RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 EVA1CP58658 441 aa21.38■■□□□ 1.01
PTCD1-204ENST00000430982 NUTM2GQ5VZR2 741 aa21.37■■□□□ 1.01
PTCD1-204ENST00000430982 ANO8Q9HCE9 1232 aaPredicted RBP21.36■■□□□ 1.01
PTCD1-204ENST00000430982 TESK2Q96S53 571 aa21.35■■□□□ 1.01
PTCD1-204ENST00000430982 CRB1P82279 1406 aa21.35■■□□□ 1.01
PTCD1-204ENST00000430982 UTRNP46939 3433 aa21.34■■□□□ 1.01
PTCD1-204ENST00000430982 DCAF8L1A6NGE4 600 aa21.34■■□□□ 1.01
PTCD1-204ENST00000430982 BCL9O00512 1426 aa21.34■■□□□ 1.01
PTCD1-204ENST00000430982 MYOM1P52179 1685 aa21.34■■□□□ 1.01
PTCD1-204ENST00000430982 WNK3Q9BYP7 1800 aa21.33■■□□□ 1.01
PTCD1-204ENST00000430982 SLC24A1O60721 1099 aa21.31■■□□□ 1
PTCD1-204ENST00000430982 GCP02774 474 aa21.31■■□□□ 1
PTCD1-204ENST00000430982 ABTB2Q8N961 1025 aa21.31■■□□□ 1
PTCD1-204ENST00000430982 TMC1Q8TDI8 760 aa21.31■■□□□ 1
PTCD1-204ENST00000430982 SLIT3O75094 1523 aa21.3■■□□□ 1
PTCD1-204ENST00000430982 PTGER2P43116 358 aa21.3■■□□□ 1
PTCD1-204ENST00000430982 BRD4O60885 1362 aaPredicted RBP21.29■■□□□ 1
PTCD1-204ENST00000430982 ZNF784Q8NCA9 323 aaPredicted RBP21.29■■□□□ 1
PTCD1-204ENST00000430982 PDGFDQ9GZP0 370 aaPredicted RBP21.29■■□□□ 1
PTCD1-204ENST00000430982 COL18A1P39060 1754 aa21.28■■□□□ 1
PTCD1-204ENST00000430982 AATKQ6ZMQ8 1374 aa21.28■■□□□ 1
PTCD1-204ENST00000430982 TMF1P82094 1093 aa21.28■■□□□ 1
PTCD1-204ENST00000430982 NLRP13Q86W25 1043 aa21.28■■□□□ 1
PTCD1-204ENST00000430982 PROM2Q8N271 834 aa21.28■■□□□ 1
PTCD1-204ENST00000430982 BCL11BQ9C0K0 894 aaPredicted RBP21.28■■□□□ 1
PTCD1-204ENST00000430982 USP6P35125 1406 aa21.28■■□□□ 1
PTCD1-204ENST00000430982 PTF1AQ7RTS3 328 aa21.27■■□□□ 1
PTCD1-204ENST00000430982 PUS7Q96PZ0 661 aaKnown RBP21.27■■□□□ 1
PTCD1-204ENST00000430982 ZNF692Q9BU19 519 aaPredicted RBP21.26■□□□□ 0.99
PTCD1-204ENST00000430982 SLC12A5Q9H2X9 1139 aa21.25■□□□□ 0.99
PTCD1-204ENST00000430982 AKAP12Q02952 1782 aa21.25■□□□□ 0.99
PTCD1-204ENST00000430982 KTN1Q86UP2 1357 aaKnown RBP21.23■□□□□ 0.99
PTCD1-204ENST00000430982 EIF4G2P78344 907 aaKnown RBP eCLIP21.23■□□□□ 0.99
PTCD1-204ENST00000430982 DDB1Q16531 1140 aa21.23■□□□□ 0.99
PTCD1-204ENST00000430982 HDGFL2Q7Z4V5 671 aaPredicted RBP21.23■□□□□ 0.99
PTCD1-204ENST00000430982 CHD4Q14839 1912 aa21.23■□□□□ 0.99
PTCD1-204ENST00000430982 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
PTCD1-204ENST00000430982 ZBTB7AO95365 584 aa21.22■□□□□ 0.99
PTCD1-204ENST00000430982 SGIP1Q9BQI5 828 aa21.22■□□□□ 0.99
PTCD1-204ENST00000430982 HSPA5P11021 654 aaKnown RBP21.21■□□□□ 0.99
PTCD1-204ENST00000430982 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
PTCD1-204ENST00000430982 MARCH10Q8NA82 808 aaPredicted RBP21.21■□□□□ 0.99
PTCD1-204ENST00000430982 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
PTCD1-204ENST00000430982 NLRP6P59044 892 aa21.2■□□□□ 0.98
PTCD1-204ENST00000430982 TERF2IPQ9NYB0 399 aa21.2■□□□□ 0.98
PTCD1-204ENST00000430982 PIK3C2AO00443 1686 aa21.2■□□□□ 0.98
PTCD1-204ENST00000430982 SYT17Q9BSW7 474 aa21.19■□□□□ 0.98
PTCD1-204ENST00000430982 WDR17Q8IZU2 1322 aa21.19■□□□□ 0.98
PTCD1-204ENST00000430982 PAPPAQ13219 1627 aa21.18■□□□□ 0.98
PTCD1-204ENST00000430982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.18■□□□□ 0.98
PTCD1-204ENST00000430982 CDCA7Q9BWT1 371 aaPredicted RBP21.18■□□□□ 0.98
PTCD1-204ENST00000430982 FHDC1Q9C0D6 1143 aaPredicted RBP21.18■□□□□ 0.98
PTCD1-204ENST00000430982 TTC21AQ8NDW8 1320 aa21.18■□□□□ 0.98
PTCD1-204ENST00000430982 MAP3K5Q99683 1374 aa21.18■□□□□ 0.98
PTCD1-204ENST00000430982 CD163L1Q9NR16 1453 aa21.18■□□□□ 0.98
PTCD1-204ENST00000430982 SLC15A2Q16348 729 aa21.17■□□□□ 0.98
PTCD1-204ENST00000430982 TXNRD1Q16881 649 aa21.17■□□□□ 0.98
PTCD1-204ENST00000430982 A0A1W2PP64 1363 aa21.16■□□□□ 0.98
PTCD1-204ENST00000430982 TOM1L2Q6ZVM7 507 aa21.16■□□□□ 0.98
PTCD1-204ENST00000430982 MTFR1LQ9H019 292 aa21.16■□□□□ 0.98
PTCD1-204ENST00000430982 AXIN2Q9Y2T1 843 aa21.16■□□□□ 0.98
PTCD1-204ENST00000430982 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
PTCD1-204ENST00000430982 STK32BQ9NY57 414 aa21.15■□□□□ 0.98
PTCD1-204ENST00000430982 ATF5Q9Y2D1 282 aaPredicted RBP21.15■□□□□ 0.98
PTCD1-204ENST00000430982 NHSQ6T4R5 1651 aa21.15■□□□□ 0.98
PTCD1-204ENST00000430982 C1QTNF8P60827 252 aa21.14■□□□□ 0.97
PTCD1-204ENST00000430982 RGPD5Q99666 1765 aa21.13■□□□□ 0.97
PTCD1-204ENST00000430982 TNS2Q63HR2 1409 aa21.12■□□□□ 0.97
PTCD1-204ENST00000430982 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
PTCD1-204ENST00000430982 MON2Q7Z3U7 1717 aa21.12■□□□□ 0.97
PTCD1-204ENST00000430982 ZBTB7CA1YPR0 619 aa21.12■□□□□ 0.97
PTCD1-204ENST00000430982 NME9Q86XW9 330 aa21.12■□□□□ 0.97
PTCD1-204ENST00000430982 ABCC6O95255 1503 aa21.12■□□□□ 0.97
PTCD1-204ENST00000430982 SENP3-EIF4A1A0A087X0R7 540 aa21.11■□□□□ 0.97
PTCD1-204ENST00000430982 ARHGEF25Q86VW2 580 aa21.11■□□□□ 0.97
PTCD1-204ENST00000430982 CARD10Q9BWT7 1032 aa21.11■□□□□ 0.97
PTCD1-204ENST00000430982 ANKRD36BQ8N2N9 1353 aa21.1■□□□□ 0.97
PTCD1-204ENST00000430982 SOX12O15370 315 aa21.1■□□□□ 0.97
PTCD1-204ENST00000430982 NFAT5O94916 1531 aa21.09■□□□□ 0.97
PTCD1-204ENST00000430982 COL24A1Q17RW2 1714 aa21.09■□□□□ 0.97
PTCD1-204ENST00000430982 CCDC7Q96M83 1385 aa21.08■□□□□ 0.96
PTCD1-204ENST00000430982 KCNH5Q8NCM2 988 aa21.07■□□□□ 0.96
PTCD1-204ENST00000430982 ARXQ96QS3 562 aa21.06■□□□□ 0.96
PTCD1-204ENST00000430982 USP31Q70CQ4 1352 aa21.06■□□□□ 0.96
PTCD1-204ENST00000430982 QSER1Q2KHR3 1735 aa21.05■□□□□ 0.96
PTCD1-204ENST00000430982 EXOC5O00471 708 aa21.04■□□□□ 0.96
PTCD1-204ENST00000430982 BTAF1O14981 1849 aa21.04■□□□□ 0.96
PTCD1-204ENST00000430982 IFFO2Q5TF58 517 aa21.02■□□□□ 0.96
PTCD1-204ENST00000430982 USP54Q70EL1 1684 aa21.02■□□□□ 0.95
PTCD1-204ENST00000430982 CEP350Q5VT06 3117 aa21.02■□□□□ 0.95
PTCD1-204ENST00000430982 COG3Q96JB2 828 aa21.01■□□□□ 0.95
PTCD1-204ENST00000430982 GOLGB1Q14789 3259 aaKnown RBP21.01■□□□□ 0.95
PTCD1-204ENST00000430982 SHANK3Q9BYB0 1731 aa21.01■□□□□ 0.95
PTCD1-204ENST00000430982 ZNF827Q17R98 1081 aa21■□□□□ 0.95
PTCD1-204ENST00000430982 NSD3Q9BZ95 1437 aa20.99■□□□□ 0.95
PTCD1-204ENST00000430982 CARD14Q9BXL6 1004 aa20.99■□□□□ 0.95
PTCD1-204ENST00000430982 CSB-PGBD3P0DP91 1061 aa20.98■□□□□ 0.95
PTCD1-204ENST00000430982 GGNBP2Q9H3C7 697 aa20.98■□□□□ 0.95
PTCD1-204ENST00000430982 FYB1O15117 783 aa20.97■□□□□ 0.95
PTCD1-204ENST00000430982 LRRC4BQ9NT99 713 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms