-205ENST00000433257 TNNT2P45379 298 aaPredicted RBP18.47■□□□□ 0.55
DDX56-205ENST00000433257 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
DDX56-205ENST00000433257 UBE2Q2Q8WVN8 375 aa18.47■□□□□ 0.55
DDX56-205ENST00000433257 GCC1Q96CN9 775 aa18.47■□□□□ 0.55
DDX56-205ENST00000433257 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
DDX56-205ENST00000433257 CLCN1P35523 988 aa18.47■□□□□ 0.55
DDX56-205ENST00000433257 MFAP1P55081 439 aaKnown RBP18.47■□□□□ 0.55
DDX56-205ENST00000433257 FBXO41Q8TF61 875 aa18.47■□□□□ 0.55
DDX56-205ENST00000433257 BCL2L13Q9BXK5 485 aa18.47■□□□□ 0.55
DDX56-205ENST00000433257 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.47■□□□□ 0.55
DDX56-205ENST00000433257 ADGRL3Q9HAR2 1447 aa18.46■□□□□ 0.55
DDX56-205ENST00000433257 PIP4K2BP78356 416 aa18.46■□□□□ 0.55
DDX56-205ENST00000433257 NUCB1Q02818 461 aa18.46■□□□□ 0.55
DDX56-205ENST00000433257 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
DDX56-205ENST00000433257 BMP2KLQ5H9B9 411 aa18.46■□□□□ 0.55
DDX56-205ENST00000433257 ARHGAP45Q92619 1136 aa18.46■□□□□ 0.55
DDX56-205ENST00000433257 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
DDX56-205ENST00000433257 ZBTB40Q9NUA8 1239 aa18.45■□□□□ 0.54
DDX56-205ENST00000433257 SSH1Q8WYL5 1049 aa18.44■□□□□ 0.54
DDX56-205ENST00000433257 KIF20BQ96Q89 1820 aa18.44■□□□□ 0.54
DDX56-205ENST00000433257 PNPLA6Q8IY17 1366 aa18.44■□□□□ 0.54
DDX56-205ENST00000433257 MINK1Q8N4C8 1332 aaPredicted RBP18.44■□□□□ 0.54
DDX56-205ENST00000433257 XRCC6P12956 609 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX56-205ENST00000433257 DCCP43146 1447 aa18.43■□□□□ 0.54
DDX56-205ENST00000433257 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
DDX56-205ENST00000433257 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
DDX56-205ENST00000433257 FCHSD2O94868 740 aa18.42■□□□□ 0.54
DDX56-205ENST00000433257 DDIT3P35638 169 aa18.42■□□□□ 0.54
DDX56-205ENST00000433257 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
DDX56-205ENST00000433257 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.42■□□□□ 0.54
DDX56-205ENST00000433257 NOB1Q9ULX3 412 aaKnown RBP18.41■□□□□ 0.54
DDX56-205ENST00000433257 KIF24Q5T7B8 1368 aa18.41■□□□□ 0.54
DDX56-205ENST00000433257 GOLGA6L22H0YM25 854 aa18.41■□□□□ 0.54
DDX56-205ENST00000433257 DIAPH1O60610 1272 aaKnown RBP18.41■□□□□ 0.54
DDX56-205ENST00000433257 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
DDX56-205ENST00000433257 CHD1LQ86WJ1 897 aa18.41■□□□□ 0.54
DDX56-205ENST00000433257 U2SURPO15042 1029 aaKnown RBP18.4■□□□□ 0.54
DDX56-205ENST00000433257 GLIPR1L2Q4G1C9 344 aa18.4■□□□□ 0.54
DDX56-205ENST00000433257 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
DDX56-205ENST00000433257 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
DDX56-205ENST00000433257 RIPK4P57078 832 aa18.39■□□□□ 0.53
DDX56-205ENST00000433257 TMEM57Q8N5G2 664 aa18.39■□□□□ 0.53
DDX56-205ENST00000433257 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
DDX56-205ENST00000433257 NALCNQ8IZF0 1738 aa18.39■□□□□ 0.53
DDX56-205ENST00000433257 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
DDX56-205ENST00000433257 WASLO00401 505 aaPredicted RBP18.38■□□□□ 0.53
DDX56-205ENST00000433257 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
DDX56-205ENST00000433257 RRAGDQ9NQL2 400 aaPredicted RBP18.38■□□□□ 0.53
DDX56-205ENST00000433257 RAB3GAP1Q15042 981 aa18.38■□□□□ 0.53
DDX56-205ENST00000433257 IBTKQ9P2D0 1353 aaPredicted RBP18.37■□□□□ 0.53
DDX56-205ENST00000433257 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
DDX56-205ENST00000433257 LMOD3Q0VAK6 560 aa18.36■□□□□ 0.53
DDX56-205ENST00000433257 CLEC17AQ6ZS10 378 aa18.36■□□□□ 0.53
DDX56-205ENST00000433257 SRPK2P78362 688 aaKnown RBP18.35■□□□□ 0.53
DDX56-205ENST00000433257 CDK19Q9BWU1 502 aa18.35■□□□□ 0.53
DDX56-205ENST00000433257 ESCO1Q5FWF5 840 aa18.34■□□□□ 0.53
DDX56-205ENST00000433257 TRIM44Q96DX7 344 aaPredicted RBP18.34■□□□□ 0.53
DDX56-205ENST00000433257 ATP7BP35670 1465 aa18.34■□□□□ 0.53
DDX56-205ENST00000433257 MST1RQ04912 1400 aa18.34■□□□□ 0.53
DDX56-205ENST00000433257 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
DDX56-205ENST00000433257 K7ELQ4 463 aaPredicted RBP18.33■□□□□ 0.52
DDX56-205ENST00000433257 HSP90AA1P07900 732 aaKnown RBP18.33■□□□□ 0.52
DDX56-205ENST00000433257 GNAI1P63096 354 aa18.33■□□□□ 0.52
DDX56-205ENST00000433257 ANP32BQ92688 251 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms