RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
DDX56-204ENST00000431640 MYH16Q9H6N6 1097 aa16.65■□□□□ 0.26
DDX56-204ENST00000431640 USP31Q70CQ4 1352 aa16.65■□□□□ 0.26
DDX56-204ENST00000431640 PEAK1Q9H792 1746 aa16.65■□□□□ 0.26
DDX56-204ENST00000431640 FBLN1P23142 703 aa16.64■□□□□ 0.25
DDX56-204ENST00000431640 PSME1Q06323 249 aa16.64■□□□□ 0.25
DDX56-204ENST00000431640 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
DDX56-204ENST00000431640 SLIT3O75094 1523 aa16.64■□□□□ 0.25
DDX56-204ENST00000431640 NFAT5O94916 1531 aa16.64■□□□□ 0.25
DDX56-204ENST00000431640 PHLPP1O60346 1717 aa16.64■□□□□ 0.25
DDX56-204ENST00000431640 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
DDX56-204ENST00000431640 NUTM2GQ5VZR2 741 aa16.64■□□□□ 0.25
DDX56-204ENST00000431640 SBNO1A3KN83 1393 aa16.63■□□□□ 0.25
DDX56-204ENST00000431640 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
DDX56-204ENST00000431640 U2SURPO15042 1029 aaKnown RBP16.63■□□□□ 0.25
DDX56-204ENST00000431640 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
DDX56-204ENST00000431640 PAK3O75914 559 aaPredicted RBP16.62■□□□□ 0.25
DDX56-204ENST00000431640 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
DDX56-204ENST00000431640 RRP7AQ9Y3A4 280 aaKnown RBP16.62■□□□□ 0.25
DDX56-204ENST00000431640 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
DDX56-204ENST00000431640 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
DDX56-204ENST00000431640 CT47B1P0C2W7 299 aaPredicted RBP16.61■□□□□ 0.25
DDX56-204ENST00000431640 MS4A1P11836 297 aa16.61■□□□□ 0.25
DDX56-204ENST00000431640 C20orf194Q5TEA3 1177 aa16.61■□□□□ 0.25
DDX56-204ENST00000431640 MAP2P11137 1827 aaKnown RBP16.6■□□□□ 0.25
DDX56-204ENST00000431640 FCHSD2O94868 740 aa16.6■□□□□ 0.25
DDX56-204ENST00000431640 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
DDX56-204ENST00000431640 USP19O94966 1318 aa16.6■□□□□ 0.25
DDX56-204ENST00000431640 SPATA31A3Q5VYP0 1347 aa16.6■□□□□ 0.25
DDX56-204ENST00000431640 NEFMP07197 916 aa16.6■□□□□ 0.25
DDX56-204ENST00000431640 AAMPQ13685 434 aa16.6■□□□□ 0.25
DDX56-204ENST00000431640 LTN1O94822 1766 aa16.59■□□□□ 0.25
DDX56-204ENST00000431640 TOM1O60784 492 aa16.59■□□□□ 0.25
DDX56-204ENST00000431640 BCAR3O75815 825 aa16.59■□□□□ 0.25
DDX56-204ENST00000431640 TMPOP42166 694 aaKnown RBP16.59■□□□□ 0.25
DDX56-204ENST00000431640 CENPQQ7L2Z9 268 aaPredicted RBP16.59■□□□□ 0.25
DDX56-204ENST00000431640 ABTB2Q8N961 1025 aa16.59■□□□□ 0.25
DDX56-204ENST00000431640 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
DDX56-204ENST00000431640 IL16Q14005 1332 aa16.58■□□□□ 0.25
DDX56-204ENST00000431640 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.25
DDX56-204ENST00000431640 MYT1Q01538 1121 aa16.58■□□□□ 0.24
DDX56-204ENST00000431640 COG3Q96JB2 828 aa16.58■□□□□ 0.24
DDX56-204ENST00000431640 COL22A1Q8NFW1 1626 aaPredicted RBP16.58■□□□□ 0.24
DDX56-204ENST00000431640 NLRP6P59044 892 aa16.57■□□□□ 0.24
DDX56-204ENST00000431640 CANXP27824 592 aaKnown RBP16.55■□□□□ 0.24
DDX56-204ENST00000431640 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
DDX56-204ENST00000431640 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
DDX56-204ENST00000431640 EMILIN1Q9Y6C2 1016 aa16.55■□□□□ 0.24
DDX56-204ENST00000431640 SOX12O15370 315 aa16.55■□□□□ 0.24
DDX56-204ENST00000431640 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
DDX56-204ENST00000431640 LMOD2Q6P5Q4 547 aa16.54■□□□□ 0.24
DDX56-204ENST00000431640 KDM2BQ8NHM5 1336 aa16.54■□□□□ 0.24
DDX56-204ENST00000431640 ARHGEF10O15013 1369 aa16.54■□□□□ 0.24
DDX56-204ENST00000431640 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
DDX56-204ENST00000431640 RIPK4P57078 832 aa16.53■□□□□ 0.24
DDX56-204ENST00000431640 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
DDX56-204ENST00000431640 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
DDX56-204ENST00000431640 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.24
DDX56-204ENST00000431640 MAP3K19Q56UN5 1328 aa16.52■□□□□ 0.24
DDX56-204ENST00000431640 COL18A1P39060 1754 aa16.52■□□□□ 0.24
DDX56-204ENST00000431640 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
DDX56-204ENST00000431640 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
DDX56-204ENST00000431640 RGPD5Q99666 1765 aa16.5■□□□□ 0.23
DDX56-204ENST00000431640 RGPD1P0DJD0 1748 aa16.49■□□□□ 0.23
DDX56-204ENST00000431640 GCP02774 474 aa16.49■□□□□ 0.23
DDX56-204ENST00000431640 IL13P35225 146 aa16.49■□□□□ 0.23
DDX56-204ENST00000431640 ANP32EQ9BTT0 268 aa16.49■□□□□ 0.23
DDX56-204ENST00000431640 LMO7Q8WWI1 1683 aa16.49■□□□□ 0.23
DDX56-204ENST00000431640 PDE4AP27815 886 aa16.48■□□□□ 0.23
DDX56-204ENST00000431640 PRKAR2BP31323 418 aa16.48■□□□□ 0.23
DDX56-204ENST00000431640 ANP32AP39687 249 aaKnown RBP16.48■□□□□ 0.23
DDX56-204ENST00000431640 FRAT1Q92837 279 aaPredicted RBP16.48■□□□□ 0.23
DDX56-204ENST00000431640 NFE2L2Q16236 605 aa16.47■□□□□ 0.23
DDX56-204ENST00000431640 CLUAP1Q96AJ1 413 aa16.47■□□□□ 0.23
DDX56-204ENST00000431640 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
DDX56-204ENST00000431640 BACH2Q9BYV9 841 aa16.47■□□□□ 0.23
DDX56-204ENST00000431640 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
DDX56-204ENST00000431640 ZKSCAN2Q63HK3 967 aa16.46■□□□□ 0.23
DDX56-204ENST00000431640 RGPD2P0DJD1 1756 aa16.45■□□□□ 0.22
DDX56-204ENST00000431640 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
DDX56-204ENST00000431640 ARHGEF25Q86VW2 580 aa16.45■□□□□ 0.22
DDX56-204ENST00000431640 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
DDX56-204ENST00000431640 RTL1A6NKG5 1358 aa16.45■□□□□ 0.22
DDX56-204ENST00000431640 FLT4P35916 1363 aa16.45■□□□□ 0.22
DDX56-204ENST00000431640 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
DDX56-204ENST00000431640 MSH5O43196 834 aa16.44■□□□□ 0.22
DDX56-204ENST00000431640 HSPA1LP34931 641 aa16.44■□□□□ 0.22
DDX56-204ENST00000431640 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
DDX56-204ENST00000431640 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
DDX56-204ENST00000431640 PANK1Q8TE04 598 aa16.44■□□□□ 0.22
DDX56-204ENST00000431640 COG6Q9Y2V7 657 aa16.44■□□□□ 0.22
DDX56-204ENST00000431640 CPDO75976 1380 aa16.44■□□□□ 0.22
DDX56-204ENST00000431640 CAMTA1Q9Y6Y1 1673 aa16.43■□□□□ 0.22
DDX56-204ENST00000431640 HOXC9P31274 260 aa16.43■□□□□ 0.22
DDX56-204ENST00000431640 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
DDX56-204ENST00000431640 KCNH5Q8NCM2 988 aa16.43■□□□□ 0.22
DDX56-204ENST00000431640 ABCC6O95255 1503 aa16.43■□□□□ 0.22
DDX56-204ENST00000431640 LRP6O75581 1613 aa16.43■□□□□ 0.22
DDX56-204ENST00000431640 ALDH1L2Q3SY69 923 aa16.43■□□□□ 0.22
DDX56-204ENST00000431640 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms